Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PRKDC

Gene Name Gene ID Reads Annotation
PRKDC ENSGALG00000042469 449 protein kinase, DNA-activated, catalytic polypeptide [Source:NCBI gene;Acc:395376]











Genes with expression patterns similar to PRKDC

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PRKDC ENSGALG00000042469 449 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein kinase, DNA-activated, catalytic polypeptide [Source:NCBI gene;Acc:395376]
2. SMOC2 ENSGALG00000011205 340 1.723 - - - - 0.778 0.945 - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
3. TCTE3 ENSGALG00000011189 106 1.625 - - - - 0.785 0.840 - - - - t-complex-associated-testis-expressed 3 [Source:HGNC Symbol;Acc:HGNC:11695]
4. ASCC3 ENSGALG00000015465 259 1.606 - - - - - 0.863 - - 0.743 - activating signal cointegrator 1 complex subunit 3 [Source:NCBI gene;Acc:421790]
5. AFG3L2_1 ENSGALG00000013853 1319 1.589 - - - - - 0.790 - - - 0.799 AFG3 like matrix AAA peptidase subunit 2 [Source:HGNC Symbol;Acc:HGNC:315]
6. RNF152 ENSGALG00000028822 291 1.568 - - - - 0.834 - - - 0.734 - ring finger protein 152 [Source:NCBI gene;Acc:420909]
7. CDC40 ENSGALG00000015061 6118 1.456 - - - - - 0.738 - - 0.718 - cell division cycle 40 [Source:NCBI gene;Acc:421760]
8. OLFML1 ENSGALG00000027184 19 0.949 - - - - - 0.949 - - - - olfactomedin like 1 [Source:HGNC Symbol;Acc:HGNC:24473]
9. SH2D1B ENSGALG00000028448 17 0.949 - - - - - 0.949 - - - - SH2 domain containing 1B [Source:NCBI gene;Acc:418411]
10. KIF7 ENSGALG00000006611 33 0.949 - - - - - 0.949 - - - - kinesin family member 7 [Source:HGNC Symbol;Acc:HGNC:30497]
11. NIPAL4 ENSGALG00000039687 29 0.947 - - - - - 0.947 - - - - NIPA like domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28018]
12. GPD1L2 ENSGALG00000012061 31 0.947 - - - - - 0.947 - - - - glycerol-3-phosphate dehydrogenase 1-like 2
13. RAC3 ENSGALG00000040606 355 0.945 - - - - - 0.945 - - - - Rac family small GTPase 3 [Source:NCBI gene;Acc:395870]
14. HJURP ENSGALG00000015363 54 0.945 - - - - - 0.945 - - - - Holliday junction recognition protein [Source:NCBI gene;Acc:418413]
15. MCC ENSGALG00000000208 61 0.944 - - - - - 0.944 - - - - MCC, WNT signaling pathway regulator [Source:HGNC Symbol;Acc:HGNC:6935]
16. ADNP2 ENSGALG00000035669 318 0.944 - - - - - 0.944 - - - - ADNP homeobox 2 [Source:HGNC Symbol;Acc:HGNC:23803]
17. BLVRA ENSGALG00000031786 23 0.943 - - - - - 0.943 - - - - biliverdin reductase A [Source:HGNC Symbol;Acc:HGNC:1062]
18. SERPINB1 ENSGALG00000019555 29 0.942 - - - - - 0.942 - - - - serpin family B member 1 [Source:HGNC Symbol;Acc:HGNC:3311]
19. ENSGALG00000002946 ENSGALG00000002946 56 0.942 - - - - - 0.942 - - - -
20. LOC419851 ENSGALG00000023953 80 0.939 - - - - - 0.939 - - - - complement component 4 binding protein, alpha chain
21. SERPINF2 ENSGALG00000002987 236 0.938 - - - - - 0.938 - - - - serpin family F member 2 [Source:HGNC Symbol;Acc:HGNC:9075]
22. DRD4 ENSGALG00000040761 79 0.937 - - - - - 0.937 - - - - dopamine receptor D4 [Source:NCBI gene;Acc:423016]
23. AQP1 ENSGALG00000005209 111 0.937 - - - - - 0.937 - - - - aquaporin 1 [Source:NCBI gene;Acc:420384]
24. POLB ENSGALG00000040828 7462 0.936 - - - - - 0.936 - - - - DNA polymerase beta [Source:HGNC Symbol;Acc:HGNC:9174]
25. C1orf168 C1orf168 98 0.935 - - - - - 0.935 - - - -
26. PACSIN2 ENSGALG00000014159 601 0.935 - - - - - 0.935 - - - - protein kinase C and casein kinase substrate in neurons 2 [Source:NCBI gene;Acc:395975]
27. CLASP1 ENSGALG00000011645 1378 0.935 - - - - - 0.935 - - - - cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]
28. GTF3C4 ENSGALG00000031016 1221 0.928 - - - - - 0.928 - - - - general transcription factor IIIC subunit 4 [Source:HGNC Symbol;Acc:HGNC:4667]
29. SCAF8 ENSGALG00000013635 421 0.928 - - - - - 0.928 - - - - SR-related CTD associated factor 8 [Source:HGNC Symbol;Acc:HGNC:20959]
30. ACN9 ACN9 269 0.926 - - - - - 0.926 - - - -
31. TTC7A ENSGALG00000010020 793 0.924 - - - - - 0.924 - - - - tetratricopeptide repeat domain 7A [Source:NCBI gene;Acc:421414]
32. DSEL ENSGALG00000042505 92 0.922 - - - - - 0.922 - - - - dermatan sulfate epimerase like [Source:HGNC Symbol;Acc:HGNC:18144]
33. WHAMM ENSGALG00000006002 1678 0.922 - - - - - 0.922 - - - - WAS protein homolog associated with actin, golgi membranes and microtubules [Source:HGNC Symbol;Acc:HGNC:30493]
34. LTC4SL ENSGALG00000011450 645 0.92 - - - - - 0.920 - - - - leukotriene C4 synthase-like, transcript variant X3
35. ELMSAN1 ENSGALG00000009282 79 0.918 - - - - - 0.918 - - - - ELM2 and Myb/SANT domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19853]
36. LOC415478 ENSGALG00000021171 100 0.918 - - - - - 0.918 - - - - transmembrane protein 2-like, transcript variant X2
37. DBT ENSGALG00000005280 2893 0.918 - - - - - 0.918 - - - - dihydrolipoamide branched chain transacylase E2 [Source:NCBI gene;Acc:395374]
38. FAM177A1 ENSGALG00000010046 4318 0.917 - - - - - 0.917 - - - - family with sequence similarity 177 member A1 [Source:NCBI gene;Acc:423323]
39. GOLGA1 ENSGALG00000001025 334 0.917 - - - - - 0.917 - - - - golgin A1 [Source:HGNC Symbol;Acc:HGNC:4424]
40. HRH3 ENSGALG00000005170 5 0.916 - - - - 0.916 - - - - - histamine receptor H3 [Source:HGNC Symbol;Acc:HGNC:5184]
41. SNORA23 SNORA23 5 0.916 - - - - 0.916 - - - - -
42. DSL1 DSL1 113 0.915 - - - - - 0.915 - - - -
43. CARKD CARKD 2914 0.914 - - - - - 0.914 - - - -
44. COBL ENSGALG00000013102 84 0.913 - - - - - 0.913 - - - - cordon-bleu WH2 repeat protein [Source:HGNC Symbol;Acc:HGNC:22199]
45. GYPC ENSGALG00000011566 99 0.912 - - - - - 0.912 - - - - glycophorin C (Gerbich blood group) [Source:NCBI gene;Acc:424230]
46. EVC2 ENSGALG00000015029 51 0.91 - - - - - 0.910 - - - - EvC ciliary complex subunit 2 [Source:NCBI gene;Acc:770095]
47. KLHL40 ENSGALG00000005292 61 0.91 - - - - - 0.910 - - - - kelch like family member 40 [Source:HGNC Symbol;Acc:HGNC:30372]
48. DIAPH3 ENSGALG00000016937 1069 0.909 - - - - - 0.909 - - - - diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
49. ATG10 ENSGALG00000027714 1100 0.907 - - - - - 0.907 - - - - autophagy related 10 [Source:HGNC Symbol;Acc:HGNC:20315]
50. TPCN3 ENSGALG00000008198 124 0.905 - - - - - 0.905 - - - - two-pore calcium channel 3 [Source:NCBI gene;Acc:421224]
51. FGD4 ENSGALG00000012932 50 0.904 - - - - - 0.904 - - - - FYVE, RhoGEF and PH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:19125]
52. SMCHD1 ENSGALG00000014811 730 0.904 - - - - - 0.904 - - - - structural maintenance of chromosomes flexible hinge domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29090]
53. ENSGALG00000014545 ENSGALG00000014545 285 0.903 - - - - - 0.903 - - - -
54. ENSGALG00000026461 ENSGALG00000026461 61 0.901 - - - - - 0.901 - - - -
55. NOTUM ENSGALG00000002900 55 0.898 - - - - 0.898 - - - - - notum, palmitoleoyl-protein carboxylesterase [Source:HGNC Symbol;Acc:HGNC:27106]
56. PON2 ENSGALG00000009689 1416 0.897 - - - - - 0.897 - - - - paraoxonase 2 [Source:NCBI gene;Acc:395830]
57. JAKMIP2 ENSGALG00000007593 95 0.896 - - - - - 0.896 - - - - janus kinase and microtubule interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:29067]
58. CRCP ENSGALG00000002587 8809 0.896 - - - - - 0.896 - - - - CGRP receptor component [Source:NCBI gene;Acc:396022]
59. GDE1 ENSGALG00000006916 1040 0.893 - - - - - 0.893 - - - - glycerophosphodiester phosphodiesterase 1 [Source:HGNC Symbol;Acc:HGNC:29644]
60. SLC9A9 ENSGALG00000002374 179 0.892 - - - - - 0.892 - - - - solute carrier family 9 member A9 [Source:NCBI gene;Acc:424772]
61. MXRA5 ENSGALG00000016635 352 0.891 - - - - - 0.891 - - - - matrix remodeling associated 5 [Source:HGNC Symbol;Acc:HGNC:7539]
62. TERF1 ENSGALG00000037453 4497 0.891 - - - - - 0.891 - - - - telomeric repeat binding factor 1 [Source:NCBI gene;Acc:378896]
63. FAM149B1 ENSGALG00000002693 16 0.887 - - - - 0.887 - - - - - family with sequence similarity 149 member B1 [Source:HGNC Symbol;Acc:HGNC:29162]
64. LEMD3 ENSGALG00000009873 347 0.886 - - - - - 0.886 - - - - LEM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28887]
65. CADPS2 ENSGALG00000008926 398 0.886 - - - - - 0.886 - - - - calcium dependent secretion activator 2 [Source:HGNC Symbol;Acc:HGNC:16018]
66. ABCC3 ENSGALG00000007522 340 0.885 - - - - - 0.885 - - - - ATP binding cassette subfamily C member 3, transcript variant X5
67. ENSGALG00000004127 ENSGALG00000004127 566 0.885 - - - - - 0.885 - - - -
68. FAM175B 3194 0.883 - - - - - 0.883 - - - - family with sequence similarity 175 member B, transcript variant X2
69. FKBP1B ENSGALG00000016500 117 0.883 - - - - - 0.883 - - - - FK506 binding protein 1B [Source:NCBI gene;Acc:395254]
70. SPSB3 ENSGALG00000002285 1329 0.883 - - - - - 0.883 - - - - splA/ryanodine receptor domain and SOCS box containing 3 [Source:HGNC Symbol;Acc:HGNC:30629]
71. TOM1L2 ENSGALG00000004902 89 0.883 - - - - 0.883 - - - - - target of myb1 like 2 membrane trafficking protein [Source:NCBI gene;Acc:416509]
72. CELF1 ENSGALG00000008097 4717 0.88 - - - - - 0.880 - - - - CUGBP Elav-like family member 1 [Source:NCBI gene;Acc:373923]
73. C9orf96 C9orf96 43 0.875 - - - - - 0.875 - - - -
74. GMEB1 ENSGALG00000038488 158 0.874 - - - - - 0.874 - - - - glucocorticoid modulatory element binding protein 1 [Source:HGNC Symbol;Acc:HGNC:4370]
75. DDI2 115 0.873 - - - - - 0.873 - - - - DNA damage inducible 1 homolog 2, transcript variant X2
76. PNPLA4 ENSGALG00000016618 142 0.872 - - - - - 0.872 - - - - patatin like phospholipase domain containing 4 [Source:NCBI gene;Acc:418653]
77. NIPAL3 ENSGALG00000004268 37 0.87 - - - - 0.870 - - - - - NIPA like domain containing 3 [Source:HGNC Symbol;Acc:HGNC:25233]
78. ENSGALG00000001478 ENSGALG00000001478 23 0.869 - - - - 0.869 - - - - -
79. TEAD4 ENSGALG00000014342 6123 0.867 - - - - - 0.867 - - - - Gallus gallus TEA domain transcription factor 4 (TEAD4), transcript variant 7, mRNA. [Source:RefSeq mRNA;Acc:NM_001359859]
80. APLF ENSGALG00000008745 887 0.866 - - - - - 0.866 - - - - aprataxin and PNKP like factor [Source:NCBI gene;Acc:421264]
81. UBAP1L ENSGALG00000007333 39 0.866 - - - - 0.866 - - - - - ubiquitin associated protein 1 like [Source:NCBI gene;Acc:769261]
82. CDC14A ENSGALG00000005248 502 0.866 - - - - - 0.866 - - - - cell division cycle 14A [Source:NCBI gene;Acc:424466]
83. WARS ENSGALG00000011228 193 0.865 - - - - - 0.865 - - - - tryptophanyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:12729]
84. ZNF236 ENSGALG00000013657 154 0.864 - - - - - 0.864 - - - - zinc finger protein 236 [Source:HGNC Symbol;Acc:HGNC:13028]
85. E4F1 ENSGALG00000005900 1814 0.863 - - - - - 0.863 - - - - E4F transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:3121]
86. CBX8 ENSGALG00000026548 1063 0.859 - - - - - 0.859 - - - - chromobox 8 [Source:HGNC Symbol;Acc:HGNC:15962]
87. ASAP2 ENSGALG00000016419 1393 0.859 - - - - - 0.859 - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
88. DENND5A ENSGALG00000005840 54 0.859 - - - - 0.859 - - - - - DENN domain containing 5A [Source:HGNC Symbol;Acc:HGNC:19344]
89. PRUNE PRUNE 452 0.858 - - - - - 0.858 - - - -
90. VRK2 ENSGALG00000032770 117 0.857 - - - - - 0.857 - - - - vaccinia related kinase 2 [Source:HGNC Symbol;Acc:HGNC:12719]
91. PAFAH2 ENSGALG00000021658 68 0.856 - - - - 0.856 - - - - - platelet activating factor acetylhydrolase 2 [Source:HGNC Symbol;Acc:HGNC:8579]
92. GCHFR ENSGALG00000032239 1608 0.855 - - - - - 0.855 - - - - GTP cyclohydrolase I feedback regulator [Source:NCBI gene;Acc:423003]
93. EIF2AK4 ENSGALG00000009611 2164 0.855 - - - - - 0.855 - - - - eukaryotic translation initiation factor 2 alpha kinase 4 [Source:HGNC Symbol;Acc:HGNC:19687]
94. VPRBP VPRBP 4037 0.854 - - - - - 0.854 - - - -
95. ORMDL3 ENSGALG00000029142 165 0.853 - - - - - 0.853 - - - - ORMDL sphingolipid biosynthesis regulator 3 [Source:HGNC Symbol;Acc:HGNC:16038]
96. PRKAR1A ENSGALG00000004237 4785 0.852 - - - - - 0.852 - - - - protein kinase cAMP-dependent type I regulatory subunit alpha [Source:NCBI gene;Acc:417438]
97. gga-mir-7474 ENSGALG00000033766 5727 0.852 - - - - - 0.852 - - - - gga-mir-7474 [Source:miRBase;Acc:MI0024147]
98. YTHDF1 ENSGALG00000005745 135 0.85 - - - - - 0.850 - - - - YTH N6-methyladenosine RNA binding protein 1 [Source:NCBI gene;Acc:419238]
99. C20ORF7 C20ORF7 2383 0.85 - - - - - 0.850 - - - -
100. WDR59 ENSGALG00000002798 815 0.848 - - - - - 0.848 - - - - WD repeat domain 59 [Source:NCBI gene;Acc:415688]

There are 268 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA