Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PRKAB1

Gene Name Gene ID Reads Annotation
PRKAB1 ENSGALG00000007373 5312 protein kinase AMP-activated non-catalytic subunit beta 1 [Source:NCBI gene;Acc:416986]











Genes with expression patterns similar to PRKAB1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PRKAB1 ENSGALG00000007373 5312 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein kinase AMP-activated non-catalytic subunit beta 1 [Source:NCBI gene;Acc:416986]
2. MED21 ENSGALG00000027435 5766 1.565 - - - - - - 0.730 0.835 - - mediator complex subunit 21 [Source:HGNC Symbol;Acc:HGNC:11473]
3. YIPF6 ENSGALG00000035973 3333 1.523 - - - - - - 0.772 0.751 - - Yip1 domain family member 6 [Source:HGNC Symbol;Acc:HGNC:28304]
4. CCNH ENSGALG00000015641 8051 1.475 - - - - - - 0.726 0.749 - - cyclin H [Source:HGNC Symbol;Acc:HGNC:1594]
5. MLX ENSGALG00000003199 5286 0.832 - - - - - - 0.832 - - - MLX, MAX dimerization protein [Source:NCBI gene;Acc:420026]
6. SDF4 ENSGALG00000001872 6382 0.825 - - - - - - - 0.825 - - stromal cell derived factor 4 [Source:NCBI gene;Acc:419423]
7. CPOX ENSGALG00000015240 5292 0.82 - - - - - - - 0.820 - - coproporphyrinogen oxidase
8. HCN2 ENSGALG00000001342 7506 0.819 - - - - - - - 0.819 - - hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2 [Source:HGNC Symbol;Acc:HGNC:4846]
9. CEP70 ENSGALG00000012087 7992 0.819 - - - - - - - 0.819 - - centrosomal protein 70 [Source:HGNC Symbol;Acc:HGNC:29972]
10. NUP85 ENSGALG00000007974 21249 0.818 - - - - - - - 0.818 - - nucleoporin 85 [Source:NCBI gene;Acc:422120]
11. FAM207A ENSGALG00000007513 8748 0.818 - - - - - - - 0.818 - - family with sequence similarity 207 member A [Source:HGNC Symbol;Acc:HGNC:15811]
12. EBNA1BP2 ENSGALG00000009045 17453 0.814 - - - - - - 0.814 - - - EBNA1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15531]
13. RAB5C ENSGALG00000003359 5597 0.814 - - - - - - - 0.814 - - RAB5C, member RAS oncogene family [Source:NCBI gene;Acc:395197]
14. MFAP1 ENSGALG00000028295 6043 0.812 - - - - - - - 0.812 - - microfibrillar associated protein 1 [Source:NCBI gene;Acc:415586]
15. TMEM258 ENSGALG00000038292 31116 0.81 - - - - - - - 0.810 - - transmembrane protein 258 [Source:NCBI gene;Acc:422964]
16. C4orf27 C4orf27 16724 0.808 - - - - - - 0.808 - - -
17. IFT46 ENSGALG00000007438 4094 0.807 - - - - - - 0.807 - - - intraflagellar transport 46, transcript variant X1
18. CYB5R2 ENSGALG00000032372 7967 0.801 - - - - - - 0.801 - - - cytochrome b5 reductase 2 [Source:NCBI gene;Acc:408182]
19. BLMH ENSGALG00000004259 36907 0.8 - - - - - - - 0.800 - - bleomycin hydrolase [Source:NCBI gene;Acc:395996]
20. ASUN ASUN 17129 0.799 - - - - - - 0.799 - - -
21. SAT1 ENSGALG00000016348 8469 0.799 - - - - - - - 0.799 - - spermidine/spermine N1-acetyltransferase 1 [Source:NCBI gene;Acc:374006]
22. C1H12ORF23 C1H12ORF23 13234 0.799 - - - - - - 0.799 - - -
23. EIF5B ENSGALG00000016764 30681 0.797 - - - - - - - 0.797 - - eukaryotic translation initiation factor 5B [Source:NCBI gene;Acc:395514]
24. TMED2 ENSGALG00000003307 20704 0.789 - - - - - - 0.789 - - - transmembrane p24 trafficking protein 2 [Source:NCBI gene;Acc:416821]
25. MED28 ENSGALG00000007138 7686 0.788 - - - - - - 0.788 - - - mediator complex subunit 28 [Source:HGNC Symbol;Acc:HGNC:24628]
26. AMOTL2 5217 0.783 - - - - - - 0.783 - - - angiomotin like 2, transcript variant X3
27. HOXB3 ENSGALG00000043219 5198 0.783 - - - - - - - 0.783 - - homeobox B3 [Source:NCBI gene;Acc:395502]
28. MRPL37 ENSGALG00000010761 10596 0.782 - - - - - - 0.782 - - - mitochondrial ribosomal protein L37 [Source:NCBI gene;Acc:772313]
29. HEATR1 ENSGALG00000032799 2305 0.782 - - - - - - 0.782 - - - HEAT repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:25517]
30. VATB VATB 13756 0.779 - - - - - - 0.779 - - -
31. RANGAP1 ENSGALG00000011966 20170 0.779 - - - - - - 0.779 - - - Ran GTPase activating protein 1 [Source:NCBI gene;Acc:417997]
32. MRPL50 ENSGALG00000015543 11649 0.779 - - - - - - - 0.779 - - mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
33. NEO1 ENSGALG00000001774 10165 0.778 - - - - - - 0.778 - - - neogenin 1 [Source:HGNC Symbol;Acc:HGNC:7754]
34. WWC3 ENSGALG00000034834 9392 0.778 - - - - - - - 0.778 - - WWC family member 3 [Source:HGNC Symbol;Acc:HGNC:29237]
35. PTCHD1 ENSGALG00000016358 3882 0.777 - - - - - - - 0.777 - - patched domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26392]
36. PLAA ENSGALG00000001782 5459 0.774 - - - - - - 0.774 - - - phospholipase A2 activating protein [Source:HGNC Symbol;Acc:HGNC:9043]
37. TMEM59 ENSGALG00000010746 4669 0.774 - - - - - - 0.774 - - - transmembrane protein 59 [Source:NCBI gene;Acc:424656]
38. ENSGALG00000007514 ENSGALG00000007514 4866 0.774 - - - - - - 0.774 - - -
39. ATG12 ENSGALG00000002345 3607 0.774 - - - - - - 0.774 - - - autophagy related 12 [Source:HGNC Symbol;Acc:HGNC:588]
40. PLEKHA5 ENSGALG00000013134 3656 0.774 - - - - - - - 0.774 - - pleckstrin homology domain containing A5 [Source:HGNC Symbol;Acc:HGNC:30036]
41. BRP44 BRP44 17093 0.773 - - - - - - 0.773 - - -
42. CMAS ENSGALG00000013229 1941 0.772 - - - - - - - 0.772 - - cytidine monophosphate N-acetylneuraminic acid synthetase [Source:HGNC Symbol;Acc:HGNC:18290]
43. POGLUT1 ENSGALG00000015480 12290 0.771 - - - - - - 0.771 - - - protein O-glucosyltransferase 1 [Source:NCBI gene;Acc:418455]
44. WDR4 ENSGALG00000016187 1713 0.77 - - - - - - - 0.770 - - Gallus gallus WD repeat domain 4 (WDR4), mRNA. [Source:RefSeq mRNA;Acc:NM_001321598]
45. LSM5 ENSGALG00000041625 22307 0.769 - - - - - - 0.769 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
46. TTC27 ENSGALG00000010538 9685 0.767 - - - - - - 0.767 - - - tetratricopeptide repeat domain 27 [Source:NCBI gene;Acc:421462]
47. GSTO1 ENSGALG00000008409 7561 0.766 - - - - - - 0.766 - - - glutathione S-transferase omega 1 [Source:NCBI gene;Acc:423881]
48. ATG5 ENSGALG00000015387 7752 0.765 - - - - - - 0.765 - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
49. SMIM12 ENSGALG00000030261 5860 0.763 - - - - - - 0.763 - - - small integral membrane protein 12 [Source:NCBI gene;Acc:100858028]
50. KCNK5 ENSGALG00000034077 3233 0.761 - - - - - - 0.761 - - - potassium two pore domain channel subfamily K member 5 [Source:HGNC Symbol;Acc:HGNC:6280]
51. DGCR2 ENSGALG00000005891 8405 0.76 - - - - - - 0.760 - - - DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
52. CDK5RAP1 ENSGALG00000006738 2628 0.76 - - - - - - 0.760 - - - CDK5 regulatory subunit associated protein 1 [Source:HGNC Symbol;Acc:HGNC:15880]
53. C1GALT1 ENSGALG00000009752 7148 0.758 - - - - - - - 0.758 - - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Source:NCBI gene;Acc:420575]
54. MYBBP1A ENSGALG00000001363 10331 0.758 - - - - - - 0.758 - - - MYB binding protein 1a [Source:HGNC Symbol;Acc:HGNC:7546]
55. PYURF ENSGALG00000039869 5657 0.757 - - - - - - 0.757 - - - PIGY upstream reading frame [Source:HGNC Symbol;Acc:HGNC:44317]
56. RIOK2 ENSGALG00000015288 6280 0.757 - - - - - - 0.757 - - - RIO kinase 2 [Source:NCBI gene;Acc:427278]
57. POLR2D ENSGALG00000002057 14548 0.757 - - - - - 0.757 - - - - RNA polymerase II subunit D [Source:NCBI gene;Acc:424754]
58. REEP5 ENSGALG00000023157 6282 0.756 - - - - - - - 0.756 - - receptor accessory protein 5 [Source:NCBI gene;Acc:770021]
59. FAM177A1 ENSGALG00000010046 4318 0.756 - - - - - - - 0.756 - - family with sequence similarity 177 member A1 [Source:NCBI gene;Acc:423323]
60. ZC3H3 ENSGALG00000043265 1638 0.754 - - - - - - 0.754 - - - zinc finger CCCH-type containing 3 [Source:NCBI gene;Acc:430349]
61. CHM ENSGALG00000006906 4953 0.754 - - - - - - 0.754 - - - CHM, Rab escort protein 1 [Source:NCBI gene;Acc:422266]
62. PTPA ENSGALG00000036965 2366 0.754 - - - - - - - 0.754 - - protein phosphatase 2 phosphatase activator [Source:NCBI gene;Acc:426329]
63. CCDC132 CCDC132 2632 0.752 - - - - - - - 0.752 - -
64. TMEM175 ENSGALG00000015368 3342 0.752 - - - - - - 0.752 - - - transmembrane protein 175 [Source:NCBI gene;Acc:427293]
65. CBWD1 ENSGALG00000010147 2765 0.752 - - - - - - 0.752 - - - COBW domain containing 1 [Source:NCBI gene;Acc:427347]
66. SIPA1L1 ENSGALG00000009381 4019 0.751 - - - - - - 0.751 - - - signal induced proliferation associated 1 like 1 [Source:NCBI gene;Acc:423255]
67. RIC8A ENSGALG00000004191 6094 0.751 - - - - - - 0.751 - - - RIC8 guanine nucleotide exchange factor A [Source:NCBI gene;Acc:422987]
68. MDFIC ENSGALG00000026838 3881 0.751 - - - - - - - 0.751 - - MyoD family inhibitor domain containing [Source:HGNC Symbol;Acc:HGNC:28870]
69. DJ-1 DJ-1 13462 0.75 - - - - - - - 0.750 - -
70. TM4SF18 4553 0.75 - - - - - - - 0.750 - - transmembrane 4 L six family member 18, transcript variant X2
71. TMEM53 ENSGALG00000010110 2588 0.749 - - - - - - - 0.749 - - transmembrane protein 53 [Source:NCBI gene;Acc:424581]
72. GATD3A ENSGALG00000016918 24760 0.748 - - - - - - 0.748 - - - glutamine amidotransferase like class 1 domain containing 3A [Source:NCBI gene;Acc:418811]
73. RABGGTB ENSGALG00000011388 11654 0.748 - - - - - - 0.748 - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
74. SEC22A ENSGALG00000011697 7981 0.748 - - - - - - 0.748 - - - SEC22 homolog A, vesicle trafficking protein [Source:NCBI gene;Acc:424250]
75. NUMB ENSGALG00000009300 4220 0.748 - - - - - - - 0.748 - - NUMB, endocytic adaptor protein [Source:NCBI gene;Acc:395639]
76. POLR2B ENSGALG00000011387 4864 0.748 - - - - - - 0.748 - - - RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
77. CMPK CMPK 9569 0.748 - - - - - - 0.748 - - -
78. MOCS2 ENSGALG00000014906 4974 0.747 - - - - - - 0.747 - - - molybdenum cofactor synthesis 2 [Source:HGNC Symbol;Acc:HGNC:7193]
79. NUDT14 ENSGALG00000028940 3795 0.746 - - - - - - - 0.746 - - nudix hydrolase 14 [Source:NCBI gene;Acc:423501]
80. MAP3K7 ENSGALG00000015596 15164 0.746 - - - - - - 0.746 - - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
81. INTS6L ENSGALG00000006157 2303 0.746 - - - - - - - 0.746 - - integrator complex subunit 6 like, transcript variant X6
82. ENSA ENSGALG00000037480 1619 0.745 - - - - - - - 0.745 - - endosulfine alpha [Source:NCBI gene;Acc:425073]
83. STRADA ENSGALG00000000550 6912 0.745 - - - - - - - 0.745 - - STE20-related kinase adaptor alpha [Source:NCBI gene;Acc:419957]
84. MARK1 ENSGALG00000009483 10350 0.744 - - - - - - 0.744 - - - microtubule affinity regulating kinase 1 [Source:HGNC Symbol;Acc:HGNC:6896]
85. MTO1 ENSGALG00000015923 4418 0.744 - - - - - - 0.744 - - - mitochondrial tRNA translation optimization 1 [Source:NCBI gene;Acc:772297]
86. ATL2 ENSGALG00000037289 7926 0.744 - - - - - - - 0.744 - - atlastin GTPase 2 [Source:HGNC Symbol;Acc:HGNC:24047]
87. NOTCH2 ENSGALG00000002922 3272 0.744 - - - - - - 0.744 - - - notch 2 [Source:NCBI gene;Acc:374031]
88. FAM169B ENSGALG00000007016 870 0.744 - - - - - - 0.744 - - - family with sequence similarity 169 member B [Source:HGNC Symbol;Acc:HGNC:26835]
89. ASPG ENSGALG00000011572 4984 0.744 - - - - - - 0.744 - - - asparaginase [Source:HGNC Symbol;Acc:HGNC:20123]
90. CEP97 ENSGALG00000015342 1117 0.743 - - - - - - 0.743 - - - centrosomal protein 97 [Source:HGNC Symbol;Acc:HGNC:26244]
91. YWHAZ ENSGALG00000031387 84985 0.742 - - - - - - 0.742 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
92. SESN1 ENSGALG00000015286 2387 0.742 - - - - - - - 0.742 - - sestrin 1 [Source:HGNC Symbol;Acc:HGNC:21595]
93. WSB2 ENSGALG00000008151 13246 0.742 - - - - - - 0.742 - - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
94. UBE2J2 ENSGALG00000001848 6527 0.741 - - - - - - 0.741 - - - ubiquitin conjugating enzyme E2 J2 [Source:HGNC Symbol;Acc:HGNC:19268]
95. CPT1A ENSGALG00000007077 3199 0.741 - - - - - - - 0.741 - - carnitine palmitoyltransferase 1A [Source:NCBI gene;Acc:423118]
96. LSM6 ENSGALG00000009985 18582 0.741 - - - - - - 0.741 - - - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:422466]
97. MBSP MBSP 5634 0.741 - - - - - - - 0.741 - -
98. MRPL22 ENSGALG00000003919 2760 0.74 - - - - - - 0.740 - - - mitochondrial ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:14480]
99. TPRKB ENSGALG00000013018 8687 0.74 - - - - - - 0.740 - - - TP53RK binding protein [Source:HGNC Symbol;Acc:HGNC:24259]
100. HMGB3 ENSGALG00000009071 12011 0.74 - - - - - - 0.740 - - - high mobility group box 3 [Source:NCBI gene;Acc:396232]

There are 160 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA