Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for PRKDC

Gene Name Gene ID Reads Annotation
PRKDC ENSDARG00000075083 693 protein kinase, DNA-activated, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-030131-9008]










Genes with expression patterns similar to PRKDC

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. PRKDC ENSDARG00000075083 693 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein kinase, DNA-activated, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-030131-9008]
2. foxp1b ENSDARG00000014181 2594 1.778 - 0.827 - - - - - 0.951 - forkhead box P1b [Source:ZFIN;Acc:ZDB-GENE-041203-1]
3. b4galt7 ENSDARG00000021899 546 1.763 - - - - - 0.788 - 0.975 - xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I) [Source:ZFIN;Acc:ZDB-GENE-040727-3]
4. irf2a ENSDARG00000007387 915 1.755 - - - - - - 0.765 0.990 - interferon regulatory factor 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4135]
5. SBNO2 SBNO2 773 1.753 - 0.766 - - - - - 0.987 -
6. SB:CB827 SB:CB827 245 1.748 - - - - - 0.757 - 0.991 -
7. SIPA1L3 ENSDARG00000061699 268 1.747 - - - - - - 0.755 0.992 - signal-induced proliferation-associated 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-050420-109]
8. GANAB_1 GANAB_1 685 1.736 - 0.747 - - - - - 0.989 -
9. nae1 ENSDARG00000011301, ENSDARG00000111542 1505 1.721 - - - - - 0.742 - 0.979 - nedd8 activating enzyme E1 subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1552]
10. hnrnpa0l_1 ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 553 1.708 - 0.717 - - - - - 0.991 - heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
11. bsk146 ENSDARG00000099069 274 1.707 - - - - - 0.715 - 0.992 - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
12. pcdh10b ENSDARG00000102824 732 1.699 - 0.713 - - - - - 0.986 - protocadherin 10b [Source:ZFIN;Acc:ZDB-GENE-030721-4]
13. sgsm3 ENSDARG00000019038 352 1.697 - 0.707 - - - - - 0.990 - small G protein signaling modulator 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2635]
14. rapgef1a ENSDARG00000043593 416 1.697 - 0.705 - - - - - 0.992 - Rap guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-081105-26]
15. dennd5a ENSDARG00000017006 3426 1.696 - - - - - - 0.717 0.979 - DENN/MADD domain containing 5A [Source:ZFIN;Acc:ZDB-GENE-071211-1]
16. TSSC4 ENSDARG00000036144 1994 1.692 - - - - - - 0.746 0.946 - tumor suppressing subtransferable candidate 4 [Source:ZFIN;Acc:ZDB-GENE-060825-263]
17. cox14 ENSDARG00000092124 2229 1.686 - 0.742 - - - - - 0.944 - cytochrome c oxidase assembly factor COX14 [Source:ZFIN;Acc:ZDB-GENE-060503-626]
18. agpat4 ENSDARG00000069044 4487 1.671 - 0.714 - - - - - 0.957 - 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) [Source:ZFIN;Acc:ZDB-GENE-040426-1924]
19. alox5 alox5 406 1.665 - 0.862 - - - - 0.803 - -
20. si:ch211-194k22.8 ENSDARG00000096711 1318 1.662 - - - - - - 0.701 0.961 - si:ch211-194k22.8 [Source:ZFIN;Acc:ZDB-GENE-030131-1820]
21. pan2 ENSDARG00000074675 641 1.651 - 0.886 - - - 0.765 - - - poly(A) specific ribonuclease subunit PAN2 [Source:ZFIN;Acc:ZDB-GENE-030131-3113]
22. CU862021.1 CU862021.1 5925 1.617 - - - - - - 0.719 0.898 -
23. ap1s3b ENSDARG00000027966 1064 1.601 - 0.872 - - - - 0.729 - - adaptor related protein complex 1 subunit sigma 3b [Source:ZFIN;Acc:ZDB-GENE-040912-62]
24. cdkl1 ENSDARG00000017329 3345 1.6 - - - 0.701 - - - 0.899 - cyclin-dependent kinase-like 1 (CDC2-related kinase) [Source:ZFIN;Acc:ZDB-GENE-040808-34]
25. rbm8a ENSDARG00000016516 8789 1.594 - - - - - - 0.708 0.886 - RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
26. zgc:63637 zgc:63637 3636 1.582 - - - 0.763 - - - 0.819 -
27. crabp1b ENSDARG00000035904 2753 1.569 - - - 0.768 - - 0.801 - - cellular retinoic acid binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040624-3]
28. tnfaip8l3 ENSDARG00000088709 345 1.566 - 0.760 - 0.806 - - - - - tumor necrosis factor, alpha-induced protein 8-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1313]
29. arl4cb ENSDARG00000032708, ENSDARG00000110274 2769 1.552 - 0.787 - 0.765 - - - - - ADP-ribosylation factor-like 4Cb [Source:ZFIN;Acc:ZDB-GENE-040426-2382]
30. apbb1ip ENSDARG00000016505 224 1.53 - 0.772 - - - - 0.758 - - amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-1318]
31. plk2b ENSDARG00000019130, ENSDARG00000111402 328 1.529 - - - 0.754 - 0.775 - - - polo-like kinase 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070720-17]
32. dnmbp ENSDARG00000074121 2711 1.527 - 0.749 - - - - 0.778 - - dynamin binding protein [Source:ZFIN;Acc:ZDB-GENE-101026-2]
33. acin1b ENSDARG00000026842 3806 1.526 - - - - - - 0.713 0.813 - apoptotic chromatin condensation inducer 1b [Source:ZFIN;Acc:ZDB-GENE-030826-12]
34. diablob ENSDARG00000014956 745 1.517 - 0.713 - 0.804 - - - - - diablo, IAP-binding mitochondrial protein b [Source:ZFIN;Acc:ZDB-GENE-070112-202]
35. itpk1 itpk1 425 1.51 - 0.769 - - - - 0.741 - -
36. tubgcp2 ENSDARG00000013079 1520 1.505 - 0.781 - - - 0.724 - - - tubulin, gamma complex associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-150]
37. cnot6 cnot6 7029 1.478 - - - - - - 0.733 0.745 -
38. rtkn2 rtkn2 1092 1.475 - 0.752 - 0.723 - - - - -
39. espl1 ENSDARG00000075354 818 1.474 - - - 0.760 - 0.714 - - - extra spindle pole bodies like 1, separase [Source:ZFIN;Acc:ZDB-GENE-030131-5188]
40. TTF2 ENSDARG00000104105 564 1.473 - - - 0.758 - - - - 0.715 transcription termination factor, RNA polymerase II [Source:ZFIN;Acc:ZDB-GENE-110411-73]
41. kctd2 ENSDARG00000025875, ENSDARG00000114216 802 1.471 - - - 0.768 - - 0.703 - - potassium channel tetramerization domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060825-85]
42. LSM5 ENSDARG00000071573 371 1.469 - - - 0.759 - 0.710 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-070822-23]
43. gpc1b ENSDARG00000090585 1393 1.467 - - - - - 0.754 0.713 - - glypican 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1306]
44. twf1b ENSDARG00000011661 630 1.467 - 0.759 - - - - 0.708 - - twinfilin actin-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040711-3]
45. arhgap5 ENSDARG00000061294 2228 1.464 - 0.713 - - - - 0.751 - - Rho GTPase activating protein 5 [Source:ZFIN;Acc:ZDB-GENE-081014-1]
46. tfr1b_1 ENSDARG00000077372, ENSDARG00000112880 343 1.458 - 0.719 - - - 0.739 - - - transferrin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-041220-2]
47. apbb2b ENSDARG00000099995 1397 1.44 - 0.704 - - - - 0.736 - - amyloid beta (A4) precursor protein-binding, family B, member 2b [Source:ZFIN;Acc:ZDB-GENE-090313-73]
48. JHDM1D JHDM1D 2277 1.44 - 0.737 - - - 0.703 - - -
49. TMEM246 ENSDARG00000061553 168 1.433 - 0.700 - - - 0.733 - - - transmembrane protein 246 [Source:ZFIN;Acc:ZDB-GENE-061013-692]
50. ryroxd1 227 1.413 - 0.702 - - - - 0.711 - - pyridine nucleotide-disulphide oxidoreductase domain 1, transcript variant X1
51. rnf216 ENSDARG00000087893 518 0.996 - - - - - - - 0.996 - ring finger protein 216 [Source:ZFIN;Acc:ZDB-GENE-081104-199]
52. xkr6 xkr6 286 0.993 - - - - - - - 0.993 -
53. ift20 ENSDARG00000040556 285 0.993 - - - - - - - 0.993 - intraflagellar transport 20 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-2]
54. DEDD ENSDARG00000029783 530 0.993 - - - - - - - 0.993 - death effector domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-386]
55. ppp1r8 ppp1r8 310 0.993 - - - - - - - 0.993 -
56. TTC28 ENSDARG00000114920 580 0.993 - - - - - - - 0.993 - tetratricopeptide repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29179]
57. BX322612.1 BX322612.1 236 0.993 - - - - - - - 0.993 -
58. eef1a1a ENSDARG00000039502 234 0.993 - - - - - - - 0.993 - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
59. XKR7 ENSDARG00000026333 175 0.993 - - - - - - - 0.993 - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
60. grna ENSDARG00000004954 189 0.993 - - - - - - - 0.993 - granulin a [Source:ZFIN;Acc:ZDB-GENE-030131-8434]
61. nkain4 ENSDARG00000062699 377 0.993 - - - - - - - 0.993 - sodium/potassium transporting ATPase interacting 4 [Source:ZFIN;Acc:ZDB-GENE-080204-60]
62. chd5 ENSDARG00000105083 132 0.993 - - - - - - - 0.993 - chromodomain helicase DNA binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-120314-2]
63. KIRREL3 ENSDARG00000115903 206 0.993 - - - - - - - 0.993 - kirre like nephrin family adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:23204]
64. tdp2b ENSDARG00000035954, ENSDARG00000109349 478 0.993 - - - - - - - 0.993 - tyrosyl-DNA phosphodiesterase 2b [Source:ZFIN;Acc:ZDB-GENE-050816-1]
65. NEDD9 ENSDARG00000089878, ENSDARG00000116312 165 0.993 - - - - - - - 0.993 - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]
66. ZNF784_2 ZNF784_2 181 0.993 - - - - - - - 0.993 -
67. anapc5 ENSDARG00000008461 434 0.992 - - - - - - - 0.992 - anaphase promoting complex subunit 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1574]
68. zgc:171727 ENSDARG00000105781 350 0.992 - - - - - - - 0.992 - zgc:171727 [Source:ZFIN;Acc:ZDB-GENE-071004-26]
69. psmd5 ENSDARG00000059046 622 0.992 - - - - - - - 0.992 - proteasome 26S subunit, non-ATPase 5 [Source:ZFIN;Acc:ZDB-GENE-050417-28]
70. wdr92 ENSDARG00000037334 329 0.992 - - - - - - - 0.992 - WD repeat domain 92 [Source:ZFIN;Acc:ZDB-GENE-050417-93]
71. dmtf1 ENSDARG00000025824, ENSDARG00000109819, ENSDARG00000110011 364 0.992 - - - - - - - 0.992 - cyclin D binding myb-like transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-413]
72. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 0.992 - - - - - - - 0.992 - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
73. lrrc4.2 ENSDARG00000003020 235 0.992 - - - - - - - 0.992 - leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]
74. map7d2b ENSDARG00000045316 702 0.992 - - - - - - - 0.992 - MAP7 domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091118-82]
75. THEM4 ENSDARG00000061621 364 0.992 - - - - - - - 0.992 - thioesterase superfamily member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-982]
76. sh3bp5a ENSDARG00000100529 642 0.991 - - - - - - - 0.991 - SH3-domain binding protein 5a (BTK-associated) [Source:ZFIN;Acc:ZDB-GENE-111111-2]
77. mapre3b ENSDARG00000102878 362 0.991 - - - - - - - 0.991 - microtubule-associated protein, RP/EB family, member 3b [Source:ZFIN;Acc:ZDB-GENE-040704-6]
78. ghitm 1443 0.991 - - - - - - - 0.991 - growth hormone inducible transmembrane protein
79. dok7 ENSDARG00000060236 364 0.991 - - - - - - - 0.991 - docking protein 7 [Source:ZFIN;Acc:ZDB-GENE-090312-103]
80. CABZ01073424.1 ENSDARG00000107858 688 0.991 - - - - - - - 0.991 -
81. pold3 ENSDARG00000076169 694 0.991 - - - - - - - 0.991 - polymerase (DNA-directed), delta 3, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-060512-59]
82. cetn2 ENSDARG00000101510 541 0.991 - - - - - - - 0.991 - centrin, EF-hand protein, 2 [Source:ZFIN;Acc:ZDB-GENE-091118-94]
83. CR354611.2 CR354611.2 2040 0.991 - - - - - - - 0.991 -
84. plk4 ENSDARG00000004576 688 0.99 - - - - - - - 0.990 - polo-like kinase 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030619-14]
85. epb41a ENSDARG00000099283 860 0.99 - - - - - - - 0.990 - erythrocyte membrane protein band 4.1a [Source:ZFIN;Acc:ZDB-GENE-070705-81]
86. PRRT2 ENSDARG00000103588 913 0.99 - - - - - - - 0.990 - proline-rich transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-121210-3]
87. TDG TDG 1191 0.989 - - - - - - - 0.989 -
88. E2F1 ENSDARG00000103868 638 0.989 - - - - - - - 0.989 - E2F transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-131024-3]
89. MANEAL ENSDARG00000056450 262 0.989 - - - - - - - 0.989 - mannosidase endo-alpha like [Source:HGNC Symbol;Acc:HGNC:26452]
90. wdr47a ENSDARG00000078136 522 0.989 - - - - - - - 0.989 - WD repeat domain 47a [Source:ZFIN;Acc:ZDB-GENE-070216-3]
91. msmo1 ENSDARG00000055876, ENSDARG00000110767, ENSDARG00000115922 195 0.989 - - - - - - - 0.989 - methylsterol monooxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2670]
92. LTN1 ENSDARG00000003984 1076 0.989 - - - - - - - 0.989 - listerin E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:13082]
93. LPL_1 LPL_1 1150 0.989 - - - - - - - 0.989 -
94. suco ENSDARG00000016532 1609 0.989 - - - - - - - 0.989 - SUN domain containing ossification factor [Source:ZFIN;Acc:ZDB-GENE-030131-2941]
95. ankrd10b ENSDARG00000004771 654 0.989 - - - - - - - 0.989 - ankyrin repeat domain 10b [Source:ZFIN;Acc:ZDB-GENE-061013-49]
96. si:ch211-195b13.1 ENSDARG00000016623 427 0.989 - - - - - - - 0.989 - si:ch211-195b13.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7626]
97. tchp ENSDARG00000035605 1695 0.989 - - - - - - - 0.989 - trichoplein, keratin filament binding [Source:ZFIN;Acc:ZDB-GENE-060421-3368]
98. ezh1 ENSDARG00000037894 294 0.989 - - - - - - - 0.989 - enhancer of zeste 1 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-050114-1]
99. DVL3 1098 0.988 - - - - - - - 0.988 - dishevelled segment polarity protein 3
100. fzd3b ENSDARG00000058692 627 0.988 - - - - - - - 0.988 - frizzled class receptor 3b [Source:ZFIN;Acc:ZDB-GENE-070122-1]

There are 1269 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA