Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PRPF38A

Gene Name Gene ID Reads Annotation
PRPF38A ENSGALG00000010627 2476 pre-mRNA processing factor 38A [Source:NCBI gene;Acc:771795]











Genes with expression patterns similar to PRPF38A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PRPF38A ENSGALG00000010627 2476 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 pre-mRNA processing factor 38A [Source:NCBI gene;Acc:771795]
2. HIAT1 HIAT1 447 0.908 - - - - - - - 0.908 - -
3. APCDD1 ENSGALG00000000894 1482 0.907 - - - - - - - 0.907 - - APC down-regulated 1 [Source:NCBI gene;Acc:426765]
4. TCF15 ENSGALG00000026276 3646 0.907 - - - - - - - 0.907 - - transcription factor 15 [Source:NCBI gene;Acc:395788]
5. ENSGALG00000026592 ENSGALG00000026592 4331 0.907 - - - - - - - 0.907 - -
6. ECHDC1 ENSGALG00000014828 958 0.906 - - - - - - - 0.906 - - ethylmalonyl-CoA decarboxylase 1 [Source:NCBI gene;Acc:769021]
7. MTFR1L ENSGALG00000000998 3457 0.905 - - - - - - - 0.905 - - mitochondrial fission regulator 1 like [Source:HGNC Symbol;Acc:HGNC:28836]
8. CHST10 ENSGALG00000016769 2472 0.905 - - - - - - - 0.905 - - carbohydrate sulfotransferase 10 [Source:NCBI gene;Acc:395206]
9. ORAI2 ENSGALG00000001837 2528 0.904 - - - - - - - 0.904 - - ORAI calcium release-activated calcium modulator 2 [Source:NCBI gene;Acc:417509]
10. SNRNP25 ENSGALG00000026559 2097 0.904 - - - - - - - 0.904 - - small nuclear ribonucleoprotein U11/U12 subunit 25 [Source:HGNC Symbol;Acc:HGNC:14161]
11. SLC25A33 ENSGALG00000002519 4173 0.903 - - - - - - - 0.903 - - solute carrier family 25 member 33 [Source:HGNC Symbol;Acc:HGNC:29681]
12. CSRNP1 ENSGALG00000027905 3141 0.902 - - - - - - - 0.902 - - cysteine and serine rich nuclear protein 1 [Source:HGNC Symbol;Acc:HGNC:14300]
13. CHMP7 ENSGALG00000000409 8967 0.901 - - - - - - - 0.901 - - charged multivesicular body protein 7 [Source:NCBI gene;Acc:419535]
14. CMIP ENSGALG00000038494 5016 0.9 - - - - - - - 0.900 - - c-Maf inducing protein [Source:HGNC Symbol;Acc:HGNC:24319]
15. GSTK1 ENSGALG00000014708 4687 0.899 - - - - - - - 0.899 - - glutathione S-transferase kappa 1 [Source:NCBI gene;Acc:418302]
16. SEC23A_1 ENSGALG00000010150 14745 0.898 - - - - - - - 0.898 - - Sec23 homolog A, coat complex II component [Source:HGNC Symbol;Acc:HGNC:10701]
17. WDR70 ENSGALG00000003708 5835 0.896 - - - - - - - 0.896 - - WD repeat domain 70 [Source:NCBI gene;Acc:427444]
18. USPL1 ENSGALG00000017079 6263 0.895 - - - - - - - 0.895 - - ubiquitin specific peptidase like 1 [Source:NCBI gene;Acc:395436]
19. DCN ENSGALG00000011274 4166 0.895 - - - - - - - 0.895 - - decorin [Source:NCBI gene;Acc:417892]
20. TRAPPC8 ENSGALG00000015157 4308 0.895 - - - - - - - 0.895 - - trafficking protein particle complex 8, transcript variant X5
21. DPP9 ENSGALG00000004200 4515 0.894 - - - - - - - 0.894 - - dipeptidyl peptidase 9 [Source:HGNC Symbol;Acc:HGNC:18648]
22. CCDC101 CCDC101 9111 0.891 - - - - - - - 0.891 - -
23. DR1 ENSGALG00000005858 8016 0.891 - - - - - - - 0.891 - - down-regulator of transcription 1 [Source:NCBI gene;Acc:424496]
24. TMEM128 ENSGALG00000014992 6567 0.886 - - - - - - - 0.886 - - transmembrane protein 128 [Source:NCBI gene;Acc:422845]
25. NDUFA7 ENSGALG00000000629 14046 0.881 - - - - - - - 0.881 - - NADH:ubiquinone oxidoreductase subunit A7
26. PDAP1 ENSGALG00000036552 28881 0.879 - - - - - - - 0.879 - - PDGFA associated protein 1 [Source:HGNC Symbol;Acc:HGNC:14634]
27. CASP8AP2 ENSGALG00000015611 5657 0.879 - - - - - - - 0.879 - - caspase 8 associated protein 2 [Source:HGNC Symbol;Acc:HGNC:1510]
28. RWDD1 ENSGALG00000014953 9986 0.877 - - - - - - - 0.877 - - RWD domain containing 1 [Source:NCBI gene;Acc:421741]
29. PMM2 ENSGALG00000007326 8260 0.875 - - - - - - - 0.875 - - phosphomannomutase 2 [Source:NCBI gene;Acc:427679]
30. LZIC ENSGALG00000002616 9052 0.863 - - - - - - - 0.863 - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
31. NCKAP1 ENSGALG00000002750 22749 0.86 - - - - - - - 0.860 - - NCK associated protein 1 [Source:HGNC Symbol;Acc:HGNC:7666]
32. KIF23 ENSGALG00000008095 9919 0.855 - - - - - - - 0.855 - - kinesin family member 23 [Source:NCBI gene;Acc:415567]
33. NUDCD2 ENSGALG00000001726 6303 0.844 - - - - - - - 0.844 - - NudC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30535]
34. TOMM22 ENSGALG00000019316 27323 0.844 - - - - - - - 0.844 - - translocase of outer mitochondrial membrane 22 [Source:HGNC Symbol;Acc:HGNC:18002]
35. GSTAL2 ENSGALG00000028551 4899 0.844 - - - - - - - 0.844 - - glutathione S-transferase alpha-like 2, transcript variant X4
36. NXN 20202 0.84 - - - - - - - 0.840 - - nucleoredoxin, transcript variant X1
37. TMED2 ENSGALG00000003307 20704 0.839 - - - - - - - 0.839 - - transmembrane p24 trafficking protein 2 [Source:NCBI gene;Acc:416821]
38. SCP2 ENSGALG00000010652 19563 0.834 - - - - - - - 0.834 - - sterol carrier protein 2 [Source:NCBI gene;Acc:396550]
39. IKBKAP 4508 0.831 - - - - - - - 0.831 - - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein
40. CANX ENSGALG00000032148 11297 0.828 - - - - - - - 0.828 - - calnexin [Source:NCBI gene;Acc:416288]
41. G3BP1 ENSGALG00000004160 36795 0.823 - - - - - - - 0.823 - - G3BP stress granule assembly factor 1 [Source:NCBI gene;Acc:416265]
42. GRAMD3 1685 0.814 - - 0.814 - - - - - - - GRAM domain containing 3, transcript variant X9
43. PDS5A ENSGALG00000014286 13077 0.812 - - - - - - - 0.812 - - PDS5 cohesin associated factor A [Source:NCBI gene;Acc:422787]
44. NSUN6 ENSGALG00000008564 9 0.806 - - 0.806 - - - - - - - NOP2/Sun RNA methyltransferase family member 6 [Source:HGNC Symbol;Acc:HGNC:23529]
45. TBCD ENSGALG00000001503 7880 0.805 - - - - - - - 0.805 - - tubulin folding cofactor D [Source:NCBI gene;Acc:417334]
46. MECR ENSGALG00000032763 110 0.803 - - 0.803 - - - - - - - mitochondrial trans-2-enoyl-CoA reductase [Source:HGNC Symbol;Acc:HGNC:19691]
47. DDX19B ENSGALG00000039967 49600 0.803 - - - - - - - 0.803 - - ATP-dependent RNA helicase DDX19B [Source:NCBI gene;Acc:426504]
48. CCDC88C ENSGALG00000040156 6191 0.797 - - - - - - - 0.797 - - coiled-coil domain containing 88C [Source:HGNC Symbol;Acc:HGNC:19967]
49. GABARAPL2 ENSGALG00000003208 9195 0.782 - - - - - - - 0.782 - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
50. AGPAT3 ENSGALG00000031932 6903 0.782 - - - - - - - 0.782 - - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:326]
51. PCBP2 ENSGALG00000013155, ENSGALG00000041030 15 0.78 - - 0.780 - - - - - - - poly(rC) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8648]
52. PAIP2 11856 0.779 - - - - - - - 0.779 - - poly(A) binding protein interacting protein 2, transcript variant X1
53. GSPT1 15580 0.777 - - - - - - - 0.777 - - G1 to S phase transition 1, transcript variant X1
54. SLITRK2 ENSGALG00000009192 51 0.77 - - 0.770 - - - - - - - SLIT and NTRK like family member 2 [Source:HGNC Symbol;Acc:HGNC:13449]
55. PNKD ENSGALG00000022166 595 0.768 - - - - - - - - - 0.768 PNKD, MBL domain containing [Source:HGNC Symbol;Acc:HGNC:9153]
56. NFXL1 ENSGALG00000014138 36 0.766 - - 0.766 - - - - - - - nuclear transcription factor, X-box binding like 1 [Source:HGNC Symbol;Acc:HGNC:18726]
57. PSTK 2511 0.763 - - 0.763 - - - - - - - phosphoseryl-tRNA kinase, transcript variant X1
58. IK ENSGALG00000037172 12100 0.76 - - - - - - - 0.760 - - IK cytokine, down-regulator of HLA II [Source:NCBI gene;Acc:416133]
59. ZDHHC15 ENSGALG00000007800 24 0.759 - - 0.759 - - - - - - - zinc finger DHHC-type containing 15 [Source:HGNC Symbol;Acc:HGNC:20342]
60. PRLR ENSGALG00000003446 19 0.759 - - 0.759 - - - - - - - prolactin receptor [Source:NCBI gene;Acc:395660]
61. RFESD ENSGALG00000014673 198 0.759 - - - - - - - - - 0.759 Rieske Fe-S domain containing [Source:HGNC Symbol;Acc:HGNC:29587]
62. GPCPD1 ENSGALG00000009130 24 0.757 - - 0.757 - - - - - - - Gallus gallus glycerophosphocholine phosphodiesterase 1 (GPCPD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318987]
63. MTMR3 ENSGALG00000008051 9 0.754 - - 0.754 - - - - - - - myotubularin related protein 3 [Source:NCBI gene;Acc:417015]
64. PFN2 313 0.753 - - 0.753 - - - - - - - profilin 2, transcript variant X2
65. STARD9 65 0.752 - - 0.752 - - - - - - - StAR related lipid transfer domain containing 9, transcript variant X1
66. EPHA10 ENSGALG00000001912 5 0.75 - - 0.750 - - - - - - - EPH receptor A10, transcript variant X1
67. SLC6A18 ENSGALG00000013180 6 0.75 - - 0.750 - - - - - - - solute carrier family 6 member 18 [Source:HGNC Symbol;Acc:HGNC:26441]
68. ENSGALG00000020389 ENSGALG00000020389 5 0.75 - - 0.750 - - - - - - -
69. OGDHL ENSGALG00000002266 57 0.748 - - 0.748 - - - - - - - oxoglutarate dehydrogenase like [Source:NCBI gene;Acc:423618]
70. DRD4 ENSGALG00000040761 79 0.747 - - 0.747 - - - - - - - dopamine receptor D4 [Source:NCBI gene;Acc:423016]
71. PSMA6 ENSGALG00000010060 26517 0.747 - - - - - - - 0.747 - - proteasome subunit alpha 6 [Source:NCBI gene;Acc:423326]
72. PARG ENSGALG00000002117 8702 0.745 - - - - - - - 0.745 - - poly(ADP-ribose) glycohydrolase [Source:HGNC Symbol;Acc:HGNC:8605]
73. ENSGALG00000017269 ENSGALG00000017269 13 0.745 - - 0.745 - - - - - - -
74. TSPAN12 ENSGALG00000009029 2145 0.743 - - 0.743 - - - - - - - tetraspanin 12 [Source:NCBI gene;Acc:417763]
75. PDE1C ENSGALG00000039935 16 0.742 - - 0.742 - - - - - - - phosphodiesterase 1C [Source:HGNC Symbol;Acc:HGNC:8776]
76. KLHL23 ENSGALG00000020737 13 0.742 - - 0.742 - - - - - - - kelch like family member 23 [Source:HGNC Symbol;Acc:HGNC:27506]
77. ENSGALG00000027352 ENSGALG00000027352 69 0.739 - - 0.739 - - - - - - -
78. AGBL2 ENSGALG00000029618 8 0.738 - - 0.738 - - - - - - - ATP/GTP binding protein like 2 [Source:HGNC Symbol;Acc:HGNC:26296]
79. BLVRA ENSGALG00000031786 23 0.738 - - 0.738 - - - - - - - biliverdin reductase A [Source:HGNC Symbol;Acc:HGNC:1062]
80. TNIP1 ENSGALG00000004496 355 0.738 - - 0.738 - - - - - - - TNFAIP3 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:16903]
81. TNFRSF1B ENSGALG00000034213 780 0.735 - - 0.735 - - - - - - - TNF receptor superfamily member 1B [Source:NCBI gene;Acc:395083]
82. ADAMTS15 ENSGALG00000001407 11 0.735 - - 0.735 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 15 [Source:HGNC Symbol;Acc:HGNC:16305]
83. ACSS1 ENSGALG00000008632 397 0.734 - - 0.734 - - - - - - - acyl-CoA synthetase short chain family member 1 [Source:HGNC Symbol;Acc:HGNC:16091]
84. AKAP6 ENSGALG00000009995 77 0.733 - - 0.733 - - - - - - - A-kinase anchoring protein 6 [Source:HGNC Symbol;Acc:HGNC:376]
85. ERCC5 ENSGALG00000016860 1326 0.732 - - 0.732 - - - - - - - ERCC excision repair 5, endonuclease [Source:NCBI gene;Acc:428019]
86. UXS1 ENSGALG00000016801 3724 0.73 - - - - - - - 0.730 - - UDP-glucuronate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:17729]
87. LRRN4 ENSGALG00000008815 481 0.73 - - 0.730 - - - - - - - leucine rich repeat neuronal 4 [Source:HGNC Symbol;Acc:HGNC:16208]
88. KCNC4 ENSGALG00000000400 129 0.729 - - 0.729 - - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 4, transcript variant X1
89. ZDHHC20 ENSGALG00000017126 58 0.728 - - 0.728 - - - - - - - zinc finger DHHC-type containing 20 [Source:HGNC Symbol;Acc:HGNC:20749]
90. RNASET2 ENSGALG00000011426 40 0.728 - - 0.728 - - - - - - - ribonuclease T2 [Source:NCBI gene;Acc:421569]
91. SVOPL ENSGALG00000012812 27 0.728 - - 0.728 - - - - - - - SVOP like [Source:HGNC Symbol;Acc:HGNC:27034]
92. ASTL ENSGALG00000037220 2775 0.727 - - 0.727 - - - - - - - astacin like metalloendopeptidase [Source:NCBI gene;Acc:423176]
93. NCL ENSGALG00000032930 66655 0.727 - - - - - - - 0.727 - - nucleolin [Source:NCBI gene;Acc:396201]
94. ENSGALG00000026309 ENSGALG00000026309 360 0.725 - - - - - - - - - 0.725
95. RAF1 ENSGALG00000004998 327 0.724 - - 0.724 - - - - - - - Raf-1 proto-oncogene, serine/threonine kinase [Source:NCBI gene;Acc:396245]
96. TRPA1 ENSGALG00000034751 148 0.723 - - 0.723 - - - - - - - Gallus gallus transient receptor potential cation channel subfamily A member 1 (TRPA1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318460]
97. JPH3 ENSGALG00000029424 65 0.723 - - 0.723 - - - - - - - junctophilin 3 [Source:HGNC Symbol;Acc:HGNC:14203]
98. RGMB ENSGALG00000015284 14 0.723 - - 0.723 - - - - - - - repulsive guidance molecule BMP co-receptor b [Source:HGNC Symbol;Acc:HGNC:26896]
99. ENSGALG00000028038 ENSGALG00000028038 9 0.722 - - 0.722 - - - - - - -
100. PNPLA2 ENSGALG00000014569 7 0.722 - - 0.722 - - - - - - - patatin like phospholipase domain containing 2 [Source:NCBI gene;Acc:431066]

There are 31 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA