Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PRPF4B

Gene Name Gene ID Reads Annotation
PRPF4B ENSGALG00000043751 8266 pre-mRNA processing factor 4B [Source:HGNC Symbol;Acc:HGNC:17346]











Genes with expression patterns similar to PRPF4B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PRPF4B ENSGALG00000043751 8266 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 pre-mRNA processing factor 4B [Source:HGNC Symbol;Acc:HGNC:17346]
2. N4BP2 ENSGALG00000014281 3144 1.651 - - - - - - 0.803 - - 0.848 NEDD4 binding protein 2, transcript variant X6
3. RNF219 ENSGALG00000016911 4458 1.615 - - - - - - - 0.804 - 0.811 ring finger protein 219 [Source:HGNC Symbol;Acc:HGNC:20308]
4. PROM1 ENSGALG00000014496 2494 1.615 - - - - - - 0.767 - - 0.848 prominin 1 [Source:NCBI gene;Acc:422825]
5. KIF11 ENSGALG00000030597 5528 1.587 - - - - - - - 0.731 - 0.856 kinesin family member 11 [Source:NCBI gene;Acc:423809]
6. GCSH ENSGALG00000032679 29231 1.555 - - - - - - - 0.709 - 0.846 glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
7. SSR2 ENSGALG00000000764 32190 1.552 - - - - - - - 0.744 - 0.808 signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
8. FANCL ENSGALG00000030022 7423 1.55 - - - - - - - 0.729 - 0.821 FA complementation group L [Source:NCBI gene;Acc:421202]
9. SLK ENSGALG00000008318 2220 1.542 - - - - - - 0.761 - - 0.781 STE20 like kinase [Source:HGNC Symbol;Acc:HGNC:11088]
10. MKRN1 ENSGALG00000012852 6907 1.535 - - - - - - - 0.811 - 0.724 makorin ring finger protein 1 [Source:NCBI gene;Acc:395500]
11. GXYLT1 ENSGALG00000009532 5682 1.529 - - - - - - - 0.704 - 0.825 glucoside xylosyltransferase 1 [Source:NCBI gene;Acc:417789]
12. COG6 ENSGALG00000017035 2777 1.527 - - - - - - 0.705 - - 0.822 component of oligomeric golgi complex 6 [Source:HGNC Symbol;Acc:HGNC:18621]
13. TMX4 ENSGALG00000028587 3513 1.506 - - - - - - - 0.712 - 0.794 thioredoxin related transmembrane protein 4 [Source:NCBI gene;Acc:416729]
14. PWP1 ENSGALG00000012631 10536 1.504 - - - - - - - 0.732 - 0.772 PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
15. ZNF217 ZNF217 14511 1.495 - - - - - - - 0.726 - 0.769
16. PEX2 ENSGALG00000035752 4427 1.49 - - - - - - - 0.713 - 0.777 peroxisomal biogenesis factor 2 [Source:NCBI gene;Acc:420192]
17. RDX ENSGALG00000017153 6734 1.476 0.725 - - - - - - - - 0.751 radixin [Source:NCBI gene;Acc:395511]
18. C1H21ORF91 ENSGALG00000028290 5550 1.448 - - - - - - - 0.723 - 0.725 chromosome 1 open reading frame, human C21orf91 [Source:NCBI gene;Acc:395489]
19. TAF2 ENSGALG00000043193 6311 1.447 - - - - - - 0.703 0.744 - - TATA-box binding protein associated factor 2 [Source:NCBI gene;Acc:428389]
20. MYCBP2 ENSGALG00000016915 2374 1.445 - - - - - - 0.736 - - 0.709 MYC binding protein 2, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:23386]
21. NAP1L1 ENSGALG00000010238 14506 1.442 0.702 - - - - - - - - 0.740 nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
22. HMGB3 ENSGALG00000009071 12011 1.442 - - - - - - 0.701 0.741 - - high mobility group box 3 [Source:NCBI gene;Acc:396232]
23. HDHD1 HDHD1 2928 0.897 - - - - - - - - - 0.897
24. ENSGALG00000009044 ENSGALG00000009044 14492 0.889 - - - - - - - - - 0.889
25. CPSF2 ENSGALG00000010783 5236 0.888 - - - - - - - - - 0.888 cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]
26. SVIL ENSGALG00000007331 12032 0.874 - - - - - - - - - 0.874 supervillin [Source:HGNC Symbol;Acc:HGNC:11480]
27. NCAPG2 ENSGALG00000006525 2319 0.873 - - - - - - - - - 0.873 non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
28. MAN2A1 ENSGALG00000000255 4543 0.87 - - - - - - - - - 0.870 mannosidase alpha class 2A member 1 [Source:HGNC Symbol;Acc:HGNC:6824]
29. SNORA73 SNORA73 1644 0.868 - - - - - - - - - 0.868
30. MYOCD ENSGALG00000001021 351 0.867 - - - - - - - - - 0.867 myocardin [Source:NCBI gene;Acc:427790]
31. MB21D1 2460 0.866 - - - - - - - - - 0.866 Mab-21 domain containing 1
32. RAD50 ENSGALG00000006794 4308 0.866 - - - - - - - - - 0.866 RAD50 double strand break repair protein, transcript variant X4
33. MTERFD1 MTERFD1 3640 0.865 - - - - - - - - - 0.865
34. TPX2 ENSGALG00000006267 26087 0.864 - - - - - - - - - 0.864 TPX2, microtubule nucleation factor [Source:NCBI gene;Acc:395081]
35. STRADA ENSGALG00000000550 6912 0.864 - - - - - - - - - 0.864 STE20-related kinase adaptor alpha [Source:NCBI gene;Acc:419957]
36. KCNMA1 ENSGALG00000004980 261 0.863 - - - - - - - - - 0.863 potassium calcium-activated channel subfamily M alpha 1 [Source:NCBI gene;Acc:374065]
37. KMT2C 6306 0.862 - - - - - - - - - 0.862 lysine methyltransferase 2C, transcript variant X14
38. DCAF5 ENSGALG00000009463 1297 0.862 - - - - - - - - - 0.862 DDB1 and CUL4 associated factor 5 [Source:HGNC Symbol;Acc:HGNC:20224]
39. 5 5 4209 0.861 - - - - - - - - - 0.861
40. KAT6A ENSGALG00000003641 2631 0.86 - - - - - - - - - 0.860 lysine acetyltransferase 6A [Source:HGNC Symbol;Acc:HGNC:13013]
41. CLSPN ENSGALG00000002346 2590 0.859 - - - - - - - - - 0.859 claspin [Source:NCBI gene;Acc:428223]
42. NARS ENSGALG00000040506 9506 0.859 - - - - - - - - - 0.859 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
43. CCND1 ENSGALG00000007555 6715 0.859 - - - - - - - - - 0.859 cyclin D1 [Source:NCBI gene;Acc:396341]
44. SMC6 ENSGALG00000016467 3321 0.859 - - - - - - - - - 0.859 Gallus gallus structural maintenance of chromosomes 6 (SMC6), mRNA. [Source:RefSeq mRNA;Acc:NM_001321614]
45. TRPC4AP ENSGALG00000003147 3967 0.858 - - - - - - - - - 0.858 transient receptor potential cation channel subfamily C member 4 associated protein [Source:NCBI gene;Acc:428134]
46. TMEM128 ENSGALG00000014992 6567 0.858 - - - - - - - - - 0.858 transmembrane protein 128 [Source:NCBI gene;Acc:422845]
47. ETFDH ENSGALG00000009442 7671 0.858 - - - - - - - - - 0.858 electron transfer flavoprotein dehydrogenase [Source:NCBI gene;Acc:428724]
48. ENSGALG00000003515 ENSGALG00000003515 1003 0.857 - - - - - - - - - 0.857
49. AGGF1 ENSGALG00000004311 3011 0.857 - - - - - - - - - 0.857 angiogenic factor with G-patch and FHA domains 1, transcript variant X1
50. HOTAIRM1 HOTAIRM1 4335 0.857 - - - - - - - - - 0.857
51. RPL14 ENSGALG00000043379 239812 0.856 - - - - - - - - - 0.856 ribosomal protein L14
52. SNRNP48 ENSGALG00000013005 1468 0.856 - - - - - - - - - 0.856 small nuclear ribonucleoprotein U11/U12 subunit 48 [Source:HGNC Symbol;Acc:HGNC:21368]
53. CP ENSGALG00000030773 119 0.855 - - - - - - - - - 0.855 ceruloplasmin [Source:HGNC Symbol;Acc:HGNC:2295]
54. USP24 ENSGALG00000010805 576 0.854 - - - - - - - - - 0.854 ubiquitin specific peptidase 24 [Source:HGNC Symbol;Acc:HGNC:12623]
55. CAMSAP2 ENSGALG00000002145 6109 0.852 - - - - - - - - - 0.852 calmodulin regulated spectrin associated protein family member 2 [Source:HGNC Symbol;Acc:HGNC:29188]
56. MPP5 ENSGALG00000009581 724 0.852 - - - - - - - - - 0.852 membrane palmitoylated protein 5 [Source:NCBI gene;Acc:423281]
57. ZNF106 ENSGALG00000009081 1520 0.852 - - - - - - - - - 0.852 zinc finger protein 106 [Source:HGNC Symbol;Acc:HGNC:12886]
58. PGD ENSGALG00000002797 15115 0.852 - - - - - - - - - 0.852 phosphogluconate dehydrogenase [Source:NCBI gene;Acc:419450]
59. CCDC88A ENSGALG00000043587 2208 0.851 - - - - - - - - - 0.851 coiled-coil domain containing 88A [Source:HGNC Symbol;Acc:HGNC:25523]
60. TLL1 ENSGALG00000009567 1821 0.85 - - - - - - - - - 0.850 tolloid like 1 [Source:NCBI gene;Acc:395441]
61. DIAPH3 ENSGALG00000016937 1069 0.849 - - - - - - - - - 0.849 diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
62. AFG3L2 ENSGALG00000013853 1138 0.849 - - - - - - - - - 0.849 AFG3 like matrix AAA peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:315]
63. MSI1 ENSGALG00000007227 2279 0.848 - - - - - - - - - 0.848 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
64. GSTAL2 ENSGALG00000028551 4899 0.847 - - - - - - - - - 0.847 glutathione S-transferase alpha-like 2, transcript variant X4
65. WFDC1 ENSGALG00000005503 6152 0.847 - - - - - - - - - 0.847 WAP four-disulfide core domain 1 [Source:NCBI gene;Acc:395238]
66. BDP1 BDP1 3073 0.845 - - - - - - - - - 0.845
67. SPTSSA ENSGALG00000025755 3361 0.845 - - - - - - - - - 0.845 serine palmitoyltransferase small subunit A [Source:NCBI gene;Acc:423318]
68. TMEM243 ENSGALG00000006633 1592 0.845 - - - - - - - - - 0.845 transmembrane protein 243 [Source:HGNC Symbol;Acc:HGNC:21707]
69. ODZ3 ODZ3 2213 0.845 - - - - - - - - - 0.845
70. APBA3 ENSGALG00000000740 1249 0.845 - - - - - - - - - 0.845 amyloid beta precursor protein binding family A member 3 [Source:HGNC Symbol;Acc:HGNC:580]
71. C10orf118 C10orf118 762 0.844 - - - - - - - - - 0.844
72. PM20D2 ENSGALG00000015779 1301 0.844 - - - - - - - - - 0.844 peptidase M20 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21408]
73. LAMP2 ENSGALG00000008572 198 0.844 - - - - - - - - - 0.844 lysosomal associated membrane protein 2 [Source:NCBI gene;Acc:414800]
74. CHRAC1 ENSGALG00000040823 5695 0.844 - - - - - - - - - 0.844 chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
75. HAUS8 ENSGALG00000003727 351 0.843 - - - - - - - - - 0.843 HAUS augmin like complex subunit 8 [Source:HGNC Symbol;Acc:HGNC:30532]
76. PPM1E ENSGALG00000005061 2606 0.843 - - - - - - - - - 0.843 protein phosphatase, Mg2+/Mn2+ dependent 1E [Source:HGNC Symbol;Acc:HGNC:19322]
77. ENSGALG00000028992 ENSGALG00000028992 185077 0.843 - - - - - - - - - 0.843
78. UCHL3 ENSGALG00000016921 16208 0.843 - - - - - - - - - 0.843 ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
79. BRD1 ENSGALG00000029379 6047 0.842 - - - - - - - - - 0.842 bromodomain containing 1 [Source:NCBI gene;Acc:417731]
80. ACADL ENSGALG00000002891 8058 0.842 - - - - - - - - - 0.842 acyl-CoA dehydrogenase long chain [Source:NCBI gene;Acc:424005]
81. MYH1D ENSGALG00000027323 365 0.842 - - - - - - - - - 0.842 Gallus gallus myosin, heavy chain 1D, skeletal muscle (MYH1D), mRNA. [Source:RefSeq mRNA;Acc:NM_001319304]
82. SLC12A4 ENSGALG00000034179 5674 0.842 - - - - - - - - - 0.842 solute carrier family 12 member 4 [Source:HGNC Symbol;Acc:HGNC:10913]
83. MARK1 ENSGALG00000009483 10350 0.841 - - - - - - 0.841 - - - microtubule affinity regulating kinase 1 [Source:HGNC Symbol;Acc:HGNC:6896]
84. SYNCRIP ENSGALG00000015830 30555 0.841 - - - - - - - - - 0.841 synaptotagmin binding cytoplasmic RNA interacting protein [Source:NCBI gene;Acc:421831]
85. HSPE1 ENSGALG00000009070 87567 0.841 - - - - - - - - - 0.841 heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]
86. PER2 ENSGALG00000005521 1115 0.841 - - - - - - 0.841 - - - period circadian regulator 2 [Source:NCBI gene;Acc:374116]
87. SLC30A5 ENSGALG00000014787 5573 0.84 - - - - - - - - - 0.840 solute carrier family 30 member 5 [Source:NCBI gene;Acc:427173]
88. MTSS1 ENSGALG00000041969 1312 0.839 - - - - - - - - - 0.839 MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
89. RSPO2 ENSGALG00000030030 1271 0.839 - - - - - - - - - 0.839 R-spondin 2 [Source:NCBI gene;Acc:420271]
90. MAN1A2 451 0.839 - - - - - - - - - 0.839 mannosidase alpha class 1A member 2
91. PRDM4 ENSGALG00000012619 876 0.838 - - - - - - - - - 0.838 PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
92. SOX6 ENSGALG00000006074 102 0.838 - - - - - - - - - 0.838 Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]
93. C14orf80 C14orf80 1921 0.838 - - - - - - - - - 0.838
94. SPDL1 ENSGALG00000001942 4403 0.838 - - - - - - - - - 0.838 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
95. ARHGAP21 ENSGALG00000007721 3961 0.837 - - - - - - - - - 0.837 Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
96. LRRN4 ENSGALG00000008815 481 0.837 - - - - - - - - - 0.837 leucine rich repeat neuronal 4 [Source:HGNC Symbol;Acc:HGNC:16208]
97. RTN4R ENSGALG00000007732 1515 0.837 - - - - - - - - - 0.837 reticulon 4 receptor
98. PREX2 ENSGALG00000042354 134 0.837 - - - - - - - - - 0.837 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2
99. ALMS1 ENSGALG00000044620 570 0.837 - - - - - - - - - 0.837 ALMS1, centrosome and basal body associated protein, transcript variant X1
100. FRMD3 ENSGALG00000012577 999 0.837 - - - - - - - - - 0.837 FERM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24125]

There are 464 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA