Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for PRDX4

Gene Name Gene ID Reads Annotation
PRDX4 ENSGALG00000016357 32208 peroxiredoxin 4 [Source:HGNC Symbol;Acc:HGNC:17169]











Genes with expression patterns similar to PRDX4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PRDX4 ENSGALG00000016357 32208 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 peroxiredoxin 4 [Source:HGNC Symbol;Acc:HGNC:17169]
2. COMMD8 ENSGALG00000026279 13509 1.676 - - - - 0.857 - 0.819 - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
3. STRAP ENSGALG00000013092 13100 1.645 - - - - 0.844 - - 0.801 - - serine/threonine kinase receptor associated protein [Source:NCBI gene;Acc:418175]
4. NDUFA8 ENSGALG00000040987 49453 1.611 - - - - 0.862 - - 0.749 - - NADH:ubiquinone oxidoreductase subunit A8 [Source:NCBI gene;Acc:417112]
5. UBE2N ENSGALG00000030515 32059 1.586 - - - - 0.830 - 0.756 - - - ubiquitin conjugating enzyme E2 N [Source:NCBI gene;Acc:417898]
6. PSMD13 ENSGALG00000043684 14720 1.522 - - - - - - 0.801 0.721 - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
7. NDUFA11 ENSGALG00000021692 75804 1.457 - - - - 0.707 - 0.750 - - - NADH:ubiquinone oxidoreductase subunit A11
8. SAAL1 ENSGALG00000026111 8340 0.971 - - - - - - 0.971 - - - serum amyloid A like 1
9. CDC27 ENSGALG00000000596 12014 0.959 - - - - - - 0.959 - - - cell division cycle 27 [Source:NCBI gene;Acc:419960]
10. LOC407092 ENSGALG00000013809 10706 0.939 - - - - - - 0.939 - - - AD012Z, transcript variant X5
11. SNX17 ENSGALG00000032468 13519 0.939 - - - - - - 0.939 - - - sorting nexin 17 [Source:HGNC Symbol;Acc:HGNC:14979]
12. DDX18 ENSGALG00000012147 12463 0.938 - - - - - - 0.938 - - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
13. TAF12 ENSGALG00000000991 8709 0.937 - - - - - - 0.937 - - - TATA-box binding protein associated factor 12 [Source:NCBI gene;Acc:419585]
14. STAG2 ENSGALG00000008482 13629 0.936 - - - - - - 0.936 - - - stromal antigen 2 [Source:HGNC Symbol;Acc:HGNC:11355]
15. VDAC3 ENSGALG00000041463 21595 0.934 - - - - - - 0.934 - - - voltage dependent anion channel 3, transcript variant X9
16. C20H20ORF24 ENSGALG00000001054 22026 0.91 - - - - 0.910 - - - - - chromosome 20 open reading frame, human C20orf24 [Source:NCBI gene;Acc:768550]
17. CHPKCI CHPKCI 36217 0.898 - - - - - - 0.898 - - -
18. DYNLRB1 ENSGALG00000034509 28361 0.896 - - - - 0.896 - - - - - dynein light chain roadblock-type 1
19. RCC2 ENSGALG00000031684 28067 0.894 - - - - - - - 0.894 - - regulator of chromosome condensation 2 [Source:HGNC Symbol;Acc:HGNC:30297]
20. PSPC1 ENSGALG00000017142 13036 0.891 - - - - 0.891 - - - - - paraspeckle component 1 [Source:NCBI gene;Acc:418955]
21. PCBP4 ENSGALG00000027695 7937 0.89 - - - - 0.890 - - - - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
22. LARP1 ENSGALG00000040109 14808 0.889 - - - - 0.889 - - - - - La ribonucleoprotein domain family member 1 [Source:HGNC Symbol;Acc:HGNC:29531]
23. SRSF3 ENSGALG00000000533 51281 0.888 - - - - 0.888 - - - - - serine and arginine rich splicing factor 3 [Source:NCBI gene;Acc:419815]
24. SKP2 ENSGALG00000003547 14637 0.881 - - - - 0.881 - - - - - S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]
25. IDH1 ENSGALG00000008818 17613 0.88 - - - - - - - 0.880 - - isocitrate dehydrogenase (NADP(+)) 1, cytosolic [Source:HGNC Symbol;Acc:HGNC:5382]
26. OLA1 ENSGALG00000009325 26414 0.878 - - - - 0.878 - - - - - Obg like ATPase 1 [Source:NCBI gene;Acc:424144]
27. CCT4 ENSGALG00000008812 78267 0.874 - - - - 0.874 - - - - - chaperonin containing TCP1 subunit 4 [Source:NCBI gene;Acc:395414]
28. RPL24 ENSGALG00000015339 227460 0.872 - - - - 0.872 - - - - - ribosomal protein L24 [Source:NCBI gene;Acc:418401]
29. KPNA3 ENSGALG00000017009 17330 0.87 - - - - 0.870 - - - - - karyopherin subunit alpha 3 [Source:NCBI gene;Acc:418870]
30. PSMC2 ENSGALG00000008236 25980 0.866 - - - - 0.866 - - - - - proteasome 26S subunit, ATPase 2 [Source:NCBI gene;Acc:417716]
31. OGT ENSGALG00000005425 31074 0.865 - - - - 0.865 - - - - - O-linked N-acetylglucosamine (GlcNAc) transferase [Source:HGNC Symbol;Acc:HGNC:8127]
32. PNRC2 ENSGALG00000004122 19228 0.865 - - - - 0.865 - - - - - proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
33. ADD3 ENSGALG00000008542 13814 0.865 - - - - 0.865 - - - - - adducin 3 (gamma) [Source:NCBI gene;Acc:373892]
34. SFSWAP ENSGALG00000002487 9977 0.863 - - - - 0.863 - - - - - splicing factor SWAP [Source:HGNC Symbol;Acc:HGNC:10790]
35. TMEM165 ENSGALG00000027886 5468 0.863 - - - - 0.863 - - - - - transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]
36. METTL23 ENSGALG00000001790 7906 0.863 - - - - 0.863 - - - - - methyltransferase like 23 [Source:HGNC Symbol;Acc:HGNC:26988]
37. MRPS25 ENSGALG00000008506 12131 0.862 - - - - 0.862 - - - - - mitochondrial ribosomal protein S25 [Source:NCBI gene;Acc:416129]
38. MRPL23 ENSGALG00000006561 13737 0.862 - - - - 0.862 - - - - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]
39. FERMT2 ENSGALG00000012425 5480 0.862 - - - - 0.862 - - - - - fermitin family member 2 [Source:HGNC Symbol;Acc:HGNC:15767]
40. ATP5A1 ATP5A1 32367 0.859 - - - - 0.859 - - - - -
41. FBXO9 ENSGALG00000016320 9600 0.858 - - - - 0.858 - - - - - F-box protein 9 [Source:NCBI gene;Acc:421895]
42. REEP5 ENSGALG00000023157 6282 0.857 - - - - 0.857 - - - - - receptor accessory protein 5 [Source:NCBI gene;Acc:770021]
43. FH ENSGALG00000013165 13669 0.857 - - - - 0.857 - - - - - fumarate hydratase [Source:NCBI gene;Acc:420969]
44. TBCA ENSGALG00000004353 18510 0.857 - - - - 0.857 - - - - - tubulin folding cofactor A [Source:NCBI gene;Acc:416367]
45. ENSGALG00000014852 ENSGALG00000014852 15288 0.856 - - - - 0.856 - - - - -
46. SHROOM2 ENSGALG00000030802 4517 0.855 - - - - 0.855 - - - - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
47. CSNK1G1 ENSGALG00000030812 31618 0.855 - - - - 0.855 - - - - - casein kinase 1 gamma 1 [Source:NCBI gene;Acc:415328]
48. BTF3 ENSGALG00000013512 33962 0.855 - - - - - - 0.855 - - - basic transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:1125]
49. SIRT1 ENSGALG00000002761 9028 0.854 - - - - 0.854 - - - - - sirtuin 1 [Source:NCBI gene;Acc:423646]
50. DHFR ENSGALG00000026757 18478 0.854 - - - - 0.854 - - - - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
51. PUM1 ENSGALG00000042598 9392 0.854 - - - - 0.854 - - - - - pumilio RNA binding family member 1 [Source:NCBI gene;Acc:419554]
52. ATG5 ENSGALG00000015387 7752 0.854 - - - - 0.854 - - - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
53. LY6E ENSGALG00000041621 16227 0.853 - - - - 0.853 - - - - - lymphocyte antigen 6 family member E [Source:NCBI gene;Acc:395550]
54. STK3 ENSGALG00000032850 6339 0.853 - - - - 0.853 - - - - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
55. NAP1L1 ENSGALG00000010238 14506 0.852 - - - - 0.852 - - - - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
56. SDOS SDOS 66125 0.851 - - - - 0.851 - - - - -
57. SAR1B ENSGALG00000038753 6493 0.851 - - - - 0.851 - - - - - secretion associated Ras related GTPase 1B [Source:NCBI gene;Acc:416314]
58. NOP58 ENSGALG00000008454 34630 0.851 - - - - 0.851 - - - - - NOP58 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:29926]
59. SSR2 ENSGALG00000000764 32190 0.85 - - - - 0.850 - - - - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
60. GFPT1 ENSGALG00000036391 14025 0.848 - - - - 0.848 - - - - - glutamine--fructose-6-phosphate transaminase 1 [Source:NCBI gene;Acc:419514]
61. NAA25 ENSGALG00000041821 12729 0.848 - - - - 0.848 - - - - - N(alpha)-acetyltransferase 25, NatB auxiliary subunit [Source:NCBI gene;Acc:416883]
62. LATS2 4776 0.847 - - - - 0.847 - - - - - large tumor suppressor kinase 2
63. WDR82 ENSGALG00000025904 4783 0.847 - - - - 0.847 - - - - - WD repeat domain 82 [Source:NCBI gene;Acc:415942]
64. ATP2A2 ENSGALG00000032287 12734 0.847 - - - - 0.847 - - - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 [Source:NCBI gene;Acc:396446]
65. PAPOLA ENSGALG00000033099 20532 0.847 - - - - 0.847 - - - - - poly(A) polymerase alpha [Source:NCBI gene;Acc:395878]
66. TK2 ENSGALG00000034216 5394 0.847 - - - - 0.847 - - - - - thymidine kinase 2, mitochondrial [Source:NCBI gene;Acc:427551]
67. TLK2 ENSGALG00000000410 4690 0.846 - - - - 0.846 - - - - - tousled like kinase 2 [Source:HGNC Symbol;Acc:HGNC:11842]
68. TCP11L1 ENSGALG00000011688 2427 0.846 - - - - 0.846 - - - - - t-complex 11 like 1 [Source:NCBI gene;Acc:421594]
69. MRPS27 ENSGALG00000015002 6541 0.846 - - - - 0.846 - - - - - mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]
70. COIL ENSGALG00000003158 7806 0.844 - - - - 0.844 - - - - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
71. RANGAP1 ENSGALG00000011966 20170 0.843 - - - - 0.843 - - - - - Ran GTPase activating protein 1 [Source:NCBI gene;Acc:417997]
72. MKI67 ENSGALG00000025996 28136 0.843 - - - - 0.843 - - - - - marker of proliferation Ki-67, transcript variant X3
73. TLCD1 ENSGALG00000003973 17569 0.842 - - - - 0.842 - - - - - TLC domain containing 1 [Source:NCBI gene;Acc:417575]
74. GBAS 18453 0.842 - - - - 0.842 - - - - - glioblastoma amplified sequence
75. KNOP1 ENSGALG00000002042 6251 0.842 - - - - 0.842 - - - - - lysine-rich nucleolar protein 1, transcript variant X1
76. IGBP1 ENSGALG00000044628 9200 0.842 - - - - 0.842 - - - - - immunoglobulin (CD79A) binding protein 1, transcript variant X3
77. CDC42SE2 ENSGALG00000027258 4725 0.841 - - - - 0.841 - - - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
78. CZH9ORF41 CZH9ORF41 3492 0.84 - - - - 0.840 - - - - -
79. CBWD1 ENSGALG00000010147 2765 0.84 - - - - 0.840 - - - - - COBW domain containing 1 [Source:NCBI gene;Acc:427347]
80. TRAPPC12 ENSGALG00000016387 2593 0.839 - - - - 0.839 - - - - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
81. BAG4 ENSGALG00000003254 5751 0.839 - - - - 0.839 - - - - - BCL2 associated athanogene 4 [Source:HGNC Symbol;Acc:HGNC:940]
82. ZBTB10 ENSGALG00000034376 3271 0.839 - - - - 0.839 - - - - - zinc finger and BTB domain containing 10 [Source:HGNC Symbol;Acc:HGNC:30953]
83. EAPP ENSGALG00000010007 5080 0.838 - - - - 0.838 - - - - - E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
84. POLR2B ENSGALG00000011387 4864 0.837 - - - - 0.837 - - - - - RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
85. DNAJC12 ENSGALG00000002769 1418 0.836 - - - - 0.836 - - - - - DnaJ heat shock protein family (Hsp40) member C12 [Source:NCBI gene;Acc:423647]
86. RCAN3 ENSGALG00000004282 7778 0.835 - - - - 0.835 - - - - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
87. ELL2 ENSGALG00000014678 1111 0.835 - - - - 0.835 - - - - - elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
88. ENSGALG00000011687 ENSGALG00000011687 4553 0.834 - - - - 0.834 - - - - -
89. XPO7 ENSGALG00000001838 1875 0.834 - - - - 0.834 - - - - - exportin 7 [Source:NCBI gene;Acc:426925]
90. RABEP1 ENSGALG00000001737 2650 0.834 - - - - 0.834 - - - - - rabaptin, RAB GTPase binding effector protein 1 [Source:NCBI gene;Acc:395930]
91. REST 2394 0.833 - - - - 0.833 - - - - - RE1 silencing transcription factor
92. SSPN ENSGALG00000014042 638 0.833 - - - - 0.833 - - - - - sarcospan [Source:HGNC Symbol;Acc:HGNC:11322]
93. IGF1R ENSGALG00000040651 772 0.833 - - - - 0.833 - - - - - insulin like growth factor 1 receptor [Source:NCBI gene;Acc:395889]
94. CTSZ ENSGALG00000007462 630 0.833 - - - - 0.833 - - - - - cathepsin Z [Source:HGNC Symbol;Acc:HGNC:2547]
95. POLR3F ENSGALG00000008749 5645 0.832 - - - - 0.832 - - - - - RNA polymerase III subunit F [Source:NCBI gene;Acc:416723]
96. DDX55 ENSGALG00000003298 2315 0.831 - - - - 0.831 - - - - - DEAD-box helicase 55 [Source:NCBI gene;Acc:416820]
97. IGDCC4 ENSGALG00000007410 5457 0.831 - - - - 0.831 - - - - - immunoglobulin superfamily DCC subclass member 4 [Source:HGNC Symbol;Acc:HGNC:13770]
98. EXO1 ENSGALG00000010748 7572 0.83 - - - - 0.830 - - - - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
99. PLAA ENSGALG00000001782 5459 0.828 - - - - 0.828 - - - - - phospholipase A2 activating protein [Source:HGNC Symbol;Acc:HGNC:9043]
100. MOB4 ENSGALG00000008128 10322 0.828 - - - - - - 0.828 - - - MOB family member 4, phocein [Source:NCBI gene;Acc:429007]

There are 143 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA