Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PRDX6

Gene Name Gene ID Reads Annotation
PRDX6 ENSGALG00000003053 17928 peroxiredoxin 6 [Source:NCBI gene;Acc:429062]











Genes with expression patterns similar to PRDX6

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PRDX6 ENSGALG00000003053 17928 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 peroxiredoxin 6 [Source:NCBI gene;Acc:429062]
2. M6PR ENSGALG00000031681 9442 1.757 - - - - - - 0.991 0.766 - - mannose-6-phosphate receptor, cation dependent, transcript variant X3
3. MOB3A ENSGALG00000031729 9690 1.747 - - - - - - 0.993 0.754 - - MOB kinase activator 3A [Source:HGNC Symbol;Acc:HGNC:29802]
4. FAM103A1 17380 0.997 - - - - - - 0.997 - - - family with sequence similarity 103 member A1, transcript variant X2
5. MCM2 ENSGALG00000006037 13458 0.996 - - - - - - 0.996 - - - minichromosome maintenance complex component 2 [Source:NCBI gene;Acc:416027]
6. DDX21 ENSGALG00000004144 13105 0.994 - - - - - - 0.994 - - - DExD-box helicase 21 [Source:HGNC Symbol;Acc:HGNC:2744]
7. EIF3J ENSGALG00000008187 43570 0.992 - - - - - - 0.992 - - - eukaryotic translation initiation factor 3 subunit J [Source:NCBI gene;Acc:415573]
8. ENSGALG00000004773 ENSGALG00000004773 10418 0.992 - - - - - - 0.992 - - -
9. IMP4 ENSGALG00000029152 11669 0.992 - - - - - - 0.992 - - - IMP4, U3 small nucleolar ribonucleoprotein [Source:NCBI gene;Acc:100857200]
10. HOXD8 ENSGALG00000037272 4338 0.991 - - - - - - 0.991 - - - homeobox D8 [Source:NCBI gene;Acc:396301]
11. PTBP2 ENSGALG00000005552 3443 0.991 - - - - - - 0.991 - - - polypyrimidine tract binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17662]
12. POLR2D ENSGALG00000002057 14548 0.991 - - - - - - 0.991 - - - RNA polymerase II subunit D [Source:NCBI gene;Acc:424754]
13. CTU2 4818 0.991 - - - - - - 0.991 - - - cytosolic thiouridylase subunit 2, transcript variant X3
14. EGFLAM ENSGALG00000003726 4588 0.991 - - - - - - 0.991 - - - EGF like, fibronectin type III and laminin G domains, transcript variant X1
15. POLR1C ENSGALG00000010349 7059 0.991 - - - - - - 0.991 - - - RNA polymerase I and III subunit C [Source:NCBI gene;Acc:421452]
16. TMEM120B ENSGALG00000004254 2819 0.99 - - - - - - 0.990 - - - transmembrane protein 120B [Source:NCBI gene;Acc:416847]
17. CAND1 4541 0.99 - - - - - - 0.990 - - - cullin associated and neddylation dissociated 1
18. TMC1 ENSGALG00000015145 1180 0.99 - - - - - - 0.990 - - - transmembrane channel like 1 [Source:NCBI gene;Acc:427255]
19. TMEM62 ENSGALG00000009260 1170 0.99 - - - - - - 0.990 - - - transmembrane protein 62 [Source:HGNC Symbol;Acc:HGNC:26269]
20. TMEM97 ENSGALG00000005702 2037 0.99 - - - - - - 0.990 - - - transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
21. ENSGALG00000014190 ENSGALG00000014190 5735 0.99 - - - - - - 0.990 - - -
22. ABCC10 2213 0.99 - - - - - - 0.990 - - - ATP binding cassette subfamily C member 10, transcript variant X10
23. BMP3 ENSGALG00000035052 3260 0.99 - - - - - - 0.990 - - - bone morphogenetic protein 3 [Source:NCBI gene;Acc:422581]
24. MRPL32 ENSGALG00000037258 6861 0.99 - - - - - - 0.990 - - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
25. PFDN4 ENSGALG00000007792 26514 0.988 - - - - - - 0.988 - - - prefoldin subunit 4 [Source:NCBI gene;Acc:419337]
26. FBN3 ENSGALG00000037625 23313 0.988 - - - - - - 0.988 - - - fibrillin 3 [Source:HGNC Symbol;Acc:HGNC:18794]
27. PHGDH ENSGALG00000002988 6912 0.986 - - - - - - 0.986 - - - phosphoglycerate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:8923]
28. ATP5MC1 ENSGALG00000001330 37766 0.986 - - - - - - 0.986 - - - ATP synthase membrane subunit c locus 1 [Source:HGNC Symbol;Acc:HGNC:841]
29. DYNLL2 ENSGALG00000005522 17107 0.982 - - - - - - 0.982 - - - dynein light chain LC8-type 2 [Source:NCBI gene;Acc:417663]
30. ITGA1 ENSGALG00000014891 11378 0.981 - - - - - - 0.981 - - - integrin subunit alpha 1 [Source:NCBI gene;Acc:395951]
31. DENR ENSGALG00000003795 30805 0.981 - - - - - - 0.981 - - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
32. SMC2 ENSGALG00000015691 34013 0.979 - - - - - - 0.979 - - - structural maintenance of chromosomes 2 [Source:NCBI gene;Acc:396156]
33. CHNTHL1 CHNTHL1 4976 0.979 - - - - - - 0.979 - - -
34. CALM_1 CALM_1 57812 0.949 - - - - - - 0.949 - - -
35. ALDH1A2 ENSGALG00000004270 49483 0.938 - - - - - - 0.938 - - - aldehyde dehydrogenase 1 family member A2 [Source:NCBI gene;Acc:395844]
36. UQCRFS1 ENSGALG00000025819 66637 0.935 - - - - - - 0.935 - - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:NCBI gene;Acc:415752]
37. ATP2A2 ENSGALG00000032287 12734 0.908 - - - - - - 0.908 - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 [Source:NCBI gene;Acc:396446]
38. RCN2 ENSGALG00000039284 17848 0.854 - - - - - - - 0.854 - - reticulocalbin 2 [Source:NCBI gene;Acc:415350]
39. APITD1 APITD1 11830 0.844 - - - - - - - 0.844 - -
40. SH3BGRL ENSGALG00000007128 18708 0.842 - - - - - - - 0.842 - - SH3 domain binding glutamate rich protein like [Source:NCBI gene;Acc:422277]
41. PARVB ENSGALG00000014201 27559 0.835 - - - - - - 0.835 - - - parvin beta [Source:HGNC Symbol;Acc:HGNC:14653]
42. CHMP4B ENSGALG00000002095 17422 0.834 - - - - - - - 0.834 - - charged multivesicular body protein 4B [Source:NCBI gene;Acc:419150]
43. FKBP7 ENSGALG00000009149 6742 0.828 - - - - - - - 0.828 - - FK506 binding protein 7 [Source:HGNC Symbol;Acc:HGNC:3723]
44. TXN2 ENSGALG00000012532 12518 0.828 - - - - - - - 0.828 - - thioredoxin 2 [Source:NCBI gene;Acc:426978]
45. TM2D2 ENSGALG00000003356 7088 0.822 - - - - - - - 0.822 - - TM2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24127]
46. TIMMDC1 ENSGALG00000024480 9337 0.821 - - - - - - - 0.821 - - translocase of inner mitochondrial membrane domain containing 1 [Source:NCBI gene;Acc:418453]
47. AZIN1 ENSGALG00000029295 11085 0.815 - - - - - - - 0.815 - - antizyme inhibitor 1 [Source:NCBI gene;Acc:420254]
48. CHERP ENSGALG00000003824 11489 0.808 - - - - - - 0.808 - - - calcium homeostasis endoplasmic reticulum protein [Source:NCBI gene;Acc:420144]
49. POLR2E ENSGALG00000002591 26405 0.807 - - - - - - 0.807 - - - RNA polymerase II subunit E [Source:HGNC Symbol;Acc:HGNC:9192]
50. PSAP ENSGALG00000004769 14759 0.806 - - - - - - - 0.806 - - prosaposin [Source:NCBI gene;Acc:395602]
51. MAEA ENSGALG00000013310 13230 0.805 - - - - - - - 0.805 - - macrophage erythroblast attacher [Source:NCBI gene;Acc:426024]
52. GNAI2 ENSGALG00000035645 9535 0.802 - - - - - - - 0.802 - - G protein subunit alpha i2 [Source:HGNC Symbol;Acc:HGNC:4385]
53. RNF11 ENSGALG00000010539 8617 0.802 - - - - - - - 0.802 - - ring finger protein 11 [Source:NCBI gene;Acc:424631]
54. COX17 ENSGALG00000014981 5646 0.801 - - - - - - - 0.801 - - COX17, cytochrome c oxidase copper chaperone [Source:NCBI gene;Acc:770190]
55. TSEN15 ENSGALG00000004782 2520 0.799 - - - - - - - 0.799 - - tRNA splicing endonuclease subunit 15 [Source:HGNC Symbol;Acc:HGNC:16791]
56. ENSGALG00000004283 ENSGALG00000004283 4771 0.798 - - - - - - - 0.798 - -
57. PAPSS1 ENSGALG00000010542 5631 0.795 - - - - - - - 0.795 - - 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:8603]
58. CNI CNI 18453 0.794 - - - - - - - 0.794 - -
59. TBRG4 ENSGALG00000038102 9269 0.794 - - - - - - - 0.794 - - transforming growth factor beta regulator 4 [Source:HGNC Symbol;Acc:HGNC:17443]
60. ENSGALG00000007035 ENSGALG00000007035 8473 0.792 - - - - - - - 0.792 - -
61. NDUFS5 ENSGALG00000003625 27698 0.792 - - - - - - - 0.792 - - NADH:ubiquinone oxidoreductase subunit S5 [Source:HGNC Symbol;Acc:HGNC:7712]
62. COMMD3 ENSGALG00000007900 8629 0.792 - - - - - - - 0.792 - - COMM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:23332]
63. FUBP3 ENSGALG00000003941 12667 0.79 - - - - - - - 0.790 - - far upstream element binding protein 3 [Source:NCBI gene;Acc:417184]
64. CCDC47 ENSGALG00000000564 6584 0.789 - - - - - - - 0.789 - - coiled-coil domain containing 47 [Source:HGNC Symbol;Acc:HGNC:24856]
65. ADSL ENSGALG00000012034 10280 0.789 - - - - - - - 0.789 - - adenylosuccinate lyase [Source:NCBI gene;Acc:396540]
66. BZW2 ENSGALG00000010809 29213 0.789 - - - - - - - 0.789 - - basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
67. HERPUD2 ENSGALG00000040364 6073 0.787 - - - - - - - 0.787 - - HERPUD family member 2 [Source:HGNC Symbol;Acc:HGNC:21915]
68. TFDP2 ENSGALG00000025759 13407 0.786 - - - - - - - 0.786 - - transcription factor Dp-2 [Source:NCBI gene;Acc:424780]
69. CTSL2 CTSL2 7966 0.786 - - - - - - - 0.786 - -
70. WSB2 ENSGALG00000008151 13246 0.785 - - - - - - - 0.785 - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
71. ENSGALG00000026802 ENSGALG00000026802 14688 0.784 - - - - - - - 0.784 - -
72. NENF ENSGALG00000009821 4826 0.783 - - - - - - - 0.783 - - neudesin neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:30384]
73. XPA ENSGALG00000028998 8621 0.782 - - - - - - - 0.782 - - XPA, DNA damage recognition and repair factor [Source:NCBI gene;Acc:395659]
74. DNMT3A ENSGALG00000041454 9607 0.781 - - - - - - - 0.781 - - DNA methyltransferase 3 alpha [Source:NCBI gene;Acc:421991]
75. TFB2M ENSGALG00000010651 4374 0.78 - - - - - - - 0.780 - - transcription factor B2, mitochondrial
76. DERA ENSGALG00000013095 4135 0.778 - - - - - - - 0.778 - - deoxyribose-phosphate aldolase [Source:NCBI gene;Acc:418176]
77. FAM63B 3793 0.778 - - - - - - - 0.778 - - family with sequence similarity 63 member B
78. CALML4 ENSGALG00000007979 6395 0.777 - - - - - - - 0.777 - - calmodulin like 4 [Source:NCBI gene;Acc:427515]
79. Sep-09 Sep-09 4723 0.777 - - - - - - - 0.777 - -
80. MPI ENSGALG00000029296 11781 0.776 - - - - - - - 0.776 - - mannose phosphate isomerase [Source:HGNC Symbol;Acc:HGNC:7216]
81. MSH2 ENSGALG00000008962 9709 0.775 - - - - - - - 0.775 - - mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325]
82. COIL ENSGALG00000003158 7806 0.774 - - - - - - - 0.774 - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
83. ERLIN2 ENSGALG00000003092 18251 0.773 - - - - - - - 0.773 - - ER lipid raft associated 2 [Source:HGNC Symbol;Acc:HGNC:1356]
84. gga-mir-6643 ENSGALG00000027935 4442 0.773 - - - - - - - 0.773 - - gga-mir-6643 [Source:miRBase;Acc:MI0022462]
85. PLK1 ENSGALG00000006110 12892 0.772 - - - - - - - 0.772 - - polo like kinase 1 [Source:NCBI gene;Acc:416575]
86. BAG1 ENSGALG00000013157 4014 0.772 - - - - - - - 0.772 - - BCL2 associated athanogene 1 [Source:NCBI gene;Acc:420967]
87. PSMD13 ENSGALG00000043684 14720 0.769 - - - - - - - 0.769 - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
88. PBRM1 ENSGALG00000037455 6450 0.769 - - - - - - - 0.769 - - polybromo 1 [Source:NCBI gene;Acc:396074]
89. FAM207A ENSGALG00000007513 8748 0.768 - - - - - - - 0.768 - - family with sequence similarity 207 member A [Source:HGNC Symbol;Acc:HGNC:15811]
90. BNIP3L ENSGALG00000043405 10316 0.768 - - - - - - - 0.768 - - BCL2 interacting protein 3 like [Source:NCBI gene;Acc:419522]
91. STK3 ENSGALG00000032850 6339 0.767 - - - - - - - 0.767 - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
92. UFL1 ENSGALG00000015580 3845 0.767 - - - - - - - 0.767 - - UFM1 specific ligase 1 [Source:NCBI gene;Acc:421804]
93. DCPS ENSGALG00000031143 10191 0.765 - - - - - - - 0.765 - - decapping enzyme, scavenger [Source:HGNC Symbol;Acc:HGNC:29812]
94. PSMD6 ENSGALG00000007315 3906 0.765 - - - - - - - 0.765 - - proteasome 26S subunit, non-ATPase 6 [Source:HGNC Symbol;Acc:HGNC:9564]
95. CTDSPL2 ENSGALG00000008199 3534 0.765 - - - - - - - 0.765 - - CTD small phosphatase like 2 [Source:NCBI gene;Acc:415574]
96. C1orf198 ENSGALG00000026600 5651 0.765 - - - - - - - 0.765 - - chromosome 1 open reading frame 198 [Source:HGNC Symbol;Acc:HGNC:25900]
97. APP ENSGALG00000015770 9438 0.763 - - - - - - - 0.763 - - amyloid beta (A4) precursor protein [Source:NCBI gene;Acc:374198]
98. PPP2R5A ENSGALG00000009828 10309 0.763 - - - - - - - 0.763 - - protein phosphatase 2 regulatory subunit B'alpha [Source:HGNC Symbol;Acc:HGNC:9309]
99. MGST3 ENSGALG00000003445 50408 0.763 - - - - - - 0.763 - - - microsomal glutathione S-transferase 3 [Source:NCBI gene;Acc:424404]
100. FAM96B 14435 0.763 - - - - - - - 0.763 - - family with sequence similarity 96 member B

There are 193 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA