Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PRPF39

Gene Name Gene ID Reads Annotation
PRPF39 184 pre-mRNA processing factor 39, transcript variant X7











Genes with expression patterns similar to PRPF39

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PRPF39 184 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 pre-mRNA processing factor 39, transcript variant X7
2. LAMP1 ENSGALG00000037697 247 1.673 - - - - - 0.783 0.890 - - - lysosomal associated membrane protein 1 [Source:NCBI gene;Acc:396220]
3. CYP2H1 CYP2H1 363 1.61 - - - - - 0.834 0.776 - - -
4. ENDOV 121 1.579 - - - - - - 0.871 - - 0.708 endonuclease V
5. TMEM200B ENSGALG00000024318 117 1.568 - - - - - 0.781 - - - 0.787 transmembrane protein 200B [Source:HGNC Symbol;Acc:HGNC:33785]
6. ENSGALG00000012463 ENSGALG00000012463 242 0.935 - - - - - - 0.935 - - -
7. ATP6V1AL ENSGALG00000000048 21 0.925 - - - - - - 0.925 - - - ATPase H+ transporting V1 subunit A-like, transcript variant X2
8. NPTN ENSGALG00000001741 481 0.911 - - - - - - 0.911 - - - neuroplastin [Source:NCBI gene;Acc:415316]
9. VTI1B ENSGALG00000009526 133 0.902 - - - - - - 0.902 - - - vesicle transport through interaction with t-SNAREs 1B [Source:HGNC Symbol;Acc:HGNC:17793]
10. KYNU ENSGALG00000012418 353 0.897 - - - - - - 0.897 - - - kynureninase, transcript variant X3
11. NAPRT1 NAPRT1 227 0.897 - - - - - - 0.897 - - -
12. DCBLD1 ENSGALG00000014907 19 0.895 - - - - - - 0.895 - - - discoidin, CUB and LCCL domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21479]
13. MUC5B MUC5B 62 0.895 - - - - - - 0.895 - - -
14. ENSGALG00000023475 ENSGALG00000023475 19 0.895 - - - - - - 0.895 - - -
15. ANO3 ENSGALG00000013311 16 0.895 - - - - - - 0.895 - - - anoctamin 3 [Source:NCBI gene;Acc:422968]
16. C18H17ORF67 ENSGALG00000024428 10 0.895 - - - - - - 0.895 - - - chromosome 18 open reading frame, human C17orf67 [Source:NCBI gene;Acc:417400]
17. TEX2 ENSGALG00000003496 23 0.895 - - - - - - 0.895 - - - testis expressed 2 [Source:HGNC Symbol;Acc:HGNC:30884]
18. LRRC2 ENSGALG00000013634 69 0.892 - - - - - - 0.892 - - - leucine rich repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:14676]
19. POFUT1 ENSGALG00000006594 367 0.892 - - - - - - 0.892 - - - protein O-fucosyltransferase 1 [Source:NCBI gene;Acc:395070]
20. FAM82B FAM82B 374 0.89 - - - - - - 0.890 - - -
21. KIAA1217 ENSGALG00000007766 144 0.888 - - - - - - - - - 0.888 KIAA1217 [Source:HGNC Symbol;Acc:HGNC:25428]
22. MAP3K1 ENSGALG00000014718 60 0.885 - - - - - - 0.885 - - - mitogen-activated protein kinase kinase kinase 1 [Source:HGNC Symbol;Acc:HGNC:6848]
23. SVOPL ENSGALG00000012812 27 0.884 - - - - - - 0.884 - - - SVOP like [Source:HGNC Symbol;Acc:HGNC:27034]
24. MOCOS ENSGALG00000013149 25 0.882 - - - - - - 0.882 - - - molybdenum cofactor sulfurase [Source:HGNC Symbol;Acc:HGNC:18234]
25. CREB5 ENSGALG00000038265 92 0.882 - - - - - - - - - 0.882 cAMP responsive element binding protein 5 [Source:HGNC Symbol;Acc:HGNC:16844]
26. NKD1 ENSGALG00000003767 76 0.88 - - - - - - 0.880 - - - naked cuticle homolog 1 [Source:HGNC Symbol;Acc:HGNC:17045]
27. HTR2C ENSGALG00000005853 90 0.879 - - - - - - 0.879 - - - Gallus gallus 5-hydroxytryptamine receptor 2C (HTR2C), mRNA. [Source:RefSeq mRNA;Acc:NM_001318421]
28. KCTD5 ENSGALG00000006423 192 0.878 - - - - - - 0.878 - - - potassium channel tetramerization domain containing 5 [Source:HGNC Symbol;Acc:HGNC:21423]
29. TDRD5 ENSGALG00000033634 40 0.876 - - - - - - 0.876 - - - tudor domain containing 5 [Source:HGNC Symbol;Acc:HGNC:20614]
30. CPNE1 ENSGALG00000040856 610 0.873 - - - - - - 0.873 - - - copine 1 [Source:NCBI gene;Acc:419134]
31. TP53I3 ENSGALG00000016502 178 0.873 - - - - - - 0.873 - - - tumor protein p53 inducible protein 3 [Source:HGNC Symbol;Acc:HGNC:19373]
32. ENSGALG00000029120 ENSGALG00000029120 73 0.873 - - - - - - 0.873 - - -
33. NR5A2 ENSGALG00000002182 392 0.872 - - - - - - - - - 0.872 nuclear receptor subfamily 5 group A member 2 [Source:NCBI gene;Acc:395961]
34. C9orf171 C9orf171 35 0.872 - - - - - - 0.872 - - -
35. NCOA6 ENSGALG00000001182 83 0.871 - - - - - - 0.871 - - - nuclear receptor coactivator 6 [Source:HGNC Symbol;Acc:HGNC:15936]
36. ENSGALG00000026371 ENSGALG00000026371 106 0.87 - - - - - - 0.870 - - -
37. BLOC1S2 ENSGALG00000005794 544 0.87 - - - - - - - - - 0.870 biogenesis of lysosomal organelles complex 1 subunit 2 [Source:NCBI gene;Acc:423768]
38. TSPAN14 ENSGALG00000002414 69 0.87 - - - - - - 0.870 - - - tetraspanin 14 [Source:NCBI gene;Acc:423624]
39. TRIM71 ENSGALG00000019622 1633 0.869 - - - - - - 0.869 - - - tripartite motif containing 71 [Source:NCBI gene;Acc:428445]
40. ANKS1B ENSGALG00000011549 440 0.869 - - - - - - 0.869 - - - ankyrin repeat and sterile alpha motif domain containing 1B [Source:NCBI gene;Acc:417927]
41. RIPPLY2 ENSGALG00000015845 34 0.869 - - - - - - 0.869 - - - ripply transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:21390]
42. LOC100857820 ENSGALG00000001824 16 0.869 - - - - - - 0.869 - - - uncharacterized LOC100857820
43. FBXL18 ENSGALG00000004611 97 0.864 - - - - - - 0.864 - - - F-box and leucine rich repeat protein 18 [Source:NCBI gene;Acc:416484]
44. CPNE7 ENSGALG00000000507 54 0.863 - - - - - - 0.863 - - - copine 7 [Source:HGNC Symbol;Acc:HGNC:2320]
45. ENSGALG00000027352 ENSGALG00000027352 69 0.862 - - - - - 0.862 - - - -
46. YTHDC1 ENSGALG00000035906 471 0.861 - - - - - - 0.861 - - - YTH domain containing 1 [Source:NCBI gene;Acc:422656]
47. RSFR 61 0.86 - - - - - - 0.860 - - - leukocyte ribonuclease A-2
48. RELN ENSGALG00000008193 43 0.859 - - - - - - 0.859 - - - reelin [Source:NCBI gene;Acc:427850]
49. TSPAN4 ENSGALG00000006837 150 0.856 - - - - - - 0.856 - - - tetraspanin 4 [Source:HGNC Symbol;Acc:HGNC:11859]
50. LMCD1 ENSGALG00000008349 928 0.853 - - - - - - 0.853 - - - LIM and cysteine rich domains 1 [Source:HGNC Symbol;Acc:HGNC:6633]
51. FAM21A FAM21A 251 0.853 - - - - - - 0.853 - - -
52. RCL1 ENSGALG00000015024 133 0.851 - - - - - - 0.851 - - - RNA terminal phosphate cyclase like 1 [Source:HGNC Symbol;Acc:HGNC:17687]
53. FGB ENSGALG00000009262 1169 0.85 - - - - - - 0.850 - - - fibrinogen beta chain [Source:NCBI gene;Acc:373926]
54. ZNF385B ENSGALG00000009012 290 0.849 - - - - - - - - - 0.849 zinc finger protein 385B [Source:HGNC Symbol;Acc:HGNC:26332]
55. ADCY2 ENSGALG00000013060 164 0.849 - - - - - 0.849 - - - - adenylate cyclase 2 [Source:HGNC Symbol;Acc:HGNC:233]
56. CCNJ ENSGALG00000006955 47 0.848 - - - - - 0.848 - - - - cyclin J [Source:HGNC Symbol;Acc:HGNC:23434]
57. ENSGALG00000020753 ENSGALG00000020753 159 0.847 - - - - - - 0.847 - - -
58. PCGF2 ENSGALG00000018815 38 0.845 - - - - - - 0.845 - - - polycomb group ring finger 2 [Source:NCBI gene;Acc:425919]
59. BBS12 142 0.845 - - - - - - 0.845 - - - Bardet-Biedl syndrome 12
60. MAFK ENSGALG00000004189 1195 0.841 - - - - - - - - - 0.841 MAF bZIP transcription factor K [Source:NCBI gene;Acc:395518]
61. ELK4 ENSGALG00000042137 69 0.841 - - - - - - 0.841 - - - ELK4, ETS transcription factor
62. GHDC ENSGALG00000003333 178 0.841 - - - - - - 0.841 - - - GH3 domain containing [Source:HGNC Symbol;Acc:HGNC:24438]
63. PHTF2 ENSGALG00000008335 722 0.841 - - - - - - 0.841 - - - putative homeodomain transcription factor 2 [Source:NCBI gene;Acc:417728]
64. ENKD1 ENSGALG00000001204 362 0.841 - - - - - - 0.841 - - - enkurin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25246]
65. PALM2 ENSGALG00000015655 20 0.84 - - - - - 0.840 - - - - paralemmin 2 [Source:HGNC Symbol;Acc:HGNC:15845]
66. ENSGALG00000014900 ENSGALG00000014900 335 0.839 - - - - - - 0.839 - - -
67. ZDHHC5 ENSGALG00000007362 296 0.839 - - - - - - 0.839 - - - zinc finger DHHC-type containing 5 [Source:NCBI gene;Acc:423130]
68. ENTHD2 684 0.838 - - - - - 0.838 - - - - ENTH domain containing 2, transcript variant X1
69. HMGCS2 ENSGALG00000002960 54 0.837 - - - - - 0.837 - - - - 3-hydroxy-3-methylglutaryl-CoA synthase 2 [Source:HGNC Symbol;Acc:HGNC:5008]
70. GRIA2 ENSGALG00000009405 275 0.836 - - - - - - 0.836 - - - glutamate ionotropic receptor AMPA type subunit 2 [Source:NCBI gene;Acc:414894]
71. CPA6 ENSGALG00000041918 54 0.836 - - - - - 0.836 - - - - carboxypeptidase A6 [Source:NCBI gene;Acc:420171]
72. IFT27 ENSGALG00000042990 221 0.835 - - - - - - 0.835 - - - intraflagellar transport 27 [Source:NCBI gene;Acc:418053]
73. ST3GAL3 ENSGALG00000010083 935 0.835 - - - - - - - - - 0.835 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 [Source:NCBI gene;Acc:424572]
74. SLC35F2 ENSGALG00000017167 1027 0.834 - - - - - 0.834 - - - - solute carrier family 35 member F2 [Source:HGNC Symbol;Acc:HGNC:23615]
75. FAM117B ENSGALG00000008466 81 0.834 - - - - - - - - - 0.834 family with sequence similarity 117 member B [Source:HGNC Symbol;Acc:HGNC:14440]
76. KDELC2 ENSGALG00000017158 479 0.834 - - - - - - 0.834 - - - KDEL motif containing 2 [Source:HGNC Symbol;Acc:HGNC:28496]
77. HINFP ENSGALG00000006806 15 0.834 - - - - - 0.834 - - - - histone H4 transcription factor [Source:HGNC Symbol;Acc:HGNC:17850]
78. SERPINA12 SERPINA12 3 0.834 - - - - - 0.834 - - - -
79. ANGPTL3 ENSGALG00000010978 335 0.834 - - - - - 0.834 - - - - angiopoietin like 3 [Source:NCBI gene;Acc:100189558]
80. ENSGALG00000028413 ENSGALG00000028413 551 0.834 - - - - - 0.834 - - - -
81. GPR88 ENSGALG00000005252 4 0.834 - - - - - 0.834 - - - - G protein-coupled receptor 88 [Source:HGNC Symbol;Acc:HGNC:4539]
82. GLOD5 ENSGALG00000025991 17 0.834 - - - - - 0.834 - - - - glyoxalase domain containing 5 [Source:HGNC Symbol;Acc:HGNC:33358]
83. gga-mir-6703 ENSGALG00000029026 124 0.834 - - - - - 0.834 - - - - gga-mir-6703 [Source:miRBase;Acc:MI0022525]
84. ANKRD33B ENSGALG00000038328 22 0.833 - - - - - 0.833 - - - - ankyrin repeat domain 33B [Source:HGNC Symbol;Acc:HGNC:35240]
85. SNORD2 SNORD2 51 0.833 - - - - - - 0.833 - - -
86. AGL ENSGALG00000005407 93 0.832 - - - - - - 0.832 - - - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase [Source:HGNC Symbol;Acc:HGNC:321]
87. MLF1 ENSGALG00000009654 619 0.832 - - - - - - 0.832 - - - myeloid leukemia factor 1, transcript variant X3
88. ENSGALG00000026592 ENSGALG00000026592 4331 0.832 - - - - - 0.832 - - - -
89. ENSGALG00000001515 ENSGALG00000001515 833 0.831 - - - - - - 0.831 - - -
90. GYPC ENSGALG00000011566 99 0.83 - - - - - - - - - 0.830 glycophorin C (Gerbich blood group) [Source:NCBI gene;Acc:424230]
91. CCDC34 ENSGALG00000012194 1377 0.83 - - - - - - 0.830 - - - coiled-coil domain containing 34
92. MRPL13 ENSGALG00000041863 643 0.83 - - - - - - - - - 0.830 mitochondrial ribosomal protein L13 [Source:NCBI gene;Acc:420356]
93. P2RY1 ENSGALG00000010357 11 0.83 - - - - - 0.830 - - - - purinergic receptor P2Y1 [Source:NCBI gene;Acc:396275]
94. ARHGAP15 ENSGALG00000012421 58 0.828 - - - - - - 0.828 - - - Rho GTPase activating protein 15 [Source:NCBI gene;Acc:424303]
95. SLC45A4 ENSGALG00000034971 142 0.823 - - - - - 0.823 - - - - solute carrier family 45 member 4 [Source:HGNC Symbol;Acc:HGNC:29196]
96. CADM2 ENSGALG00000043393 810 0.823 - - - - - - 0.823 - - - cell adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:29849]
97. RPL3L ENSGALG00000005458 9 0.823 - - - - - 0.823 - - - - ribosomal protein L3 like [Source:NCBI gene;Acc:416542]
98. TGFBRAP1 ENSGALG00000016795 81 0.823 - - - - - - - - - 0.823 transforming growth factor beta receptor associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16836]
99. MAP2K1 ENSGALG00000007687 250 0.822 - - - - - 0.822 - - - - mitogen-activated protein kinase kinase 1 [Source:NCBI gene;Acc:415549]
100. PDE4D ENSGALG00000014727 53 0.819 - - - - - - 0.819 - - - phosphodiesterase 4D [Source:HGNC Symbol;Acc:HGNC:8783]

There are 248 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA