Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PRDM8

Gene Name Gene ID Reads Annotation
PRDM8 ENSGALG00000038372 928 PR/SET domain 8 [Source:HGNC Symbol;Acc:HGNC:13993]











Genes with expression patterns similar to PRDM8

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PRDM8 ENSGALG00000038372 928 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PR/SET domain 8 [Source:HGNC Symbol;Acc:HGNC:13993]
2. WSCD2 ENSGALG00000004849 477 3.859 - - 0.773 0.755 - 0.790 - - 0.773 0.768 WSC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:29117]
3. SHISA3 ENSGALG00000026042 1108 3.304 - - 0.804 - 0.716 0.836 - - - 0.948 shisa family member 3 [Source:HGNC Symbol;Acc:HGNC:25159]
4. NHLH1 ENSGALG00000025817 1617 3.113 - - 0.760 - - 0.794 - - 0.839 0.720 nescient helix-loop-helix 1 [Source:NCBI gene;Acc:373910]
5. ENSGALG00000027002 ENSGALG00000027002 7570 2.533 - - 0.870 - - - - - 0.820 0.843
6. TAGLN3 ENSGALG00000015379 7865 2.347 - - 0.850 - - - - - 0.772 0.725 transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]
7. PAX-6 PAX-6 2650 2.279 - - 0.773 0.727 - - - - - 0.779
8. CRMP1B CRMP1B 18633 2.222 - - 0.773 - - - - - 0.714 0.735
9. GPM6A ENSGALG00000043480 2133 2.174 - - 0.710 - - 0.732 - - - 0.732 glycoprotein M6A [Source:NCBI gene;Acc:422569]
10. RGMA ENSGALG00000039173 12874 1.716 - - - - - 0.866 - - - 0.850 repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]
11. EN1 ENSGALG00000042389 3051 1.65 - - - - - 0.793 - - - 0.857 engrailed homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3342]
12. FAM110A ENSGALG00000046425 5558 1.648 - - - - - - - - 0.771 0.877 family with sequence similarity 110 member A [Source:HGNC Symbol;Acc:HGNC:16188]
13. NTN3 ENSGALG00000029072 1368 1.583 - - 0.756 - - 0.827 - - - - netrin 1 [Source:NCBI gene;Acc:396387]
14. TMSB10 TMSB10 518 1.553 - - 0.809 - - - - - - 0.744
15. NKX-6.2 NKX-6.2 1370 1.549 - - 0.751 - - 0.798 - - - -
16. CSPG5 ENSGALG00000032184 991 1.507 - - 0.710 - - - - - - 0.797 chondroitin sulfate proteoglycan 5 [Source:NCBI gene;Acc:395466]
17. NRN1 ENSGALG00000043041 534 1.486 - - - - - - - 0.760 0.726 - neuritin 1 [Source:NCBI gene;Acc:420873]
18. VSX1 ENSGALG00000037576 1517 1.459 - - 0.714 - - - - - - 0.745 visual system homeobox 1 [Source:NCBI gene;Acc:395537]
19. ADAM33 ENSGALG00000030602 7 1 - - - - - - - 1.000 - - ADAM metallopeptidase domain 33 [Source:NCBI gene;Acc:422948]
20. KCNJ16 ENSGALG00000004373 6 1 - - - - - - - 1.000 - - potassium voltage-gated channel subfamily J member 16 [Source:HGNC Symbol;Acc:HGNC:6262]
21. gga-mir-30d ENSGALG00000018290 9 1 - - - - - - - 1.000 - - gga-mir-30d [Source:miRBase;Acc:MI0001198]
22. STAM2 ENSGALG00000012513 9 1 - - - - - - - 1.000 - - signal transducing adaptor molecule 2 [Source:NCBI gene;Acc:424317]
23. RALGPS1_1 ENSGALG00000000906 7 1 - - - - - - - 1.000 - - Ral GEF with PH domain and SH3 binding motif 1 [Source:HGNC Symbol;Acc:HGNC:16851]
24. ICMT ENSGALG00000024053 10 1 - - - - - - - 1.000 - - isoprenylcysteine carboxyl methyltransferase [Source:NCBI gene;Acc:419373]
25. C14orf159 C14orf159 7 1 - - - - - - - 1.000 - -
26. NFAM1 ENSGALG00000011872 1 1 - - - - - - - 1.000 - - NFAT activating protein with ITAM motif 1, transcript variant X1
27. DBX1 ENSGALG00000003965 1432 1 - - - - - - - 1.000 - - developing brain homeobox 1 [Source:NCBI gene;Acc:422976]
28. HSD3B7 ENSGALG00000045366 12 1 - - - - - - - 1.000 - - hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7, transcript variant X2
29. PIT-1 PIT-1 8 1 - - - - - - - 1.000 - -
30. IL4 ENSGALG00000006827 2 1 - - - - - - - 1.000 - - interleukin 4 [Source:NCBI gene;Acc:416330]
31. PLCL1 ENSGALG00000008113 23 1 - - - - - - - 1.000 - - phospholipase C like 1 (inactive) [Source:HGNC Symbol;Acc:HGNC:9063]
32. SUPT7L ENSGALG00000010048 8 0.998 - - - - - - - 0.998 - - SPT7 like, STAGA complex gamma subunit [Source:HGNC Symbol;Acc:HGNC:30632]
33. CCDC112 ENSGALG00000045092 38 0.998 - - - - - - - 0.998 - - coiled-coil domain containing 112 [Source:HGNC Symbol;Acc:HGNC:28599]
34. BDH1B ENSGALG00000006976 9 0.998 - - - - - - - 0.998 - - 3-hydroxybutyrate dehydrogenase, type 1 B, transcript variant X1
35. INSRR ENSGALG00000013253 54 0.998 - - - - - - - 0.998 - - insulin receptor related receptor [Source:HGNC Symbol;Acc:HGNC:6093]
36. PCCA ENSGALG00000016872 103 0.998 - - - - - - - 0.998 - - propionyl-CoA carboxylase subunit alpha [Source:HGNC Symbol;Acc:HGNC:8653]
37. SYNJ2 ENSGALG00000013727 17 0.991 - - - - - - - 0.991 - - synaptojanin 2 [Source:HGNC Symbol;Acc:HGNC:11504]
38. FADD ENSGALG00000007625 142 0.991 - - - - - - - 0.991 - - Fas associated via death domain [Source:HGNC Symbol;Acc:HGNC:3573]
39. FAM19A1 32 0.991 - - - - - - - 0.991 - - family with sequence similarity 19 member A1, C-C motif chemokine like, transcript variant X5
40. RASGRP3 ENSGALG00000010435 19 0.962 - - - - - - - 0.962 - - RAS guanyl releasing protein 3 [Source:NCBI gene;Acc:421460]
41. SCL SCL 69 0.961 - - - - - - - 0.961 - -
42. GPR97 GPR97 16 0.952 - - - - - - - 0.952 - -
43. RAC3 ENSGALG00000040606 355 0.95 - - - - - - - 0.950 - - Rac family small GTPase 3 [Source:NCBI gene;Acc:395870]
44. AFTPH ENSGALG00000008828 21 0.949 - - - - - - - 0.949 - - aftiphilin [Source:HGNC Symbol;Acc:HGNC:25951]
45. HBE1 ENSGALG00000028273 189 0.943 - - - - - - - 0.943 - - hemoglobin subunit epsilon 1 [Source:NCBI gene;Acc:428114]
46. IL-12B IL-12B 14 0.943 - - - - - - - 0.943 - -
47. EHD4 ENSGALG00000008950 22 0.943 - - - - - - - 0.943 - - EH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:3245]
48. ZEB2 ENSGALG00000040465 315 0.943 - - - - - - - 0.943 - - Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
49. GALK1 ENSGALG00000002311 13 0.941 - - - - - - - 0.941 - - galactokinase 1 [Source:HGNC Symbol;Acc:HGNC:4118]
50. KEL ENSGALG00000014736 18 0.936 - - - - - - - 0.936 - - Kell blood group, metallo-endopeptidase, transcript variant X4
51. C1S ENSGALG00000014603 80 0.931 - - - - - - - 0.931 - - complement C1s [Source:NCBI gene;Acc:418294]
52. CACNG2 ENSGALG00000031977 196 0.926 - - - - - - - 0.926 - - calcium voltage-gated channel auxiliary subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:1406]
53. EPYC ENSGALG00000011269 17 0.92 - - - - - - - 0.920 - - epiphycan [Source:NCBI gene;Acc:417890]
54. ARMC7 ENSGALG00000007961 217 0.92 - - - - - - - 0.920 - - armadillo repeat containing 7 [Source:NCBI gene;Acc:422118]
55. CPN2 ENSGALG00000045776 18 0.913 - - - - - - - 0.913 - - carboxypeptidase N subunit 2
56. KL ENSGALG00000017068 21 0.912 - - - - - - - 0.912 - - klotho [Source:HGNC Symbol;Acc:HGNC:6344]
57. CITED2 ENSGALG00000013818 4 0.91 - - - - - - - 0.910 - - Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 [Source:NCBI gene;Acc:395399]
58. FAM46D 22 0.909 - - - - - - - 0.909 - - family with sequence similarity 46 member D
59. RHOBTB3 ENSGALG00000014675 58 0.897 - - - - - - - 0.897 - - Rho related BTB domain containing 3 [Source:HGNC Symbol;Acc:HGNC:18757]
60. OSGIN2 ENSGALG00000042840 83 0.89 - - - - - - - 0.890 - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
61. HES6 ENSGALG00000028415 4830 0.889 - - - - - - - 0.889 - - hes family bHLH transcription factor 6
62. MYO1C ENSGALG00000002709 57 0.873 - - - - - - - 0.873 - - myosin IC [Source:NCBI gene;Acc:417555]
63. CENPM ENSGALG00000011914 18 0.867 - - - - - - - 0.867 - - centromere protein M [Source:NCBI gene;Acc:417982]
64. UVRAG ENSGALG00000000845 40 0.867 - - - - - - - 0.867 - - UV radiation resistance associated [Source:NCBI gene;Acc:419091]
65. ABI2 ENSGALG00000008714 27 0.865 - - - - - - - 0.865 - - abl interactor 2 [Source:HGNC Symbol;Acc:HGNC:24011]
66. MAP3K3 ENSGALG00000000525 115 0.863 - - - - - - - 0.863 - - mitogen-activated protein kinase kinase kinase 3 [Source:HGNC Symbol;Acc:HGNC:6855]
67. TCF15 ENSGALG00000026276 3646 0.861 - - - - - 0.861 - - - - transcription factor 15 [Source:NCBI gene;Acc:395788]
68. MYH1D ENSGALG00000027323 365 0.861 - - - - 0.861 - - - - - Gallus gallus myosin, heavy chain 1D, skeletal muscle (MYH1D), mRNA. [Source:RefSeq mRNA;Acc:NM_001319304]
69. CEP95 ENSGALG00000003540 475 0.86 - - - - - - - 0.860 - - centrosomal protein 95 [Source:HGNC Symbol;Acc:HGNC:25141]
70. FGD4 ENSGALG00000012932 50 0.847 - - - - - - - 0.847 - - FYVE, RhoGEF and PH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:19125]
71. ITGB2 ENSGALG00000007511 46 0.847 - - - - - - - 0.847 - - integrin subunit beta 2 [Source:NCBI gene;Acc:396181]
72. HPCAL1 ENSGALG00000016443 6633 0.841 - - - - - 0.841 - - - - hippocalcin like 1 [Source:NCBI gene;Acc:396161]
73. ENSGALG00000012463 ENSGALG00000012463 242 0.836 - - - - - - - 0.836 - -
74. ZNF488 ENSGALG00000005975 82 0.836 - - - - - - - - - 0.836 zinc finger protein 488, transcript variant X2
75. ENSGALG00000019837 ENSGALG00000019837 211 0.831 - - - - - - - 0.831 - -
76. MUC5B MUC5B 62 0.83 - - - - - - - 0.830 - -
77. CLVS1 ENSGALG00000043172 56 0.828 - - 0.828 - - - - - - - clavesin 1
78. ELAVL4 ENSGALG00000010533 4978 0.826 - - - - - 0.826 - - - - ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
79. C1QTNF3 ENSGALG00000027887 8646 0.823 - - - - - 0.823 - - - - C1q and tumor necrosis factor related protein 3, transcript variant X1
80. gga-mir-1458 ENSGALG00000030959 41 0.818 - - - - - 0.818 - - - - gga-mir-1458 [Source:miRBase;Acc:MI0007063]
81. PPP1R17 ENSGALG00000036390 2418 0.816 - - - - - - - - 0.816 - protein phosphatase 1 regulatory subunit 17 [Source:HGNC Symbol;Acc:HGNC:16973]
82. LRRN2 ENSGALG00000000639 73 0.816 - - 0.816 - - - - - - - leucine rich repeat neuronal 2 [Source:HGNC Symbol;Acc:HGNC:16914]
83. PRADC1 ENSGALG00000016089 997 0.815 - - - - - - - 0.815 - - protease associated domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16047]
84. ENSGALG00000012382 ENSGALG00000012382 10 0.812 - - - - - - - 0.812 - -
85. KCNMB4 ENSGALG00000010044 377 0.806 - - - - - 0.806 - - - - potassium calcium-activated channel subfamily M regulatory beta subunit 4 [Source:NCBI gene;Acc:417852]
86. GALE ENSGALG00000004047 150 0.801 - - - - - - - 0.801 - - UDP-galactose-4-epimerase [Source:HGNC Symbol;Acc:HGNC:4116]
87. SLC35F1 ENSGALG00000029011 14728 0.796 - - - - - - - - - 0.796 solute carrier family 35 member F1 [Source:HGNC Symbol;Acc:HGNC:21483]
88. CD300A CD300A 173 0.796 - - - - - - - 0.796 - -
89. ENSGALG00000020497 ENSGALG00000020497 446 0.794 - - - - - - - 0.794 - -
90. PHACTR2 ENSGALG00000013768 44 0.793 - - - - - - - 0.793 - - phosphatase and actin regulator 2 [Source:HGNC Symbol;Acc:HGNC:20956]
91. ERBB2 ENSGALG00000031529 313 0.792 - - - - - - - 0.792 - - erb-b2 receptor tyrosine kinase 2 [Source:NCBI gene;Acc:426130]
92. AGL ENSGALG00000005407 93 0.791 - - - - - - - 0.791 - - amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase [Source:HGNC Symbol;Acc:HGNC:321]
93. LOC419390 ENSGALG00000001136 607 0.791 - - 0.791 - - - - - - - hairy and enhancer of split 5-like, transcript variant X1
94. ATP13A2 ENSGALG00000003774 271 0.791 - - - - - - - 0.791 - - ATPase 13A2 [Source:NCBI gene;Acc:419466]
95. ENPP2 ENSGALG00000032746 6086 0.788 - - - - - - - - - 0.788 ectonucleotide pyrophosphatase/phosphodiesterase 2 [Source:NCBI gene;Acc:420361]
96. TMEM108 ENSGALG00000036412 2903 0.786 - - - - - 0.786 - - - - transmembrane protein 108 [Source:HGNC Symbol;Acc:HGNC:28451]
97. MAP6 ENSGALG00000007441 585 0.783 - - - - - - - - - 0.783 microtubule associated protein 6 [Source:NCBI gene;Acc:395753]
98. TAS1R1 ENSGALG00000046030 8 0.782 - - - - 0.782 - - - - - taste 1 receptor member 1 [Source:HGNC Symbol;Acc:HGNC:14448]
99. SV2B ENSGALG00000030250 164 0.781 - - - - - 0.781 - - - - synaptic vesicle glycoprotein 2B [Source:HGNC Symbol;Acc:HGNC:16874]
100. EPB42 ENSGALG00000021230 20 0.781 - - - - - - - 0.781 - - Gallus gallus erythrocyte membrane protein band 4.2 (EPB42), mRNA. [Source:RefSeq mRNA;Acc:NM_001321559]

There are 77 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA