Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for PRDM4

Gene Name Gene ID Reads Annotation
PRDM4 ENSGALG00000012619 876 PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]











Genes with expression patterns similar to PRDM4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PRDM4 ENSGALG00000012619 876 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
2. RPL22 ENSGALG00000000719 74238 2.537 - - - 0.758 0.937 - - - - 0.842 ribosomal protein L22 [Source:NCBI gene;Acc:373937]
3. ATG16L1 ENSGALG00000001619 3562 2.391 - - - 0.811 0.757 - - - - 0.823 autophagy related 16 like 1 [Source:HGNC Symbol;Acc:HGNC:21498]
4. LOC426385 ENSGALG00000026301 2703 1.916 - - - - 0.987 - - - - 0.929 serine/threonine kinase 35-like, transcript variant X2
5. YARS ENSGALG00000003563 11093 1.897 - - - 0.900 0.997 - - - - - tyrosyl-tRNA synthetase [Source:NCBI gene;Acc:419666]
6. KIF11 ENSGALG00000030597 5528 1.885 - - - - 0.991 - - - - 0.894 kinesin family member 11 [Source:NCBI gene;Acc:423809]
7. RHOT1 ENSGALG00000003397 5149 1.865 - - - - 0.979 - - - - 0.886 ras homolog family member T1 [Source:NCBI gene;Acc:417410]
8. ASAP2 ENSGALG00000016419 1393 1.862 - - - - 0.995 - - - - 0.867 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
9. NARS ENSGALG00000040506 9506 1.861 - - - - 0.937 - - - - 0.924 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
10. PHTF1 ENSGALG00000001845 3276 1.856 - - - 0.862 0.994 - - - - - putative homeodomain transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:8939]
11. MED8 ENSGALG00000009993 3095 1.846 - - - 0.848 0.998 - - - - - mediator complex subunit 8 [Source:NCBI gene;Acc:424565]
12. ITGA9 ENSGALG00000029378 415 1.82 - - - 0.929 - - - - - 0.891 integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
13. PITHD1 ENSGALG00000003986 11470 1.814 - - - 0.819 0.995 - - - - - PITH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25022]
14. TM9SF3 ENSGALG00000005534 15290 1.799 - - - 0.849 0.950 - - - - - transmembrane 9 superfamily member 3
15. CHMP5 ENSGALG00000013160 13347 1.761 - - - - 0.927 - - - - 0.834 charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
16. INTS10 ENSGALG00000010130 6320 1.741 - - - 0.850 - - - - - 0.891 integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
17. PGD ENSGALG00000002797 15115 1.735 - - - 0.865 - - - - - 0.870 phosphogluconate dehydrogenase [Source:NCBI gene;Acc:419450]
18. PPFIA1 ENSGALG00000035774 5258 1.731 - - - 0.887 - - - - - 0.844 PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
19. SVIL ENSGALG00000007331 12032 1.728 - - - - 0.842 - - - - 0.886 supervillin [Source:HGNC Symbol;Acc:HGNC:11480]
20. SSR2 ENSGALG00000000764 32190 1.719 - - - 0.858 - - - - - 0.861 signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
21. PRKCI ENSGALG00000009364 11574 1.707 - - - 0.753 0.954 - - - - - protein kinase C iota [Source:NCBI gene;Acc:424991]
22. BTG1L ENSGALG00000004676 2293 1.702 - - - 0.931 - - - - - 0.771 protein BTG1-like
23. TIMMDC1 ENSGALG00000024480 9337 1.7 - - - 0.713 0.987 - - - - - translocase of inner mitochondrial membrane domain containing 1 [Source:NCBI gene;Acc:418453]
24. FTD FTD 3041 1.69 - - - 0.856 - - - - - 0.834
25. ASB9 ENSGALG00000016563 2780 1.683 - - - 0.849 - - - - - 0.834 ankyrin repeat and SOCS box containing 9 [Source:NCBI gene;Acc:418625]
26. CNTRL ENSGALG00000001513 1773 1.668 - - - 0.793 - - - - - 0.875 centriolin [Source:NCBI gene;Acc:417121]
27. VPS13B 2293 1.657 - - - 0.929 - - - - 0.728 - vacuolar protein sorting 13 homolog B
28. KMT2C 6306 1.654 - - - - - - - - 0.786 0.868 lysine methyltransferase 2C, transcript variant X14
29. NCOA3 ENSGALG00000004570 243 1.65 - - - 0.931 - - - - 0.719 - nuclear receptor coactivator 3 [Source:HGNC Symbol;Acc:HGNC:7670]
30. ENSGALG00000009044 ENSGALG00000009044 14492 1.642 - - - 0.736 - - - - - 0.906
31. LRRN4 ENSGALG00000008815 481 1.636 - - 0.757 - - - - - - 0.879 leucine rich repeat neuronal 4 [Source:HGNC Symbol;Acc:HGNC:16208]
32. FZD6 ENSGALG00000030626 3336 1.629 - - - - - - - - 0.829 0.800 frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
33. CLSPN ENSGALG00000002346 2590 1.627 - - - 0.718 - - - - - 0.909 claspin [Source:NCBI gene;Acc:428223]
34. GTF2F2 ENSGALG00000016974 7524 1.601 - - - 0.860 - - - - - 0.741 general transcription factor IIF subunit 2 [Source:HGNC Symbol;Acc:HGNC:4653]
35. UMPS ENSGALG00000011770 11331 1.598 - - - 0.708 0.890 - - - - - uridine monophosphate synthetase [Source:NCBI gene;Acc:424256]
36. WDSUB1 ENSGALG00000012574 2038 1.591 - - - 0.705 - - - - - 0.886 WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
37. ODZ3 ODZ3 2213 1.578 - - - 0.779 - - - - - 0.799
38. CWC22 ENSGALG00000009001 5984 1.576 - - - - - - - - 0.712 0.864 CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]
39. KAT6A ENSGALG00000003641 2631 1.576 - - - - - - - - 0.719 0.857 lysine acetyltransferase 6A [Source:HGNC Symbol;Acc:HGNC:13013]
40. RAB20 ENSGALG00000016844 3250 1.565 - - - 0.800 - - - - - 0.765 RAB20, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18260]
41. SMC5 ENSGALG00000015118 1799 1.564 - - - 0.864 - - - - - 0.700 structural maintenance of chromosomes 5 [Source:NCBI gene;Acc:431608]
42. HS2ST1 ENSGALG00000028423 4153 1.561 - - - 0.761 - - - - - 0.800 heparan sulfate 2-O-sulfotransferase 1 [Source:NCBI gene;Acc:395140]
43. SYNCRIP ENSGALG00000015830 30555 1.549 - - - - 0.731 - - - - 0.818 synaptotagmin binding cytoplasmic RNA interacting protein [Source:NCBI gene;Acc:421831]
44. HP1BP3 ENSGALG00000010079 33723 1.545 - - - - 0.811 - - - 0.734 - heterochromatin protein 1 binding protein 3 [Source:NCBI gene;Acc:425543]
45. ENOX2 ENSGALG00000004079 4055 1.535 - - - 0.748 - - - - 0.787 - ecto-NOX disulfide-thiol exchanger 2 [Source:NCBI gene;Acc:422142]
46. OSBPL11 ENSGALG00000012059 2523 1.525 - - - 0.782 - - - - 0.743 - oxysterol binding protein like 11 [Source:HGNC Symbol;Acc:HGNC:16397]
47. IBTK ENSGALG00000015864 3154 1.506 - - - 0.755 - - - - 0.751 - inhibitor of Bruton tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:17853]
48. SNW1 ENSGALG00000010501 17767 1.483 - - - 0.732 - - - - - 0.751 SNW domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16696]
49. MED7 ENSGALG00000003870 4244 1.457 - - - 0.737 - - - - 0.720 - mediator complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:2378]
50. NUBP1 ENSGALG00000007241 3791 1.455 - - - 0.716 - - - - - 0.739 nucleotide binding protein 1 [Source:NCBI gene;Acc:416634]
51. RAMP3 ENSGALG00000037246 1187 0.999 - - - - 0.999 - - - - - receptor activity modifying protein 3 [Source:NCBI gene;Acc:420786]
52. SMG7 ENSGALG00000004667 707 0.999 - - - - 0.999 - - - - - SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
53. PREP2 PREP2 238 0.999 - - - - 0.999 - - - - -
54. BRF1 ENSGALG00000011705 3406 0.998 - - - - 0.998 - - - - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
55. ANKRD9 ENSGALG00000011376 525 0.998 - - - - 0.998 - - - - - ankyrin repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20096]
56. PTK2B ENSGALG00000016564 406 0.998 - - - - 0.998 - - - - - protein tyrosine kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:9612]
57. SDCBP ENSGALG00000015436 1228 0.998 - - - - 0.998 - - - - - syndecan binding protein [Source:NCBI gene;Acc:421136]
58. GTF2H1 ENSGALG00000042340 1553 0.997 - - - - 0.997 - - - - - general transcription factor IIH subunit 1 [Source:NCBI gene;Acc:423081]
59. RBM6 ENSGALG00000035578 1690 0.997 - - - - 0.997 - - - - - RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]
60. SYNE1 ENSGALG00000013505 2324 0.996 - - - - 0.996 - - - - - spectrin repeat containing, nuclear envelope 1, transcript variant X3
61. LZIC ENSGALG00000002616 9052 0.996 - - - - 0.996 - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
62. SAP30 ENSGALG00000036252 2032 0.996 - - - - 0.996 - - - - - Sin3A associated protein 30 [Source:HGNC Symbol;Acc:HGNC:10532]
63. BAHD1 ENSGALG00000033675 1779 0.995 - - - - 0.995 - - - - - bromo adjacent homology domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29153]
64. NDUFV1 ENSGALG00000042809 6222 0.995 - - - - 0.995 - - - - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:NCBI gene;Acc:430210]
65. TMF1 ENSGALG00000013408 3344 0.994 - - - - 0.994 - - - - - TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]
66. ENSGALG00000006569 ENSGALG00000006569 2169 0.994 - - - - 0.994 - - - - -
67. ETS1 ENSGALG00000001143 7284 0.994 - - - - 0.994 - - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:NCBI gene;Acc:396235]
68. MRPL16 ENSGALG00000029419 8033 0.993 - - - - 0.993 - - - - - mitochondrial ribosomal protein L16 [Source:HGNC Symbol;Acc:HGNC:14476]
69. HSF2 ENSGALG00000038420 5259 0.992 - - - - 0.992 - - - - - heat shock transcription factor 2 [Source:NCBI gene;Acc:421724]
70. SNX14 ENSGALG00000015831 2554 0.992 - - - - 0.992 - - - - - sorting nexin 14 [Source:NCBI gene;Acc:421832]
71. RBM34 ENSGALG00000029915 5618 0.992 - - - - 0.992 - - - - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
72. RAD54B ENSGALG00000043597 1699 0.992 - - - - 0.992 - - - - - RAD54 homolog B [Source:NCBI gene;Acc:395449]
73. IARS2 ENSGALG00000009566 4599 0.991 - - - - 0.991 - - - - - isoleucyl-tRNA synthetase 2, mitochondrial [Source:NCBI gene;Acc:421346]
74. EDNRA ENSGALG00000010013 2472 0.991 - - - - 0.991 - - - - - endothelin receptor type A [Source:NCBI gene;Acc:373908]
75. DLL1 ENSGALG00000011182 1613 0.991 - - - - 0.991 - - - - - delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
76. C9orf85 ENSGALG00000026001 4110 0.991 - - - - 0.991 - - - - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
77. FNDC5 ENSGALG00000003567 3328 0.991 - - - - 0.991 - - - - - Gallus gallus fibronectin type III domain containing 5 (FNDC5), mRNA. [Source:RefSeq mRNA;Acc:NM_001318986]
78. RALGDS ENSGALG00000003412 4478 0.99 - - - - 0.990 - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
79. STARD3NL ENSGALG00000033038 4851 0.99 - - - - 0.990 - - - - - STARD3 N-terminal like [Source:HGNC Symbol;Acc:HGNC:19169]
80. COQ5 ENSGALG00000007185 5614 0.989 - - - - 0.989 - - - - - coenzyme Q5, methyltransferase [Source:NCBI gene;Acc:416975]
81. DGKZ ENSGALG00000008380 5389 0.989 - - - - 0.989 - - - - - diacylglycerol kinase zeta [Source:NCBI gene;Acc:423197]
82. WDR92 ENSGALG00000008760 3934 0.988 - - - - 0.988 - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
83. CDKN1B ENSGALG00000022980 4606 0.988 - - - - 0.988 - - - - - cyclin dependent kinase inhibitor 1B [Source:NCBI gene;Acc:374106]
84. MED21 ENSGALG00000027435 5766 0.987 - - - - 0.987 - - - - - mediator complex subunit 21 [Source:HGNC Symbol;Acc:HGNC:11473]
85. TSPO2 ENSGALG00000003212 5141 0.987 - - - - 0.987 - - - - - translocator protein 2 [Source:HGNC Symbol;Acc:HGNC:21256]
86. MEF2BNB MEF2BNB 5578 0.987 - - - - 0.987 - - - - -
87. SFXN5 ENSGALG00000016094 2678 0.986 - - - - 0.986 - - - - - sideroflexin 5 [Source:HGNC Symbol;Acc:HGNC:16073]
88. LMAN2 ENSGALG00000033232 11740 0.985 - - - - 0.985 - - - - - lectin, mannose binding 2 [Source:HGNC Symbol;Acc:HGNC:16986]
89. ENSGALG00000027854 ENSGALG00000027854 5007 0.985 - - - - 0.985 - - - - -
90. PBRM1 ENSGALG00000037455 6450 0.983 - - - - 0.983 - - - - - polybromo 1 [Source:NCBI gene;Acc:396074]
91. UTP6 ENSGALG00000003260 4909 0.983 - - - - 0.983 - - - - - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
92. MARC1 ENSGALG00000009453 5675 0.983 - - - - 0.983 - - - - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
93. CP ENSGALG00000030773 119 0.982 - - - - - - - - - 0.982 ceruloplasmin [Source:HGNC Symbol;Acc:HGNC:2295]
94. PSMG3 ENSGALG00000004203 11240 0.982 - - - - 0.982 - - - - - proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
95. CDH3 5050 0.981 - - - - 0.981 - - - - - cadherin 3
96. FUNDC2 ENSGALG00000029585 9334 0.981 - - - - 0.981 - - - - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
97. WNK2 ENSGALG00000038850 4712 0.979 - - - - 0.979 - - - - - WNK lysine deficient protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:14542]
98. MYBL2 ENSGALG00000003503 15875 0.979 - - - - 0.979 - - - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
99. UPF3B ENSGALG00000008618 12350 0.978 - - - - 0.978 - - - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
100. SH3BGR ENSGALG00000016127 2561 0.978 - - - - 0.978 - - - - - SH3 domain binding glutamate rich protein

There are 981 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA