Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PPP3R1

Gene Name Gene ID Reads Annotation
PPP3R1 ENSGALG00000023648 3417 protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]











Genes with expression patterns similar to PPP3R1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PPP3R1 ENSGALG00000023648 3417 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
2. ATE1 ENSGALG00000009502 3751 1.967 - - - - - - 0.977 0.990 - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
3. AP2B1 ENSGALG00000042125 13229 1.926 - - - - - - 0.967 0.959 - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
4. COX7A2L ENSGALG00000037996 13646 1.869 - - - - - - 0.905 0.964 - - cytochrome c oxidase subunit 7A2 like [Source:NCBI gene;Acc:421392]
5. SFT2D1 ENSGALG00000020005 10855 1.833 - - - - - - 0.878 0.955 - - SFT2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21102]
6. IFNAR2 ENSGALG00000041867 1596 0.996 - - - - - - - 0.996 - - interferon alpha and beta receptor subunit 2 [Source:NCBI gene;Acc:395664]
7. NVL ENSGALG00000009322 5286 0.992 - - - - - - - 0.992 - - nuclear VCP-like [Source:NCBI gene;Acc:421326]
8. TMEM192 ENSGALG00000009528 2428 0.991 - - - - - - - 0.991 - - transmembrane protein 192 [Source:HGNC Symbol;Acc:HGNC:26775]
9. FBF1 ENSGALG00000002179 1738 0.991 - - - - - - - 0.991 - - Fas binding factor 1 [Source:NCBI gene;Acc:770159]
10. CENPL ENSGALG00000038411 4867 0.991 - - - - - - - 0.991 - - centromere protein L [Source:NCBI gene;Acc:426563]
11. SPDYA ENSGALG00000017392 503 0.991 - - - - - - - 0.991 - - speedy/RINGO cell cycle regulator family member A [Source:HGNC Symbol;Acc:HGNC:30613]
12. RFT1 ENSGALG00000001945 2446 0.991 - - - - - - - 0.991 - - RFT1 homolog [Source:NCBI gene;Acc:770487]
13. ZNF319 ENSGALG00000000999 1272 0.991 - - - - - - - 0.991 - - zinc finger protein 319 [Source:HGNC Symbol;Acc:HGNC:13644]
14. SNIP1 ENSGALG00000002010 1429 0.991 - - - - - - - 0.991 - - Smad nuclear interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:30587]
15. RNFT1 ENSGALG00000005205 2888 0.991 - - - - - - - 0.991 - - ring finger protein, transmembrane 1 [Source:HGNC Symbol;Acc:HGNC:30206]
16. SLC35D1 ENSGALG00000011121 4456 0.991 - - - - - - - 0.991 - - solute carrier family 35 member D1 [Source:HGNC Symbol;Acc:HGNC:20800]
17. ELAVL4 ENSGALG00000010533 4978 0.991 - - - - - - - 0.991 - - ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
18. PDCD6IP ENSGALG00000033500 580 0.991 - - - - - - - 0.991 - - programmed cell death 6 interacting protein [Source:NCBI gene;Acc:420725]
19. ENSGALG00000012250 ENSGALG00000012250 581 0.991 - - - - - - - 0.991 - -
20. PIGL ENSGALG00000004492 669 0.991 - - - - - - - 0.991 - - phosphatidylinositol glycan anchor biosynthesis class L, transcript variant X4
21. RNF168 ENSGALG00000006392 507 0.991 - - - - - - - 0.991 - - ring finger protein 168 [Source:HGNC Symbol;Acc:HGNC:26661]
22. ATP2B4 ENSGALG00000003601 3746 0.991 - - - - - - - 0.991 - - ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
23. C6ORF192 C6ORF192 4224 0.991 - - - - - - - 0.991 - -
24. CRELD2 ENSGALG00000008551 2084 0.991 - - - - - - - 0.991 - - cysteine rich with EGF like domains 2 [Source:NCBI gene;Acc:417735]
25. PMP22 ENSGALG00000031425 5358 0.99 - - - - - - - 0.990 - - peripheral myelin protein 22 [Source:NCBI gene;Acc:417327]
26. RAI2 ENSGALG00000016538 1074 0.99 - - - - - - - 0.990 - - retinoic acid induced 2 [Source:HGNC Symbol;Acc:HGNC:9835]
27. FUNDC2 ENSGALG00000029585 9334 0.99 - - - - - - - 0.990 - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
28. TMEM126A ENSGALG00000014066 6149 0.989 - - - - - - - 0.989 - - transmembrane protein 126A [Source:HGNC Symbol;Acc:HGNC:25382]
29. CETN1 ENSGALG00000026741 7243 0.989 - - - - - - - 0.989 - - centrin 1 [Source:NCBI gene;Acc:422668]
30. MAP2K2 ENSGALG00000001267 3857 0.989 - - - - - - - 0.989 - - mitogen-activated protein kinase kinase 2 [Source:NCBI gene;Acc:396349]
31. ALS2 ENSGALG00000008415 2576 0.989 - - - - - - - 0.989 - - ALS2, alsin Rho guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:443]
32. NBL1 ENSGALG00000040297 8165 0.988 - - - - - - - 0.988 - - neuroblastoma 1, DAN family BMP antagonist [Source:NCBI gene;Acc:373952]
33. CDCA7 ENSGALG00000040833 7484 0.988 - - - - - - - 0.988 - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
34. G3BP2 ENSGALG00000010882 21129 0.988 - - - - - - - 0.988 - - G3BP stress granule assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:30291]
35. DLC1 ENSGALG00000013715 5297 0.987 - - - - - - - 0.987 - - DLC1 Rho GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:2897]
36. CRNKL1 ENSGALG00000008429 7280 0.987 - - - - - - - 0.987 - - crooked neck pre-mRNA splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:15762]
37. RCOR3 ENSGALG00000009871 7022 0.987 - - - - - - - 0.987 - - REST corepressor 3 [Source:NCBI gene;Acc:421380]
38. TTL ENSGALG00000008614 3991 0.986 - - - - - - - 0.986 - - tubulin tyrosine ligase [Source:NCBI gene;Acc:416711]
39. PPM1D ENSGALG00000035610 6530 0.984 - - - - - - - 0.984 - - protein phosphatase, Mg2+/Mn2+ dependent 1D [Source:HGNC Symbol;Acc:HGNC:9277]
40. RBM7 ENSGALG00000007017 8779 0.984 - - - - - - - 0.984 - - RNA binding motif protein 7 [Source:NCBI gene;Acc:419760]
41. YAF2 ENSGALG00000009540 8452 0.983 - - - - - - - 0.983 - - YY1 associated factor 2 [Source:NCBI gene;Acc:417790]
42. PDHB ENSGALG00000029576 12254 0.982 - - - - - - - 0.982 - - pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]
43. BFAR ENSGALG00000003111 1778 0.982 - - - - - - 0.982 - - - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
44. EI24 ENSGALG00000038097 24081 0.98 - - - - - - 0.980 - - - EI24, autophagy associated transmembrane protein [Source:NCBI gene;Acc:419711]
45. EXO1 ENSGALG00000010748 7572 0.98 - - - - - - - 0.980 - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
46. METTL11A METTL11A 11876 0.98 - - - - - - 0.980 - - -
47. gga-mir-6587 ENSGALG00000026386 9441 0.979 - - - - - - - 0.979 - - gga-mir-6587 [Source:miRBase;Acc:MI0022407]
48. HACE1 ENSGALG00000015415 1194 0.977 - - - - - - 0.977 - - - HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421788]
49. POLR3E ENSGALG00000007008 4010 0.977 - - - - - - 0.977 - - - RNA polymerase III subunit E [Source:HGNC Symbol;Acc:HGNC:30347]
50. MOB2 ENSGALG00000030499 3658 0.977 - - - - - - 0.977 - - - MOB kinase activator 2 [Source:HGNC Symbol;Acc:HGNC:24904]
51. YBX1 ENSGALG00000004848 20992 0.977 - - - - - - 0.977 - - - Y-box binding protein 1 [Source:NCBI gene;Acc:386575]
52. ARHGAP29 ENSGALG00000005683 3622 0.976 - - - - - - 0.976 - - - Rho GTPase activating protein 29 [Source:NCBI gene;Acc:424488]
53. ABCD3 ENSGALG00000005647 4844 0.976 - - - - - - 0.976 - - - ATP binding cassette subfamily D member 3 [Source:NCBI gene;Acc:424487]
54. PNO1 ENSGALG00000009093 11153 0.975 - - - - - - 0.975 - - - partner of NOB1 homolog [Source:NCBI gene;Acc:769547]
55. SHQ1 ENSGALG00000007798 1982 0.975 - - - - - - 0.975 - - - SHQ1, H/ACA ribonucleoprotein assembly factor [Source:HGNC Symbol;Acc:HGNC:25543]
56. RILPL2 ENSGALG00000003321 5632 0.975 - - - - - - 0.975 - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
57. KCTD9 ENSGALG00000000275 3455 0.975 - - - - - - 0.975 - - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
58. MAP1LC3A ENSGALG00000038721 2230 0.975 - - - - - - 0.975 - - - microtubule associated protein 1 light chain 3 alpha
59. CLCN3 ENSGALG00000009674 3704 0.974 - - - - - - 0.974 - - - chloride voltage-gated channel 3 [Source:HGNC Symbol;Acc:HGNC:2021]
60. EIF4G3 ENSGALG00000010084 5881 0.974 - - - - - - 0.974 - - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
61. IRAK2 ENSGALG00000008407 5934 0.974 - - - - - - 0.974 - - - interleukin 1 receptor associated kinase 2 [Source:NCBI gene;Acc:416118]
62. JSC JSC 7982 0.974 - - - - - - - 0.974 - -
63. MYST2 MYST2 8078 0.973 - - - - - - 0.973 - - -
64. AKAP7 ENSGALG00000029794 3287 0.973 - - - - - - 0.973 - - - A-kinase anchoring protein 7 [Source:HGNC Symbol;Acc:HGNC:377]
65. NDUFB8 ENSGALG00000005704 5781 0.973 - - - - - - 0.973 - - - NADH:ubiquinone oxidoreductase subunit B8 [Source:NCBI gene;Acc:423763]
66. SCRN1 ENSGALG00000011176 3783 0.973 - - - - - - 0.973 - - - secernin 1 [Source:HGNC Symbol;Acc:HGNC:22192]
67. LATS2 4776 0.972 - - - - - - 0.972 - - - large tumor suppressor kinase 2
68. CAMKK2 ENSGALG00000040131 2795 0.972 - - - - - - 0.972 - - - calcium/calmodulin dependent protein kinase kinase 2, transcript variant X9
69. DNAJA3 ENSGALG00000007821 3963 0.972 - - - - - - 0.972 - - - DnaJ heat shock protein family (Hsp40) member A3 [Source:HGNC Symbol;Acc:HGNC:11808]
70. AK6 ENSGALG00000020534 4791 0.971 - - - - - - 0.971 - - - adenylate kinase 6 [Source:NCBI gene;Acc:425215]
71. SLC1A1 ENSGALG00000010187 637 0.97 - - - - - - 0.970 - - - solute carrier family 1 member 1 [Source:HGNC Symbol;Acc:HGNC:10939]
72. ARID4A ENSGALG00000012037 8554 0.97 - - - - - - 0.970 - - - AT-rich interaction domain 4A [Source:NCBI gene;Acc:423541]
73. CETN2 ENSGALG00000007510 1688 0.97 - - - - - - 0.970 - - - centrin 2 [Source:NCBI gene;Acc:422303]
74. ENSGALG00000027854 ENSGALG00000027854 5007 0.97 - - - - - - 0.970 - - -
75. ATN1 ENSGALG00000014554 3270 0.97 - - - - - - 0.970 - - - atrophin 1 [Source:HGNC Symbol;Acc:HGNC:3033]
76. RRN3 ENSGALG00000041989 3934 0.97 - - - - - - 0.970 - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
77. NCOA4 ENSGALG00000002066 10544 0.97 - - - - - - 0.970 - - - nuclear receptor coactivator 4 [Source:NCBI gene;Acc:423615]
78. LMNB2 ENSGALG00000000470 4364 0.969 - - - - - - 0.969 - - - lamin B2 [Source:NCBI gene;Acc:396222]
79. H2AFY_1 ENSGALG00000040141 4895 0.969 - - - - - - 0.969 - - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
80. SREBF2 ENSGALG00000041687 4519 0.968 - - - - - - 0.968 - - - sterol regulatory element binding transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11290]
81. ENSGALG00000002923 ENSGALG00000002923 2233 0.967 - - - - - - 0.967 - - -
82. RBM12B ENSGALG00000035129 4314 0.967 - - - - - - 0.967 - - - RNA binding motif protein 12B [Source:NCBI gene;Acc:420223]
83. TM9SF3 ENSGALG00000005534 15290 0.967 - - - - - - 0.967 - - - transmembrane 9 superfamily member 3
84. RFC3 ENSGALG00000017064 7011 0.967 - - - - - - - 0.967 - - replication factor C subunit 3 [Source:NCBI gene;Acc:418907]
85. NDUFA9 ENSGALG00000017282 14358 0.967 - - - - - - 0.967 - - - NADH:ubiquinone oxidoreductase subunit A9 [Source:NCBI gene;Acc:419039]
86. MTFMT ENSGALG00000007353 805 0.967 - - - - - - 0.967 - - - mitochondrial methionyl-tRNA formyltransferase [Source:HGNC Symbol;Acc:HGNC:29666]
87. INTS10 ENSGALG00000010130 6320 0.966 - - - - - - 0.966 - - - integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
88. GCC2 ENSGALG00000016806 1085 0.966 - - - - - - 0.966 - - - GRIP and coiled-coil domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23218]
89. OGFOD1 6926 0.966 - - - - - - 0.966 - - - 2-oxoglutarate and iron dependent oxygenase domain containing 1
90. KLHL29 ENSGALG00000016495 582 0.966 - - - - - - 0.966 - - - kelch like family member 29 [Source:HGNC Symbol;Acc:HGNC:29404]
91. gga-mir-6643 ENSGALG00000027935 4442 0.965 - - - - - - 0.965 - - - gga-mir-6643 [Source:miRBase;Acc:MI0022462]
92. BCAS1 ENSGALG00000007796 379 0.965 - - - - - - 0.965 - - - breast carcinoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:974]
93. TBCCD1 ENSGALG00000006566 2696 0.965 - - - - - - 0.965 - - - TBCC domain containing 1 [Source:NCBI gene;Acc:424869]
94. XRN1 ENSGALG00000002706 4014 0.965 - - - - - - 0.965 - - - 5'-3' exoribonuclease 1 [Source:HGNC Symbol;Acc:HGNC:30654]
95. DNA2 ENSGALG00000004037 5426 0.965 - - - - - - 0.965 - - - DNA replication helicase/nuclease 2 [Source:NCBI gene;Acc:423688]
96. MED6 ENSGALG00000029743 9414 0.964 - - - - - - 0.964 - - - mediator complex subunit 6 [Source:NCBI gene;Acc:426282]
97. LEPROTL1 ENSGALG00000024482 4251 0.964 - - - - - - 0.964 - - - leptin receptor overlapping transcript-like 1
98. E2F6 ENSGALG00000016454 4747 0.963 - - - - - - 0.963 - - - E2F transcription factor 6 [Source:NCBI gene;Acc:421943]
99. KIAA0196 KIAA0196 4011 0.963 - - - - - - - 0.963 - -
100. POPDC3 ENSGALG00000027420 700 0.963 - - - - - - 0.963 - - - popeye domain containing 3 [Source:NCBI gene;Acc:395434]

There are 163 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA