Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PREX1

Gene Name Gene ID Reads Annotation
PREX1 ENSGALG00000004621 48 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:32594]











Genes with expression patterns similar to PREX1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PREX1 ENSGALG00000004621 48 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:32594]
2. CCR5 ENSGALG00000037077 23 1.775 - - - - - - - 1.000 - 0.775 C-C motif chemokine receptor 5 [Source:NCBI gene;Acc:420695]
3. LRRC3B ENSGALG00000011314 26 1.69 - - - - - - - 0.957 - 0.733 leucine rich repeat containing 3B [Source:HGNC Symbol;Acc:HGNC:28105]
4. TMEM178B ENSGALG00000028444 31 1.592 - - - - - - 0.808 0.784 - - transmembrane protein 178B [Source:NCBI gene;Acc:418120]
5. UTS2 ENSGALG00000000556 0 1 - - - - - - - 1.000 - - urotensin 2 [Source:NCBI gene;Acc:404535]
6. SPAG8 2 1 - - - - - - - 1.000 - - sperm associated antigen 8, transcript variant X3
7. VSNL1 ENSGALG00000016464 19 1 - - - - - - - 1.000 - - visinin like 1 [Source:NCBI gene;Acc:396189]
8. GSTT1 ENSGALG00000006344 22 1 - - - - - - - 1.000 - - glutathione S-transferase theta 1 [Source:NCBI gene;Acc:396322]
9. ENSGALG00000024369 ENSGALG00000024369 4 1 - - - - - - - 1.000 - -
10. NR4A3 ENSGALG00000013568 1 1 - - - - - - - 1.000 - - nuclear receptor subfamily 4 group A member 3 [Source:HGNC Symbol;Acc:HGNC:7982]
11. ITM2B ENSGALG00000016996 1112 1 - - - - - - - 1.000 - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
12. ANKFY1 ENSGALG00000001467 21 1 - - - - - - - 1.000 - - ankyrin repeat and FYVE domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20763]
13. TVB TVB 11 1 - - - - - - - 1.000 - -
14. ANKRD42 8 1 - - - - - - - 1.000 - - ankyrin repeat domain 42
15. PLCH2 ENSGALG00000001207 7 1 - - - - - - - 1.000 - - phospholipase C eta 2 [Source:HGNC Symbol;Acc:HGNC:29037]
16. SLC1A2 ENSGALG00000037556 22 1 - - - - - - - 1.000 - - solute carrier family 1 member 2 [Source:NCBI gene;Acc:423156]
17. HERPUD1 ENSGALG00000001220 18 1 - - - - - - - 1.000 - - homocysteine inducible ER protein with ubiquitin like domain 1 [Source:HGNC Symbol;Acc:HGNC:13744]
18. TM6SF2 ENSGALG00000029015 109 1 - - - - - - - 1.000 - - transmembrane 6 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11861]
19. SOS2 ENSGALG00000012273 41 1 - - - - - - - 1.000 - - SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:11188]
20. DYDC1 ENSGALG00000002432 54 1 - - - - - - - 1.000 - - DPY30 domain containing 1 [Source:NCBI gene;Acc:423627]
21. CR1L ENSGALG00000023950 98 1 - - - - - - - 1.000 - - complement C3b/C4b receptor 1 like [Source:NCBI gene;Acc:419853]
22. GTF2E1L ENSGALG00000013600 4 1 - - - - - - - 1.000 - - general transcription factor IIE subunit 1-like
23. REEP1 ENSGALG00000015786 7 1 - - - - - - - 1.000 - - receptor accessory protein 1 [Source:HGNC Symbol;Acc:HGNC:25786]
24. HHAT ENSGALG00000009881 7 1 - - - - - - - 1.000 - - hedgehog acyltransferase [Source:HGNC Symbol;Acc:HGNC:18270]
25. C8orf37 ENSGALG00000038971 5 1 - - - - - - - 1.000 - - chromosome 8 open reading frame 37 [Source:HGNC Symbol;Acc:HGNC:27232]
26. SLC44A1 ENSGALG00000015439 32 1 - - - - - - - 1.000 - - solute carrier family 44 member 1 [Source:HGNC Symbol;Acc:HGNC:18798]
27. MCAM ENSGALG00000030027 26 1 - - - - - - - 1.000 - - melanoma cell adhesion molecule [Source:NCBI gene;Acc:448832]
28. OVCH2 ENSGALG00000005318 8 1 - - - - - - - 1.000 - - ovochymase 2 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:29970]
29. FAM166A ENSGALG00000045172 0 1 - - - - - - - 1.000 - - family with sequence similarity 166 member A [Source:HGNC Symbol;Acc:HGNC:33818]
30. GAL4 GAL4 2 1 - - - - - - - 1.000 - -
31. SVOPL ENSGALG00000012812 27 1 - - - - - - - 1.000 - - SVOP like [Source:HGNC Symbol;Acc:HGNC:27034]
32. MYRFL ENSGALG00000019352 2 1 - - - - - - - 1.000 - - myelin regulatory factor like [Source:HGNC Symbol;Acc:HGNC:26316]
33. GRIA4 ENSGALG00000038995 29 1 - - - - - - - 1.000 - - glutamate ionotropic receptor AMPA type subunit 4 [Source:NCBI gene;Acc:396137]
34. HMGCS2 ENSGALG00000002960 54 1 - - - - - - - 1.000 - - 3-hydroxy-3-methylglutaryl-CoA synthase 2 [Source:HGNC Symbol;Acc:HGNC:5008]
35. PROZ ENSGALG00000016832 6 1 - - - - - - - 1.000 - - protein Z, vitamin K dependent plasma glycoprotein [Source:HGNC Symbol;Acc:HGNC:9460]
36. MIS18A ENSGALG00000015884 25 1 - - - - - - - 1.000 - - MIS18 kinetochore protein A [Source:HGNC Symbol;Acc:HGNC:1286]
37. HPDL ENSGALG00000023348 1 1 - - - - - - - 1.000 - - 4-hydroxyphenylpyruvate dioxygenase like [Source:HGNC Symbol;Acc:HGNC:28242]
38. SLCO2A1 ENSGALG00000006471 18 1 - - - - - - - 1.000 - - solute carrier organic anion transporter family member 2A1 [Source:NCBI gene;Acc:424862]
39. HOPX ENSGALG00000011404 10 1 - - - - - - - 1.000 - - HOP homeobox [Source:NCBI gene;Acc:395241]
40. LZTS2 ENSGALG00000023612 9 1 - - - - - - - 1.000 - - leucine zipper tumor suppressor 2 [Source:HGNC Symbol;Acc:HGNC:29381]
41. IL2RB ENSGALG00000012472 7 1 - - - - - - - 1.000 - - Gallus gallus interleukin 2 receptor subunit beta (IL2RB), mRNA. [Source:RefSeq mRNA;Acc:NM_001318989]
42. ST3GAL2 ENSGALG00000002651 20 1 - - - - - - - 1.000 - - ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [Source:NCBI gene;Acc:395139]
43. SLC10A4 ENSGALG00000033908 300 1 - - - - - - - 1.000 - - solute carrier family 10 member 4 [Source:HGNC Symbol;Acc:HGNC:22980]
44. CAMK2A ENSGALG00000005621 3 1 - - - - - - - 1.000 - - calcium/calmodulin dependent protein kinase II alpha [Source:NCBI gene;Acc:374175]
45. gga-mir-99a ENSGALG00000018242 192 1 - - - - - - - 1.000 - - gga-mir-99a [Source:miRBase;Acc:MI0001173]
46. ENSGALG00000005026 ENSGALG00000005026 9 1 - - - - - - - 1.000 - -
47. ATP6V1H ENSGALG00000013621 13 1 - - - - - - - 1.000 - - ATPase H+ transporting V1 subunit H [Source:NCBI gene;Acc:426199]
48. ENSGALG00000026578 ENSGALG00000026578 4 1 - - - - - - - 1.000 - -
49. PLCE1 ENSGALG00000039528 151 0.995 - - - - - - - 0.995 - - phospholipase C epsilon 1
50. STK38 ENSGALG00000000523 44 0.981 - - - - - - - 0.981 - - serine/threonine kinase 38 [Source:HGNC Symbol;Acc:HGNC:17847]
51. GPCPD1 ENSGALG00000009130 24 0.981 - - - - - - - 0.981 - - Gallus gallus glycerophosphocholine phosphodiesterase 1 (GPCPD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001318987]
52. DRG11 DRG11 32 0.981 - - - - - - - 0.981 - -
53. SASH1 ENSGALG00000012342 28 0.981 - - - - - - - 0.981 - - SAM and SH3 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19182]
54. SORL1 ENSGALG00000006598 39 0.981 - - - - - - - 0.981 - - sortilin related receptor 1 [Source:NCBI gene;Acc:395998]
55. STRADB ENSGALG00000008373 10 0.981 - - - - - - - 0.981 - - STE20-related kinase adaptor beta [Source:HGNC Symbol;Acc:HGNC:13205]
56. BAI3 BAI3 106 0.981 - - - - - - - 0.981 - -
57. CATHL1 ENSGALG00000027973 98 0.981 - - - - - - - 0.981 - - cathelicidin-1 [Source:NCBI gene;Acc:414337]
58. ENSGALG00000005445 ENSGALG00000005445 16 0.938 - - - - - - - 0.938 - -
59. NTRK2 ENSGALG00000012594 24 0.929 - - - - - - - 0.929 - - neurotrophic receptor tyrosine kinase 2 [Source:NCBI gene;Acc:396157]
60. TUB ENSGALG00000005986 85 0.923 - - - - - - - 0.923 - - tubby bipartite transcription factor [Source:HGNC Symbol;Acc:HGNC:12406]
61. LMX1B ENSGALG00000040582 34 0.923 - - - - - - - 0.923 - - LIM homeobox transcription factor 1 beta [Source:NCBI gene;Acc:396312]
62. DDX11 49 0.923 - - - - - - - 0.923 - - DEAD/H-box helicase 11, transcript variant X1
63. RAB13 RAB13 22 0.923 - - - - - - - 0.923 - -
64. ANKFN1 ENSGALG00000003105 15 0.923 - - - - - - - 0.923 - - ankyrin repeat and fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26766]
65. SK2 SK2 74 0.882 - - - - - - - 0.882 - -
66. PEX7 ENSGALG00000013874 34 0.864 - - - - - - 0.864 - - - peroxisomal biogenesis factor 7 [Source:NCBI gene;Acc:421687]
67. SPRTN ENSGALG00000011065 24 0.858 - - - - - - - 0.858 - - SprT-like N-terminal domain [Source:HGNC Symbol;Acc:HGNC:25356]
68. IQUB ENSGALG00000008823 65 0.854 - - - - - - - - - 0.854 IQ motif and ubiquitin domain containing [Source:HGNC Symbol;Acc:HGNC:21995]
69. GJD2 ENSGALG00000009845 236 0.846 - - - - - 0.846 - - - - gap junction protein delta 2 [Source:NCBI gene;Acc:395273]
70. DUSP21 ENSGALG00000007765 171 0.841 - - - - - - 0.841 - - - dual specificity phosphatase 21 [Source:HGNC Symbol;Acc:HGNC:20476]
71. SPINK4 ENSGALG00000043964 50 0.831 - - - - - - - - - 0.831 serine peptidase inhibitor, Kazal type 4 [Source:HGNC Symbol;Acc:HGNC:16646]
72. ENSGALG00000023119 ENSGALG00000023119 156 0.827 - - - - - - - - - 0.827
73. PRSS12 ENSGALG00000012004 53 0.826 - - - - 0.826 - - - - - serine protease 12 [Source:HGNC Symbol;Acc:HGNC:9477]
74. HDAC10 ENSGALG00000041251 57 0.824 - - - - - - - 0.824 - - histone deacetylase 10 [Source:HGNC Symbol;Acc:HGNC:18128]
75. FSD1L ENSGALG00000015442 106 0.823 - - - - - - - 0.823 - - fibronectin type III and SPRY domain containing 1 like [Source:HGNC Symbol;Acc:HGNC:13753]
76. WDR6 ENSGALG00000006936 175 0.823 - - - - - - 0.823 - - - WD repeat domain 6 [Source:HGNC Symbol;Acc:HGNC:12758]
77. AMY2A ENSGALG00000038740 102 0.823 - - - - - - - 0.823 - - amylase, alpha 2A (pancreatic) [Source:NCBI gene;Acc:414140]
78. CTH ENSGALG00000011331 2390 0.823 - - - - - - - 0.823 - - cystathionine gamma-lyase [Source:HGNC Symbol;Acc:HGNC:2501]
79. SYNJ2 ENSGALG00000013727 17 0.822 - - - - - - 0.822 - - - synaptojanin 2 [Source:HGNC Symbol;Acc:HGNC:11504]
80. ANTXR2 ENSGALG00000043675 52 0.822 - - - - - - 0.822 - - - ANTXR cell adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:21732]
81. HINFP ENSGALG00000006806 15 0.822 - - - - - - 0.822 - - - histone H4 transcription factor [Source:HGNC Symbol;Acc:HGNC:17850]
82. SRGAP2 ENSGALG00000000816 97 0.822 - - - - - - 0.822 - - - SLIT-ROBO Rho GTPase activating protein 2, transcript variant X11
83. ZDHHC8 ENSGALG00000002124 35 0.822 - - - - - - 0.822 - - - zinc finger DHHC-type containing 8 [Source:NCBI gene;Acc:416788]
84. ISPD ENSGALG00000010795 7 0.821 - - - - - - - - - 0.821 isoprenoid synthase domain containing [Source:HGNC Symbol;Acc:HGNC:37276]
85. ENSGALG00000027412 ENSGALG00000027412 202 0.816 - - - - - - 0.816 - - -
86. ENSGALG00000026142 ENSGALG00000026142 85 0.814 - - - - - - 0.814 - - -
87. SYNJ2BP ENSGALG00000009387, ENSGALG00000035537 124 0.812 - - - - - - - 0.812 - - synaptojanin 2 binding protein, transcript variant X2
88. ST6GAL2 ENSGALG00000016803 24 0.811 - - - - - - 0.811 - - - ST6 beta-galactoside alpha-2,6-sialyltransferase 2 [Source:NCBI gene;Acc:403122]
89. EEA1 ENSGALG00000011280 923 0.808 - - - - - - 0.808 - - - early endosome antigen 1 [Source:HGNC Symbol;Acc:HGNC:3185]
90. AOC1 13 0.808 - - 0.808 - - - - - - - amine oxidase, copper containing 1, transcript variant X2
91. ASIC2 ENSGALG00000000367 72 0.806 - - - - - - 0.806 - - - acid sensing ion channel subunit 2, transcript variant X2
92. PPM1F ENSGALG00000039121 26 0.805 - - - - - - 0.805 - - - protein phosphatase, Mg2+/Mn2+ dependent 1F [Source:HGNC Symbol;Acc:HGNC:19388]
93. ALDH6A1 ENSGALG00000010211 29 0.803 - - - - - - 0.803 - - - aldehyde dehydrogenase 6 family member A1 [Source:HGNC Symbol;Acc:HGNC:7179]
94. IMPG2 ENSGALG00000015322 74 0.802 - - - - - - 0.802 - - - interphotoreceptor matrix proteoglycan 2 [Source:NCBI gene;Acc:418393]
95. CCDC175 17 0.801 - - - - - - 0.801 - - - coiled-coil domain containing 175
96. KCTD8 ENSGALG00000014225 47 0.8 - - - - - - 0.800 - - - potassium channel tetramerization domain containing 8 [Source:HGNC Symbol;Acc:HGNC:22394]
97. OSBPL10 45 0.8 - - - - - - 0.800 - - - oxysterol binding protein like 10
98. ZDHHC22 ENSGALG00000023099 10 0.8 - - - - - - 0.800 - - - zinc finger DHHC-type containing 22 [Source:HGNC Symbol;Acc:HGNC:20106]
99. TGFBRAP1 ENSGALG00000016795 81 0.8 - - - - - - 0.800 - - - transforming growth factor beta receptor associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16836]
100. TRERF1 ENSGALG00000009896 42 0.798 - - - - - - 0.798 - - - transcriptional regulating factor 1 [Source:HGNC Symbol;Acc:HGNC:18273]

There are 149 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA