Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PRPF38B

Gene Name Gene ID Reads Annotation
PRPF38B ENSGALG00000001972 2009 pre-mRNA processing factor 38B











Genes with expression patterns similar to PRPF38B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PRPF38B ENSGALG00000001972 2009 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 pre-mRNA processing factor 38B
2. WHSC1 1712 1.851 - - 0.914 - - - - - - 0.937 Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
3. CNTRL ENSGALG00000001513 1773 1.82 - - 0.883 - - - - - - 0.937 centriolin [Source:NCBI gene;Acc:417121]
4. HYAL3 ENSGALG00000029000 712 1.797 - - 0.879 - - - - - - 0.918 hyaluronoglucosaminidase 3 [Source:HGNC Symbol;Acc:HGNC:5322]
5. ATP6V0C ENSGALG00000009229 125870 1.789 - - 0.894 - - - - - - 0.895 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
6. SLK ENSGALG00000008318 2220 1.779 - - 0.942 - - - - - - 0.837 STE20 like kinase [Source:HGNC Symbol;Acc:HGNC:11088]
7. SMC4 ENSGALG00000009553 15715 1.772 - - 0.864 - - - - - - 0.908 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
8. TWSG1 ENSGALG00000008400 1869 1.753 - - 0.916 - - - - - - 0.837 twisted gastrulation BMP signaling modulator 1 [Source:NCBI gene;Acc:374024]
9. RAD50 ENSGALG00000006794 4308 1.726 - - 0.846 - - - - - - 0.880 RAD50 double strand break repair protein, transcript variant X4
10. CPT2 ENSGALG00000010681 3211 1.723 - - 0.805 - - - - - - 0.918 carnitine palmitoyltransferase 2 [Source:NCBI gene;Acc:424649]
11. GTF2E1 ENSGALG00000042320 7712 1.722 - - 0.866 - - - - - - 0.856 general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]
12. CAMSAP1 ENSGALG00000001692 2617 1.721 - - 0.911 - - - - - - 0.810 calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
13. AGGF1 ENSGALG00000004311 3011 1.718 - - 0.792 - - - - - - 0.926 angiogenic factor with G-patch and FHA domains 1, transcript variant X1
14. NAA30 ENSGALG00000012098 4681 1.714 - - 0.834 - - - - - - 0.880 N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
15. UBE2E3 ENSGALG00000020793 9517 1.699 - - 0.863 - - - - - - 0.836 ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
16. SLC39A6 ENSGALG00000013209 1754 1.69 - - 0.848 - - - - - - 0.842 solute carrier family 39 member 6 [Source:HGNC Symbol;Acc:HGNC:18607]
17. TMLHE ENSGALG00000007443 3619 1.682 - - 0.785 - - - - - - 0.897 trimethyllysine hydroxylase, epsilon [Source:NCBI gene;Acc:422296]
18. HDAC2 ENSGALG00000014991 23458 1.681 - - 0.754 - - - - - - 0.927 histone deacetylase 2 [Source:NCBI gene;Acc:395635]
19. SMC5 ENSGALG00000015118 1799 1.677 - - 0.842 - - - - - - 0.835 structural maintenance of chromosomes 5 [Source:NCBI gene;Acc:431608]
20. SPDL1 ENSGALG00000001942 4403 1.671 - - 0.779 - - - - - - 0.892 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
21. WBP4 ENSGALG00000016949 5858 1.67 - - 0.857 - - - - - - 0.813 WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
22. SLC12A4 ENSGALG00000034179 5674 1.664 - - 0.825 - - - - - - 0.839 solute carrier family 12 member 4 [Source:HGNC Symbol;Acc:HGNC:10913]
23. CCNA2 ENSGALG00000011881 2574 1.659 - - 0.813 - - - - - - 0.846 cyclin A2 [Source:NCBI gene;Acc:396172]
24. QSER1 ENSGALG00000012030 4490 1.642 - - 0.868 - - - - - - 0.774 glutamine and serine rich 1 [Source:NCBI gene;Acc:421599]
25. ZC3H11A ENSGALG00000000541 2712 1.64 - - 0.881 - - - - - - 0.759 zinc finger CCCH-type containing 11A [Source:NCBI gene;Acc:421172]
26. SP3 ENSGALG00000031796 8997 1.633 - - 0.883 - - - - - - 0.750 Sp3 transcription factor [Source:NCBI gene;Acc:395302]
27. RBX1 ENSGALG00000011993 26090 1.631 - - 0.812 - - - - - - 0.819 ring-box 1 [Source:NCBI gene;Acc:418001]
28. TIAR TIAR 2471 1.629 - - 0.891 - - - - - - 0.738
29. CKAP2 ENSGALG00000017025 25020 1.624 - - 0.723 - - - - - - 0.901 cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
30. FZD6 ENSGALG00000030626 3336 1.622 - - 0.771 - - - - - - 0.851 frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
31. TCOF1 ENSGALG00000005535 24554 1.61 - - 0.761 - - - - - - 0.849 treacle ribosome biogenesis factor 1 [Source:NCBI gene;Acc:416276]
32. HNRNPLL ENSGALG00000008504 14719 1.602 - - 0.808 - - - - - - 0.794 heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]
33. FECH ENSGALG00000038461 3491 1.601 - - 0.815 - - - - - - 0.786 ferrochelatase [Source:NCBI gene;Acc:374020]
34. NUBP1 ENSGALG00000007241 3791 1.599 - - 0.864 - - - - - - 0.735 nucleotide binding protein 1 [Source:NCBI gene;Acc:416634]
35. MYCBP2 ENSGALG00000016915 2374 1.598 - - 0.817 - - - - - - 0.781 MYC binding protein 2, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:23386]
36. UBN1 ENSGALG00000031416 2848 1.594 - - 0.874 - - - - - - 0.720 ubinuclein 1 [Source:NCBI gene;Acc:416398]
37. ERCC6 ENSGALG00000006254 3452 1.585 - - 0.763 - - - - - - 0.822 ERCC excision repair 6, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:3438]
38. RBBP8 ENSGALG00000014982 3255 1.583 - - 0.860 - - - - - - 0.723 RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
39. BZW2 ENSGALG00000010809 29213 1.579 - - 0.720 - - - - - - 0.859 basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
40. EAPP ENSGALG00000010007 5080 1.574 - - 0.814 - - - - - - 0.760 E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
41. HMGCR ENSGALG00000014948 2514 1.567 - - - - - - - 0.782 - 0.785 3-hydroxy-3-methylglutaryl-CoA reductase [Source:NCBI gene;Acc:395145]
42. RAD18 ENSGALG00000008368 7214 1.565 - - 0.748 - - - - - - 0.817 RAD18, E3 ubiquitin protein ligase [Source:NCBI gene;Acc:416114]
43. FTD FTD 3041 1.562 - - 0.841 - - - - - - 0.721
44. TPM4 ENSGALG00000002563 15621 1.555 - - 0.848 - - - - - - 0.707 tropomyosin 4 [Source:HGNC Symbol;Acc:HGNC:12013]
45. ADIPOR2 ENSGALG00000035533 6523 1.553 - - 0.808 - - - - - - 0.745 adiponectin receptor 2 [Source:NCBI gene;Acc:418155]
46. NDC80 ENSGALG00000014801 3237 1.544 - - 0.744 - - - - - - 0.800 NDC80, kinetochore complex component [Source:NCBI gene;Acc:395134]
47. TPX2 ENSGALG00000006267 26087 1.534 - - 0.705 - - - - - - 0.829 TPX2, microtubule nucleation factor [Source:NCBI gene;Acc:395081]
48. RPL26 RPL26 343071 1.529 - - 0.777 - - - - - - 0.752
49. BAZ1A ENSGALG00000010030 3626 1.495 - - 0.712 - - - - - - 0.783 bromodomain adjacent to zinc finger domain 1A [Source:HGNC Symbol;Acc:HGNC:960]
50. GID8 ENSGALG00000005700 3992 1.481 - - 0.763 - - - - - - 0.718 GID complex subunit 8 homolog [Source:NCBI gene;Acc:419235]
51. TBX3 ENSGALG00000036043 2888 1.428 - - 0.701 - - - - - - 0.727 T-box 3 [Source:NCBI gene;Acc:374202]
52. PCDH17 ENSGALG00000016941 1006 0.953 - - 0.953 - - - - - - - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
53. GGT7 ENSGALG00000001062 476 0.947 - - 0.947 - - - - - - - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
54. SMOC2 ENSGALG00000011205 340 0.945 - - 0.945 - - - - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
55. CLEC16A ENSGALG00000007167 66 0.941 - - 0.941 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
56. FREM3 ENSGALG00000020561 1824 0.94 - - - - - - - - - 0.940 FRAS1 related extracellular matrix 3
57. MLLT3 ENSGALG00000015078 502 0.94 - - 0.940 - - - - - - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
58. ACOX1 ENSGALG00000002159 2953 0.939 - - 0.939 - - - - - - - acyl-CoA oxidase 1 [Source:NCBI gene;Acc:417366]
59. SMARCAD1 ENSGALG00000037339 149 0.938 - - 0.938 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
60. BBS5 ENSGALG00000009846 344 0.936 - - 0.936 - - - - - - - Bardet-Biedl syndrome 5 [Source:NCBI gene;Acc:424165]
61. SGCE ENSGALG00000009670 3070 0.936 - - 0.936 - - - - - - - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
62. BBX ENSGALG00000015353 1281 0.936 - - 0.936 - - - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
63. TUBGCP3 ENSGALG00000016836 332 0.935 - - 0.935 - - - - - - - tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]
64. BRD1 ENSGALG00000029379 6047 0.935 - - - - - - - - - 0.935 bromodomain containing 1 [Source:NCBI gene;Acc:417731]
65. ESRRG ENSGALG00000009645 2783 0.935 - - - - - - - - - 0.935 estrogen related receptor gamma [Source:NCBI gene;Acc:421357]
66. ARHGAP21 ENSGALG00000007721 3961 0.935 - - - - - - - - - 0.935 Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
67. TRIM13 ENSGALG00000017011 92 0.935 - - 0.935 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
68. RRN3 ENSGALG00000041989 3934 0.935 - - 0.935 - - - - - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
69. MBSP MBSP 5634 0.935 - - 0.935 - - - - - - -
70. ASB3 ENSGALG00000008176 5422 0.934 - - - - - - - - - 0.934 ankyrin repeat and SOCS box containing 3 [Source:NCBI gene;Acc:428545]
71. ATF7IP ENSGALG00000011814 1571 0.934 - - 0.934 - - - - - - - activating transcription factor 7 interacting protein [Source:NCBI gene;Acc:417966]
72. FSTL4 ENSGALG00000031487 529 0.934 - - - - - - - - - 0.934 follistatin like 4 [Source:NCBI gene;Acc:395163]
73. ABCE1 ENSGALG00000009961 958 0.933 - - 0.933 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
74. IDS ENSGALG00000009154 1177 0.933 - - - - - - - - - 0.933 iduronate 2-sulfatase [Source:NCBI gene;Acc:422392]
75. ITSN2 ENSGALG00000016504 651 0.933 - - - - - - - - - 0.933 intersectin 2 [Source:HGNC Symbol;Acc:HGNC:6184]
76. LRRN4 ENSGALG00000008815 481 0.932 - - - - - - - - - 0.932 leucine rich repeat neuronal 4 [Source:HGNC Symbol;Acc:HGNC:16208]
77. FBXO25 ENSGALG00000016359 1547 0.932 - - - - - - - - - 0.932 F-box protein 25 [Source:HGNC Symbol;Acc:HGNC:13596]
78. ASAP2 ENSGALG00000016419 1393 0.932 - - - - - - - - - 0.932 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
79. MRPL50 ENSGALG00000015543 11649 0.932 - - - - - - - - - 0.932 mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
80. PLA2G15 ENSGALG00000041787 762 0.932 - - - - - - - - - 0.932 phospholipase A2 group XV [Source:HGNC Symbol;Acc:HGNC:17163]
81. ANKRD17 ENSGALG00000011642 3192 0.931 - - - - - - - - - 0.931 ankyrin repeat domain 17 [Source:HGNC Symbol;Acc:HGNC:23575]
82. CXADR ENSGALG00000015701 96 0.931 - - - - - - - - - 0.931 coxsackie virus and adenovirus receptor, transcript variant X2
83. CHAMP1 ENSGALG00000016813 508 0.93 - - 0.930 - - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
84. SSH1 ENSGALG00000004928 222 0.93 - - - - - - - - - 0.930 slingshot protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:30579]
85. PM20D2 ENSGALG00000015779 1301 0.93 - - - - - - - - - 0.930 peptidase M20 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21408]
86. WDSUB1 ENSGALG00000012574 2038 0.93 - - - - - - - - - 0.930 WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
87. PTDSS2 ENSGALG00000004300 682 0.93 - - 0.930 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
88. CDH1-A CDH1-A 343 0.93 - - - - - - - - - 0.930
89. MPRIP ENSGALG00000004798 6700 0.93 - - - - - - - - - 0.930 myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
90. SLC3A1 ENSGALG00000009973 608 0.93 - - 0.930 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
91. ITM2B ENSGALG00000016996 1112 0.93 - - 0.930 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
92. FAM190B FAM190B 165 0.929 - - - - - - - - - 0.929
93. DBN1 ENSGALG00000033405 216 0.929 - - 0.929 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
94. AKAP10 ENSGALG00000004679 103 0.929 - - 0.929 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]
95. FAM129A ENSGALG00000004812 269 0.929 - - - - - - - - - 0.929 family with sequence similarity 129 member A [Source:NCBI gene;Acc:424451]
96. GRK4 ENSGALG00000015645 1065 0.929 - - - - - - - - - 0.929 G protein-coupled receptor kinase 4 [Source:NCBI gene;Acc:422879]
97. SLC39A13 ENSGALG00000008122 2003 0.929 - - - - - - - - - 0.929 solute carrier family 39 member 13 [Source:NCBI gene;Acc:423183]
98. NXPE3 ENSGALG00000015344 111 0.929 - - 0.929 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
99. C10orf118 C10orf118 762 0.929 - - - - - - - - - 0.929
100. KCTD3 ENSGALG00000009678 335 0.929 - - 0.929 - - - - - - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]

There are 821 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA