Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for PRPF6

Gene Name Gene ID Reads Annotation
PRPF6 ENSDARG00000091367 48 PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2575]










Genes with expression patterns similar to PRPF6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. PRPF6 ENSDARG00000091367 48 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2575]
2. si:ch211-255g12.5 si:ch211-255g12.5 7 1.818 - - - - - - 1.000 0.818 -
3. rcv1 rcv1 77 1.793 0.793 - - - - - 1.000 - -
4. ANGEL1 ENSDARG00000077567 38 1.775 - - 0.775 - - - 1.000 - - angel homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-111020-12]
5. NF1 NF1 62 1.766 - 0.815 - - - - 0.951 - -
6. tmeff1a ENSDARG00000008191 74 1.758 - - 0.805 - - - 0.953 - - transmembrane protein with EGF-like and two follistatin-like domains 1a [Source:ZFIN;Acc:ZDB-GENE-070912-294]
7. zbtb38 ENSDARG00000100607 17 1.739 - - - - - - 1.000 0.739 - zinc finger and BTB domain containing 38 [Source:ZFIN;Acc:ZDB-GENE-091204-308]
8. si:dkey-211a8.1 si:dkey-211a8.1 28 1.682 - 0.928 - - - - - 0.754 -
9. galr1 galr1 9 1.672 - - - 0.781 - - 0.891 - -
10. grin2ca ENSDARG00000078149 13 1.644 - - - 0.846 - - 0.798 - - glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca [Source:ZFIN;Acc:ZDB-GENE-070822-3]
11. rnf32 ENSDARG00000060035, ENSDARG00000116092 122 1.643 0.777 - - - - - 0.866 - - ring finger protein 32 [Source:ZFIN;Acc:ZDB-GENE-061013-39]
12. si:ch211-26b3.4 ENSDARG00000075491 50 1.637 - - 0.708 - - - 0.929 - - si:ch211-26b3.4 [Source:ZFIN;Acc:ZDB-GENE-081104-60]
13. s100b ENSDARG00000057598 41 1.635 - 0.743 - - - - 0.892 - - S100 calcium binding protein, beta (neural) [Source:ZFIN;Acc:ZDB-GENE-040718-290]
14. CR538726.1 ENSDARG00000097179 321 1.629 - - 0.785 - - - 0.844 - -
15. LRCH4 ENSDARG00000068258 22 1.629 0.793 - - - - - 0.836 - - leucine-rich repeats and calponin homology (CH) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060503-749]
16. C21H18orf54 C21H18orf54 174 1.62 0.857 0.763 - - - - - - -
17. si:dkey-4c15.6 si:dkey-4c15.6 6 1.608 0.754 0.854 - - - - - - -
18. PEG3_35 PEG3_35 52 1.607 0.754 - 0.853 - - - - - -
19. FBXO16 ENSDARG00000033949 10 1.591 0.793 - - - - - 0.798 - - F-box protein 16 [Source:ZFIN;Acc:ZDB-GENE-041015-747]
20. FUT9 FUT9 91 1.583 - - 0.742 - - - 0.841 - -
21. si:dkey-247i3.4 si:dkey-247i3.4 89 1.552 0.754 - - - - - 0.798 - -
22. c1qtnf4 ENSDARG00000024299 578 1.537 - - 0.825 - - - 0.712 - - C1q and TNF related 4 [Source:ZFIN;Acc:ZDB-GENE-050417-198]
23. CASKIN1 ENSDARG00000046107 201 1.534 - 0.724 0.810 - - - - - - CASK interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-071115-3]
24. ENTHD1 ENTHD1 235 1.52 - 0.783 - - - - 0.737 - -
25. fam175b fam175b 37 1.518 - - - 0.701 - - 0.817 - -
26. ube2r2 ENSDARG00000058740 83 1.477 - 0.769 - - - - - 0.708 - ubiquitin-conjugating enzyme E2R 2 [Source:ZFIN;Acc:ZDB-GENE-040718-344]
27. mibp_1 ENSDARG00000101362 193 1.435 0.729 - - - - - 0.706 - - muscle-specific beta 1 integrin binding protein [Source:ZFIN;Acc:ZDB-GENE-030404-1]
28. slc25a3a ENSDARG00000027424 11 1 - - - - - - 1.000 - - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3a [Source:ZFIN;Acc:ZDB-GENE-040426-1673]
29. rnasekb ENSDARG00000104458 13 1 - - - - - - 1.000 - - ribonuclease, RNase K b [Source:ZFIN;Acc:ZDB-GENE-060825-160]
30. itga6l ENSDARG00000056018 1 1 - - - - - - 1.000 - - integrin, alpha 6, like [Source:ZFIN;Acc:ZDB-GENE-040914-57]
31. si:ch1073-307h15.1 si:ch1073-307h15.1 2 1 - - - - - - 1.000 - -
32. ptk2ba ENSDARG00000022841 19 1 - - - - - - 1.000 - - protein tyrosine kinase 2 beta, a [Source:ZFIN;Acc:ZDB-GENE-080207-1]
33. si:ch211-113a14.19_4 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 18 1 - - - - - - 1.000 - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
34. si:dkey-20j10.2 si:dkey-20j10.2 8 1 - - - - - - 1.000 - -
35. si:ch1073-525h16.1 si:ch1073-525h16.1 1 1 - - - - - - 1.000 - -
36. tbkbp1 ENSDARG00000061473 24 1 - - - - - - 1.000 - - TBK1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-100203-1]
37. cntn2 ENSDARG00000000472, ENSDARG00000110222 3 1 - - - - - - 1.000 - - contactin 2 [Source:ZFIN;Acc:ZDB-GENE-990630-12]
38. TBC1D10C ENSDARG00000037408 18 1 - - - - - - 1.000 - - TBC1 domain family, member 10C [Source:ZFIN;Acc:ZDB-GENE-130125-1]
39. si:dkey-271j15.3 ENSDARG00000091627 88 1 - - - - - - 1.000 - - si:dkey-271j15.3 [Source:ZFIN;Acc:ZDB-GENE-100921-27]
40. kif20a ENSDARG00000044491 12 1 - - - - - - 1.000 - - kinesin family member 20A [Source:ZFIN;Acc:ZDB-GENE-050522-252]
41. pcdh2g8 2 1 - - - - - - 1.000 - - protocadherin 2 gamma 8
42. TRPC4_1 TRPC4_1 212 1 - - - - - - 1.000 - -
43. wu:fe38f03 wu:fe38f03 22 1 - - - - - - 1.000 - -
44. si:dkey-222p3.1 ENSDARG00000071103, ENSDARG00000109854 16 1 - - - - - - 1.000 - - si:dkey-222p3.1 [Source:ZFIN;Acc:ZDB-GENE-050208-374]
45. zgc:56231 ENSDARG00000010332 0 1 - - - - - - 1.000 - - zgc:56231 [Source:ZFIN;Acc:ZDB-GENE-040426-1914]
46. fhl1a ENSDARG00000071498, ENSDARG00000115132 164 1 - - - - - - 1.000 - - four and a half LIM domains 1a [Source:ZFIN;Acc:ZDB-GENE-040206-1]
47. si:dkey-189j19.1 si:dkey-189j19.1 0 1 - - - - - - 1.000 - -
48. tbr1a ENSDARG00000076259 341 1 - - - - - - 1.000 - - T-box, brain, 1a [Source:ZFIN;Acc:ZDB-GENE-060810-93]
49. NUDT13 ENSDARG00000057417, ENSDARG00000115835 5 1 - - - - - - 1.000 - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
50. CU469531.1 ENSDARG00000067872 0 1 - - - - - - 1.000 - -
51. pm20d1.1 ENSDARG00000037551 11 1 - - - - - - 1.000 - - peptidase M20 domain containing 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-051120-102]
52. BX323089.1 BX323089.1 0 1 - - - - - - 1.000 - -
53. AMDHD1 ENSDARG00000007366 89 1 1.000 - - - - - - - - amidohydrolase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28577]
54. si:ch211-198c19.3 ENSDARG00000095533 5 1 - - - - - - 1.000 - - si:ch211-198c19.3 [Source:ZFIN;Acc:ZDB-GENE-100922-226]
55. irak1 ENSDARG00000025949 19 1 - - - - - - 1.000 - - interleukin-1 receptor-associated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-071116-5]
56. si:ch211-277p15.1 2 1 - - - - - - 1.000 - - si:ch211-277p15.1, transcript variant X5
57. kif3cb ENSDARG00000079500 935 1 - - - - - - 1.000 - - kinesin family member 3Cb [Source:ZFIN;Acc:ZDB-GENE-080709-4]
58. zfp64 ENSDARG00000061147 44 1 - - - - - - 1.000 - - zinc finger protein 64 homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-031118-80]
59. BPIFC BPIFC 11 1 - - - - - - 1.000 - -
60. hapln4 ENSDARG00000018542 10 1 - - - - - - 1.000 - - hyaluronan and proteoglycan link protein 4 [Source:ZFIN;Acc:ZDB-GENE-060503-243]
61. PLCXD1_2 PLCXD1_2 9 1 - - - - - - 1.000 - -
62. BX936443.2 BX936443.2 28 1 - - - - - - 1.000 - -
63. si:ch211-113a14.18 ENSDARG00000051735 1253 1 - - - - - - 1.000 - - si:ch211-113a14.18 [Source:ZFIN;Acc:ZDB-GENE-121214-116]
64. BX005421.3 ENSDARG00000114309 7 1 - - - - - - 1.000 - -
65. ZNF512B ENSDARG00000071055 7 1 - - - - - - 1.000 - - zinc finger protein 512B [Source:HGNC Symbol;Acc:HGNC:29212]
66. ciz1a ENSDARG00000089781 20 1 - - - - - - 1.000 - - cdkn1a interacting zinc finger protein 1a [Source:ZFIN;Acc:ZDB-GENE-100922-222]
67. si:dkey-258f14.3 ENSDARG00000075974 9 1 - - - - - - 1.000 - - si:dkey-258f14.3 [Source:ZFIN;Acc:ZDB-GENE-050809-43]
68. scn4aa ENSDARG00000098738, ENSDARG00000113568 5 1 - - - - - - 1.000 - - sodium channel, voltage-gated, type IV, alpha, a [Source:ZFIN;Acc:ZDB-GENE-051201-2]
69. MAP3K2 ENSDARG00000062884 34 1 - - - - - - 1.000 - - mitogen-activated protein kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-120215-96]
70. USH1G USH1G 25 1 1.000 - - - - - - - -
71. sp5l ENSDARG00000115868 361 1 - - - - - - 1.000 - - Sp5 transcription factor-like [Source:ZFIN;Acc:ZDB-GENE-030131-2981]
72. xrra1 ENSDARG00000089578 18 1 - - - - - - 1.000 - - X-ray radiation resistance associated 1 [Source:ZFIN;Acc:ZDB-GENE-101216-2]
73. gpr19 ENSDARG00000102226 17 1 - - - - - - 1.000 - - G protein-coupled receptor 19 [Source:ZFIN;Acc:ZDB-GENE-040426-1295]
74. CMA1_4 CMA1_4 23 1 - - - - - - 1.000 - -
75. clock clock 32 1 - - - - - - 1.000 - -
76. hmgcra ENSDARG00000052734, ENSDARG00000109336 45 1 - - - - - - 1.000 - - 3-hydroxy-3-methylglutaryl-CoA reductase a [Source:ZFIN;Acc:ZDB-GENE-040401-2]
77. tbc1d22b ENSDARG00000026988 18 1 - - - - - - 1.000 - - TBC1 domain family, member 22B [Source:ZFIN;Acc:ZDB-GENE-091118-28]
78. NOTCH2NL NOTCH2NL 5 1 - - - - - - 1.000 - -
79. CIT_1 CIT_1 6 1 - - - - - - 1.000 - -
80. wu:fd60c08 wu:fd60c08 35 1 - - - - - - 1.000 - -
81. MYO9B ENSDARG00000078313 97 1 - - - - - - 1.000 - - myosin IXB [Source:HGNC Symbol;Acc:HGNC:7609]
82. zgc:195633_1 142 1 - - - - - - 1.000 - - zgc:195633
83. cnrip1b ENSDARG00000037337 39 1 - - - - - - 1.000 - - cannabinoid receptor interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-080722-33]
84. agrn_1 ENSDARG00000079388, ENSDARG00000110127 47 1 - - - - - - 1.000 - - agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
85. CABZ01036418.1 CABZ01036418.1 0 1 - - - - - - 1.000 - -
86. fam228a ENSDARG00000042936, ENSDARG00000114092 30 1 - - - - - - 1.000 - - family with sequence similarity 228, member A [Source:ZFIN;Acc:ZDB-GENE-041014-83]
87. PRR12 PRR12 38 1 - - - - - - 1.000 - -
88. rag2 ENSDARG00000052121 15 1 - - - - - - 1.000 - - recombination activating gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-235]
89. si:ch211-281p14.2 22 1 - - - - - - 1.000 - - si:ch211-281p14.2, transcript variant X2
90. cyp2k6 ENSDARG00000009874, ENSDARG00000098995 2 1 - - - - - - 1.000 - - cytochrome P450, family 2, subfamily K, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1571]
91. CNTNAP3 ENSDARG00000067824 25 1 - - - - - - 1.000 - - contactin associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-091113-51]
92. si:dkey-199m13.8 si:dkey-199m13.8 61 1 - - - - - - 1.000 - -
93. DBNDD1 DBNDD1 43 1 - - - - - - 1.000 - -
94. FNDC7_1 FNDC7_1 3 1 - - - - - - 1.000 - -
95. ZP2_1 ZP2_1 7 1 - - - - - - 1.000 - -
96. zeb1a ENSDARG00000016788 48 1 - - - - - - 1.000 - - zinc finger E-box binding homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-070912-124]
97. CABZ01064671.1 ENSDARG00000039935 21 1 - - - - - - 1.000 - -
98. zdhhc18a ENSDARG00000069807 8 1 - - - - - - 1.000 - - zinc finger, DHHC-type containing 18a [Source:ZFIN;Acc:ZDB-GENE-060929-424]
99. ptf1a ENSDARG00000014479 349 1 - - - - - - 1.000 - - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
100. si:ch211-223a21.3 ENSDARG00000104737 28 1 - - - - - - 1.000 - - si:ch211-223a21.3 [Source:ZFIN;Acc:ZDB-GENE-110913-50]

There are 821 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA