Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PRDM11

Gene Name Gene ID Reads Annotation
PRDM11 ENSGALG00000008053 459 PR/SET domain 11, transcript variant X3











Genes with expression patterns similar to PRDM11

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PRDM11 ENSGALG00000008053 459 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PR/SET domain 11, transcript variant X3
2. ENSGALG00000029149 ENSGALG00000029149 7 0.886 - - - - - 0.886 - - - -
3. AGAP1 ENSGALG00000004045 47 0.852 - - - - - 0.852 - - - - ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 [Source:HGNC Symbol;Acc:HGNC:16922]
4. FRRS1 ENSGALG00000005418 332 0.83 - - - - - 0.830 - - - - ferric chelate reductase 1 [Source:HGNC Symbol;Acc:HGNC:27622]
5. ZNF6 ZNF6 138 0.821 - - 0.821 - - - - - - -
6. ELF2 ENSGALG00000009774 83 0.821 - - - - - - - - 0.821 - E74 like ETS transcription factor 2, transcript variant X5
7. FNBP1 ENSGALG00000004088 1400 0.821 - - - - - 0.821 - - - - formin binding protein 1 [Source:HGNC Symbol;Acc:HGNC:17069]
8. UBE2L6 ENSGALG00000046098 393 0.812 - - - - - - - - 0.812 - ubiquitin-conjugating enzyme E2L 6, transcript variant X3
9. LRRC8C ENSGALG00000006170 43 0.807 - - - - - - 0.807 - - - leucine rich repeat containing 8 VRAC subunit C [Source:HGNC Symbol;Acc:HGNC:25075]
10. AKAP11 ENSGALG00000022739 82 0.804 - - - - - - - - 0.804 - A-kinase anchoring protein 11 [Source:HGNC Symbol;Acc:HGNC:369]
11. CLDN1 ENSGALG00000026862 28 0.801 - - - - - 0.801 - - - - claudin 1 [Source:NCBI gene;Acc:424910]
12. FOXP1 127 0.776 - - - - - - - - 0.776 - forkhead box P1, transcript variant X14
13. AGA ENSGALG00000010716 2299 0.77 - - - - - - - 0.770 - - aspartylglucosaminidase [Source:NCBI gene;Acc:422558]
14. TIMM21 ENSGALG00000013709 3215 0.767 - - - - - - - - 0.767 - translocase of inner mitochondrial membrane 21 [Source:HGNC Symbol;Acc:HGNC:25010]
15. CYP2R1 ENSGALG00000006050 1521 0.766 - - - - - - - 0.766 - - cytochrome P450 family 2 subfamily R member 1 [Source:HGNC Symbol;Acc:HGNC:20580]
16. GALNT11 ENSGALG00000006233 210 0.764 - - - - - - - - 0.764 - polypeptide N-acetylgalactosaminyltransferase 11 [Source:HGNC Symbol;Acc:HGNC:19875]
17. gga-mir-1306 ENSGALG00000025271 1231 0.762 - - - - - - 0.762 - - - gga-mir-1306 [Source:miRBase;Acc:MI0007057]
18. EPB41L4B ENSGALG00000029935 125 0.757 - - - - - 0.757 - - - - erythrocyte membrane protein band 4.1 like 4B [Source:HGNC Symbol;Acc:HGNC:19818]
19. KIAA0408 ENSGALG00000030211 934 0.756 - - - - - 0.756 - - - - KIAA0408 [Source:HGNC Symbol;Acc:HGNC:21636]
20. STIL ENSGALG00000010478 1398 0.752 - - - - - - - - 0.752 - STIL, centriolar assembly protein [Source:HGNC Symbol;Acc:HGNC:10879]
21. WAPAL WAPAL 625 0.751 - - - - - - - - 0.751 -
22. FAM96A ENSGALG00000026448 41 0.751 - - - - - 0.751 - - - - family with sequence similarity 96 member A [Source:NCBI gene;Acc:415571]
23. CIP1 CIP1 44 0.751 - - - - - 0.751 - - - -
24. PRPF19 ENSGALG00000040048 168 0.749 - - - - - 0.749 - - - - pre-mRNA processing factor 19 [Source:NCBI gene;Acc:430767]
25. NPHP1 ENSGALG00000008195 1465 0.747 - - - - - - - 0.747 - - nephrocystin 1 [Source:NCBI gene;Acc:421223]
26. ENSGALG00000027132 ENSGALG00000027132 1704 0.743 - - 0.743 - - - - - - -
27. TRADD ENSGALG00000003195 1103 0.738 - - - - - - - 0.738 - - TNFRSF1A associated via death domain [Source:HGNC Symbol;Acc:HGNC:12030]
28. GNS ENSGALG00000009856 3045 0.735 - - - - - - - 0.735 - - glucosamine (N-acetyl)-6-sulfatase [Source:NCBI gene;Acc:417829]
29. GCH1 ENSGALG00000012200 445 0.734 - - - - - - - - 0.734 - GTP cyclohydrolase 1 [Source:NCBI gene;Acc:396146]
30. CLIC3 ENSGALG00000038789 233 0.733 - - - - - 0.733 - - - - chloride intracellular channel 3 [Source:HGNC Symbol;Acc:HGNC:2064]
31. ASB3 ENSGALG00000008176 5422 0.731 - - - - - - - - 0.731 - ankyrin repeat and SOCS box containing 3 [Source:NCBI gene;Acc:428545]
32. GPRC5C ENSGALG00000021362 3712 0.73 - - - - - 0.730 - - - - G protein-coupled receptor class C group 5 member C [Source:HGNC Symbol;Acc:HGNC:13309]
33. PTPRJ ENSGALG00000006382 891 0.727 - - - - - - - - 0.727 - protein tyrosine phosphatase, receptor type J [Source:NCBI gene;Acc:395330]
34. C3H20ORF72 C3H20ORF72 442 0.727 - - - - - 0.727 - - - -
35. H2AFY2 ENSGALG00000004794 576 0.721 - - - - - - - - 0.721 - H2A histone family, member Y2 [Source:NCBI gene;Acc:423721]
36. AFF3 1016 0.72 - - - - - - - - 0.720 - AF4/FMR2 family member 3, transcript variant X6
37. ATF6 ENSGALG00000032278 71 0.72 - - - - - - - - 0.720 - activating transcription factor 6 [Source:HGNC Symbol;Acc:HGNC:791]
38. CTSB ENSGALG00000030016 177 0.719 - - - - - - - - 0.719 - cathepsin B [Source:NCBI gene;Acc:396329]
39. FBXL18 ENSGALG00000004611 97 0.718 - - - - - - - - 0.718 - F-box and leucine rich repeat protein 18 [Source:NCBI gene;Acc:416484]
40. NEURL2 ENSGALG00000006854 22 0.716 - - - - - 0.716 - - - - neuralized E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:16156]
41. DACH2 ENSGALG00000006886 426 0.716 - - - - - - - - 0.716 - dachshund family transcription factor 2 [Source:NCBI gene;Acc:395576]
42. SH2D4A ENSGALG00000010122 206 0.715 - - - - - 0.715 - - - - SH2 domain containing 4A [Source:HGNC Symbol;Acc:HGNC:26102]
43. ENSGALG00000012665 ENSGALG00000012665 1381 0.715 - - - - - - - - 0.715 -
44. ODZ2 ODZ2 1380 0.714 - - - - - - - 0.714 - -
45. MAFF ENSGALG00000012277 3392 0.713 - - - - - - - 0.713 - - MAF bZIP transcription factor F [Source:NCBI gene;Acc:395519]
46. EHMT1 ENSGALG00000033678 5720 0.711 - - - - - 0.711 - - - - euchromatic histone lysine methyltransferase 1 [Source:NCBI gene;Acc:417250]
47. PSMA4 ENSGALG00000003046 4870 0.71 - - - - - - - 0.710 - - proteasome subunit alpha 4 [Source:NCBI gene;Acc:415357]
48. ALKBH4 ENSGALG00000001844 364 0.709 - - - - - 0.709 - - - - alkB homolog 4, lysine demethylase [Source:HGNC Symbol;Acc:HGNC:21900]
49. TTC7A ENSGALG00000010020 793 0.708 - - - - - - - 0.708 - - tetratricopeptide repeat domain 7A [Source:NCBI gene;Acc:421414]
50. YIPF6 ENSGALG00000035973 3333 0.707 - - - - - - - 0.707 - - Yip1 domain family member 6 [Source:HGNC Symbol;Acc:HGNC:28304]
51. PLA2G15 ENSGALG00000041787 762 0.707 - - - - - - - - 0.707 - phospholipase A2 group XV [Source:HGNC Symbol;Acc:HGNC:17163]
52. ARSJ ENSGALG00000033286 248 0.705 - - 0.705 - - - - - - - arylsulfatase family member J [Source:HGNC Symbol;Acc:HGNC:26286]
53. HCN2 ENSGALG00000001342 7506 0.702 - - - - - - - 0.702 - - hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2 [Source:HGNC Symbol;Acc:HGNC:4846]
54. DNAH17 1389 0.702 - - - - - - - - 0.702 - dynein axonemal heavy chain 17, transcript variant X6
55. PPP2R2D ENSGALG00000010471 89 0.702 - - - - - - - - 0.702 - protein phosphatase 2 regulatory subunit Bdelta [Source:NCBI gene;Acc:423970]
56. ENSGALG00000027680 ENSGALG00000027680 653 0.7 - - - - - - - - 0.700 -
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA