Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PRDX1

Gene Name Gene ID Reads Annotation
PRDX1 ENSGALG00000010243 151918 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]











Genes with expression patterns similar to PRDX1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PRDX1 ENSGALG00000010243 151918 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
2. RPS24 ENSGALG00000004871 173117 2.425 0.831 0.877 - - - - - - - 0.717 ribosomal protein S24 [Source:NCBI gene;Acc:423726]
3. CHPKCI CHPKCI 36217 1.67 0.751 - - - - - 0.919 - - -
4. RPS23 ENSGALG00000015617 430299 1.639 0.831 0.808 - - - - - - - - ribosomal protein S23
5. RPL23 ENSGALG00000001634 246592 1.569 0.707 0.862 - - - - - - - - Gallus gallus ribosomal protein L23 (RPL23), mRNA. [Source:RefSeq mRNA;Acc:NM_001321599]
6. RPL36 ENSGALG00000000474 237707 1.558 0.765 0.793 - - - - - - - - ribosomal protein L36 [Source:NCBI gene;Acc:373936]
7. RPL29 ENSGALG00000026978 271790 1.544 0.828 - - - - - 0.716 - - - ribosomal protein L29 [Source:NCBI gene;Acc:770249]
8. RPL14 ENSGALG00000043379 239812 1.542 - 0.785 - - - - - - - 0.757 ribosomal protein L14
9. RPL36AL ENSGALG00000004952 205590 1.499 0.706 0.793 - - - - - - - - ribosomal protein L36a like [Source:HGNC Symbol;Acc:HGNC:10346]
10. HSPE1 ENSGALG00000009070 87567 1.475 - 0.735 - - - - - - - 0.740 heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:395948]
11. RPL30 ENSGALG00000029897 58241 1.474 - 0.749 - - 0.725 - - - - - ribosomal protein L30 [Source:NCBI gene;Acc:425416]
12. YWHAZ ENSGALG00000031387 84985 1.444 0.726 - - - 0.718 - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
13. CCT5 ENSGALG00000013041 56190 0.986 - - - - - - 0.986 - - - chaperonin containing TCP1 subunit 5 [Source:NCBI gene;Acc:420930]
14. TRA2A ENSGALG00000010973 37101 0.982 - - - - - - 0.982 - - - transformer 2 alpha homolog [Source:NCBI gene;Acc:420618]
15. BUB3 ENSGALG00000009681 36055 0.974 - - - - - - 0.974 - - - BUB3, mitotic checkpoint protein [Source:NCBI gene;Acc:423949]
16. TPI1 ENSGALG00000014526 43273 0.973 - - - - - - 0.973 - - - triosephosphate isomerase 1 [Source:NCBI gene;Acc:396435]
17. ARGLU1 ENSGALG00000016855 25633 0.972 - - - - - - 0.972 - - - arginine and glutamate rich 1 [Source:NCBI gene;Acc:418765]
18. ACTR6 ENSGALG00000040976 31271 0.97 - - - - - - 0.970 - - - ARP6 actin-related protein 6 homolog [Source:NCBI gene;Acc:395348]
19. PELI1 ENSGALG00000008837 11561 0.97 - - - - - - 0.970 - - - pellino E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421279]
20. HDLBP ENSGALG00000005823 24636 0.967 - - - - - - 0.967 - - - high density lipoprotein binding protein [Source:NCBI gene;Acc:395984]
21. MRPS26 ENSGALG00000014118 27422 0.964 - - - - - - 0.964 - - - mitochondrial ribosomal protein S26 [Source:NCBI gene;Acc:426561]
22. EZH2 ENSGALG00000043399 15881 0.961 - - - - - - 0.961 - - - enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]
23. CDC5L ENSGALG00000016704 22893 0.961 - - - - - - 0.961 - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
24. WLS ENSGALG00000011238 20969 0.96 - - - - - - 0.960 - - - wntless Wnt ligand secretion mediator [Source:NCBI gene;Acc:424707]
25. ANLN 10479 0.959 - - - - - - 0.959 - - - anillin actin binding protein, transcript variant X2
26. CNBP 42704 0.958 - - - - - - 0.958 - - - CCHC-type zinc finger nucleic acid binding protein, transcript variant X7
27. MOB4 ENSGALG00000008128 10322 0.957 - - - - - - 0.957 - - - MOB family member 4, phocein [Source:NCBI gene;Acc:429007]
28. ENSGALG00000013825 ENSGALG00000013825 16473 0.957 - - - - - - 0.957 - - -
29. ENSGALG00000000360 ENSGALG00000000360 15320 0.957 - - - - - - 0.957 - - -
30. TBL1X ENSGALG00000040006 28597 0.957 - - - - - - 0.957 - - - transducin beta like 1 X-linked [Source:NCBI gene;Acc:426045]
31. MRPS15 ENSGALG00000044433 15356 0.957 - - - - - - 0.957 - - - mitochondrial ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:14504]
32. RPF1 ENSGALG00000008796 9809 0.956 - - - - - - 0.956 - - - ribosome production factor 1 homolog
33. RNF13 ENSGALG00000010411 8749 0.956 - - - - - - 0.956 - - - ring finger protein 13 [Source:NCBI gene;Acc:396303]
34. ABRACL ENSGALG00000013826 19445 0.956 - - - - - - 0.956 - - - ABRA C-terminal like [Source:NCBI gene;Acc:770205]
35. MRPS36 ENSGALG00000014789 7584 0.955 - - - - - - 0.955 - - - mitochondrial ribosomal protein S36 [Source:HGNC Symbol;Acc:HGNC:16631]
36. UBE2N ENSGALG00000030515 32059 0.954 - - - - - - 0.954 - - - ubiquitin conjugating enzyme E2 N [Source:NCBI gene;Acc:417898]
37. PPP3CB ENSGALG00000005243 8794 0.953 - - - - - - 0.953 - - - Gallus gallus protein phosphatase 3 catalytic subunit beta (PPP3CB), mRNA. [Source:RefSeq mRNA;Acc:NM_001030340]
38. MRPS34 ENSGALG00000001792 14262 0.953 - - - - - - 0.953 - - - mitochondrial ribosomal protein S34 [Source:NCBI gene;Acc:426987]
39. ZDHHC6 ENSGALG00000008870 16575 0.953 - - - - - - 0.953 - - - zinc finger DHHC-type containing 6 [Source:HGNC Symbol;Acc:HGNC:19160]
40. EXOSC7 ENSGALG00000030084 8654 0.952 - - - - - - 0.952 - - - exosome component 7 [Source:NCBI gene;Acc:420704]
41. PSMD13 ENSGALG00000043684 14720 0.951 - - - - - - 0.951 - - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
42. TRIB2 ENSGALG00000016457 17641 0.951 - - - - - - 0.951 - - - tribbles pseudokinase 2 [Source:NCBI gene;Acc:378919]
43. NOB1 ENSGALG00000000693 15442 0.95 - - - - - - 0.950 - - - NIN1 (RPN12) binding protein 1 homolog [Source:HGNC Symbol;Acc:HGNC:29540]
44. CTNNBL1 ENSGALG00000006817 6765 0.947 - - - - - - 0.947 - - - catenin beta like 1 [Source:HGNC Symbol;Acc:HGNC:15879]
45. MYBL2 ENSGALG00000003503 15875 0.947 - - - - - - 0.947 - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
46. USO1 ENSGALG00000010878 9506 0.946 - - - - - - 0.946 - - - USO1 vesicle transport factor [Source:NCBI gene;Acc:422575]
47. POLB ENSGALG00000040828 7462 0.946 - - - - - - 0.946 - - - DNA polymerase beta [Source:HGNC Symbol;Acc:HGNC:9174]
48. APITD1 APITD1 11830 0.944 - - - - - - 0.944 - - -
49. COMMD8 ENSGALG00000026279 13509 0.944 - - - - - - 0.944 - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
50. LOC424109 ENSGALG00000008738 3932 0.943 - - - - - - 0.943 - - - alpha-aspartyl dipeptidase
51. SERBP1 ENSGALG00000011229 30489 0.943 - - - - - - 0.943 - - - SERPINE1 mRNA binding protein 1 [Source:NCBI gene;Acc:424706]
52. FHL3 ENSGALG00000035187 9753 0.942 - - - - - - 0.942 - - - four and a half LIM domains 3 [Source:HGNC Symbol;Acc:HGNC:3704]
53. CCAR1 ENSGALG00000004108 13219 0.941 - - - - - - 0.941 - - - cell division cycle and apoptosis regulator 1 [Source:HGNC Symbol;Acc:HGNC:24236]
54. POLR2C ENSGALG00000001168 10703 0.941 - - - - - - 0.941 - - - RNA polymerase II subunit C [Source:NCBI gene;Acc:415635]
55. SNRPB2 28675 0.941 - - - - - - 0.941 - - - small nuclear ribonucleoprotein polypeptide B2
56. TTF1 4214 0.94 - - - - - - 0.940 - - - transcription termination factor 1
57. GALNTL4 GALNTL4 3548 0.938 - - - - - - 0.938 - - -
58. GCAT ENSGALG00000012312 7906 0.938 - - - - - - 0.938 - - - glycine C-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:4188]
59. GLT8D1 ENSGALG00000001642 4232 0.938 - - - - - - 0.938 - - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
60. RPS25 ENSGALG00000007699 156127 0.937 - - - - - - 0.937 - - - ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
61. SPINT1 ENSGALG00000008469 5735 0.937 - - - - - - 0.937 - - - serine peptidase inhibitor, Kunitz type 1, transcript variant X2
62. MMADHC ENSGALG00000012473 9026 0.937 - - - - - - 0.937 - - - methylmalonic aciduria and homocystinuria, cblD type [Source:NCBI gene;Acc:424311]
63. FGD5 ENSGALG00000008546 4031 0.937 - - - - - - 0.937 - - - FYVE, RhoGEF and PH domain containing 5 [Source:HGNC Symbol;Acc:HGNC:19117]
64. DIS3 ENSGALG00000016930 3696 0.936 - - - - - - 0.936 - - - DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease [Source:HGNC Symbol;Acc:HGNC:20604]
65. CCDC90B ENSGALG00000037072 5088 0.936 - - - - - - 0.936 - - - coiled-coil domain containing 90B [Source:HGNC Symbol;Acc:HGNC:28108]
66. C6H10ORF32 C6H10ORF32 7694 0.936 - - - - - - 0.936 - - -
67. HNRNPU ENSGALG00000010671 56560 0.935 - - - - - - 0.935 - - - heterogeneous nuclear ribonucleoprotein U [Source:HGNC Symbol;Acc:HGNC:5048]
68. gga-mir-1723 ENSGALG00000025386 6662 0.934 - - - - - - 0.934 - - - gga-mir-1723 [Source:miRBase;Acc:MI0007460]
69. EPHA3 ENSGALG00000015403 9811 0.93 - - - - - - 0.930 - - - EPH receptor A3 [Source:NCBI gene;Acc:396402]
70. TP53INP1 ENSGALG00000041353 6890 0.93 - - - - - - 0.930 - - - tumor protein p53 inducible nuclear protein 1 [Source:NCBI gene;Acc:420232]
71. ENSGALG00000006730 ENSGALG00000006730 3695 0.93 - - - - - - 0.930 - - -
72. PRKG1 ENSGALG00000003805 4654 0.928 - - - - - - 0.928 - - - protein kinase cGMP-dependent 1 [Source:HGNC Symbol;Acc:HGNC:9414]
73. MED1 ENSGALG00000001708 9556 0.928 - - - - - - 0.928 - - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
74. ZNF276 ENSGALG00000000513 2410 0.926 - - - - - - 0.926 - - - zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
75. CHL1 ENSGALG00000037856 1565 0.925 - - - - - - 0.925 - - - cell adhesion molecule L1 like [Source:HGNC Symbol;Acc:HGNC:1939]
76. CRAC1A CRAC1A 5265 0.924 - - - - - - 0.924 - - -
77. LOC425795 ENSGALG00000027696 2357 0.924 - - - - - - 0.924 - - - ectoderm-neural cortex protein 1-like, transcript variant X1
78. ATPAF2 ENSGALG00000004926 3393 0.924 - - - - - - 0.924 - - - ATP synthase mitochondrial F1 complex assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:18802]
79. SAV1 ENSGALG00000012341 3313 0.923 - - - - - - 0.923 - - - salvador family WW domain containing protein 1 [Source:HGNC Symbol;Acc:HGNC:17795]
80. SNAPIN ENSGALG00000026796 11155 0.923 - - - - - - 0.923 - - - SNAP associated protein [Source:HGNC Symbol;Acc:HGNC:17145]
81. RPUSD4 ENSGALG00000024326 3788 0.922 - - - - - - 0.922 - - - RNA pseudouridylate synthase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25898]
82. ST13 ENSGALG00000012007 25670 0.922 - - - - - - 0.922 - - - ST13, Hsp70 interacting protein [Source:NCBI gene;Acc:418003]
83. DNAJC10 ENSGALG00000008862 3114 0.922 - - - - - - 0.922 - - - DnaJ heat shock protein family (Hsp40) member C10 [Source:HGNC Symbol;Acc:HGNC:24637]
84. GDPD4 ENSGALG00000000690 824 0.922 - - - - - - 0.922 - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
85. SH3RF3 ENSGALG00000016810 2169 0.921 - - - - - - 0.921 - - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
86. LYVE1 ENSGALG00000005643 1230 0.921 - - - - - - 0.921 - - - lymphatic vessel endothelial hyaluronan receptor 1 [Source:NCBI gene;Acc:423038]
87. GSDMA ENSGALG00000013495 1650 0.921 - - - - - - 0.921 - - - gasdermin A [Source:NCBI gene;Acc:426132]
88. CSDE1 ENSGALG00000002139 1683 0.921 - - - - - - 0.921 - - - cold shock domain containing E1 [Source:NCBI gene;Acc:419886]
89. LUZP2 ENSGALG00000030151 585 0.92 - - - - - - 0.920 - - - leucine zipper protein 2 [Source:NCBI gene;Acc:423001]
90. LHFPL2 ENSGALG00000004437 500 0.919 - - - - - - 0.919 - - - LHFPL tetraspan subfamily member 2 [Source:HGNC Symbol;Acc:HGNC:6588]
91. MAPT ENSGALG00000000625 659 0.919 - - - - - - 0.919 - - - microtubule associated protein tau [Source:NCBI gene;Acc:426737]
92. DDX18 ENSGALG00000012147 12463 0.909 - - - - - - 0.909 - - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
93. STAG2 ENSGALG00000008482 13629 0.899 - - - - - - 0.899 - - - stromal antigen 2 [Source:HGNC Symbol;Acc:HGNC:11355]
94. CKAP4 ENSGALG00000012659 36398 0.895 - - - - - - 0.895 - - - cytoskeleton associated protein 4 [Source:HGNC Symbol;Acc:HGNC:16991]
95. VDAC3 ENSGALG00000041463 21595 0.894 - - - - - - 0.894 - - - voltage dependent anion channel 3, transcript variant X9
96. LOC407092 ENSGALG00000013809 10706 0.892 - - - - - - 0.892 - - - AD012Z, transcript variant X5
97. SNX17 ENSGALG00000032468 13519 0.888 - - - - - - 0.888 - - - sorting nexin 17 [Source:HGNC Symbol;Acc:HGNC:14979]
98. BRIX1 ENSGALG00000003373 27878 0.888 - - - - - - 0.888 - - - BRX1, biogenesis of ribosomes [Source:NCBI gene;Acc:427433]
99. TAF12 ENSGALG00000000991 8709 0.888 - - - - - - 0.888 - - - TATA-box binding protein associated factor 12 [Source:NCBI gene;Acc:419585]
100. ENSGALG00000028992 ENSGALG00000028992 185077 0.881 - - - - - - - - - 0.881

There are 300 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA