Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PPP3CB

Gene Name Gene ID Reads Annotation
PPP3CB ENSGALG00000005243 8794 Gallus gallus protein phosphatase 3 catalytic subunit beta (PPP3CB), mRNA. [Source:RefSeq mRNA;Acc:NM_001030340]











Genes with expression patterns similar to PPP3CB

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PPP3CB ENSGALG00000005243 8794 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Gallus gallus protein phosphatase 3 catalytic subunit beta (PPP3CB), mRNA. [Source:RefSeq mRNA;Acc:NM_001030340]
2. TP53INP1 ENSGALG00000041353 6890 1.954 - - - - - - 0.972 0.982 - - tumor protein p53 inducible nuclear protein 1 [Source:NCBI gene;Acc:420232]
3. RPF1 ENSGALG00000008796 9809 1.934 - - - - - - 0.991 0.943 - - ribosome production factor 1 homolog
4. EXOSC7 ENSGALG00000030084 8654 1.682 - - - - - - 0.948 0.734 - - exosome component 7 [Source:NCBI gene;Acc:420704]
5. MYBL2 ENSGALG00000003503 15875 0.994 - - - - - - 0.994 - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
6. CDC5L ENSGALG00000016704 22893 0.993 - - - - - - 0.993 - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
7. ABRACL ENSGALG00000013826 19445 0.991 - - - - - - 0.991 - - - ABRA C-terminal like [Source:NCBI gene;Acc:770205]
8. GALNTL4 GALNTL4 3548 0.991 - - - - - - 0.991 - - -
9. USP9X ENSGALG00000016236 9419 0.99 - - - - - - - 0.990 - - ubiquitin specific peptidase 9, X-linked, transcript variant X3
10. DCAF7 ENSGALG00000000510 8681 0.99 - - - - - - - 0.990 - - DDB1 and CUL4 associated factor 7 [Source:NCBI gene;Acc:771554]
11. CCDC90B ENSGALG00000037072 5088 0.99 - - - - - - 0.990 - - - coiled-coil domain containing 90B [Source:HGNC Symbol;Acc:HGNC:28108]
12. SERBP1 ENSGALG00000011229 30489 0.99 - - - - - - 0.990 - - - SERPINE1 mRNA binding protein 1 [Source:NCBI gene;Acc:424706]
13. USO1 ENSGALG00000010878 9506 0.99 - - - - - - 0.990 - - - USO1 vesicle transport factor [Source:NCBI gene;Acc:422575]
14. TTF1 4214 0.99 - - - - - - 0.990 - - - transcription termination factor 1
15. COMMD8 ENSGALG00000026279 13509 0.99 - - - - - - 0.990 - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
16. LOC424109 ENSGALG00000008738 3932 0.989 - - - - - - 0.989 - - - alpha-aspartyl dipeptidase
17. LONP1 ENSGALG00000040492 7133 0.989 - - - - - - - 0.989 - - lon peptidase 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:9479]
18. GCAT ENSGALG00000012312 7906 0.989 - - - - - - 0.989 - - - glycine C-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:4188]
19. C6H10ORF32 C6H10ORF32 7694 0.989 - - - - - - 0.989 - - -
20. FHL3 ENSGALG00000035187 9753 0.989 - - - - - - 0.989 - - - four and a half LIM domains 3 [Source:HGNC Symbol;Acc:HGNC:3704]
21. gga-mir-1723 ENSGALG00000025386 6662 0.989 - - - - - - 0.989 - - - gga-mir-1723 [Source:miRBase;Acc:MI0007460]
22. DHFR ENSGALG00000026757 18478 0.988 - - - - - - - 0.988 - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
23. MRPS15 ENSGALG00000044433 15356 0.988 - - - - - - 0.988 - - - mitochondrial ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:14504]
24. TRNT1 ENSGALG00000017368 11932 0.988 - - - - - - - 0.988 - - tRNA nucleotidyl transferase 1 [Source:HGNC Symbol;Acc:HGNC:17341]
25. DIS3 ENSGALG00000016930 3696 0.988 - - - - - - 0.988 - - - DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease [Source:HGNC Symbol;Acc:HGNC:20604]
26. GLT8D1 ENSGALG00000001642 4232 0.988 - - - - - - 0.988 - - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
27. ENSGALG00000006730 ENSGALG00000006730 3695 0.988 - - - - - - 0.988 - - -
28. RNF13 ENSGALG00000010411 8749 0.988 - - - - - - 0.988 - - - ring finger protein 13 [Source:NCBI gene;Acc:396303]
29. PRKG1 ENSGALG00000003805 4654 0.988 - - - - - - 0.988 - - - protein kinase cGMP-dependent 1 [Source:HGNC Symbol;Acc:HGNC:9414]
30. MMADHC ENSGALG00000012473 9026 0.988 - - - - - - 0.988 - - - methylmalonic aciduria and homocystinuria, cblD type [Source:NCBI gene;Acc:424311]
31. CNBP 42704 0.988 - - - - - - 0.988 - - - CCHC-type zinc finger nucleic acid binding protein, transcript variant X7
32. SDAD1 ENSGALG00000011543 5191 0.987 - - - - - - - 0.987 - - SDA1 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25537]
33. HCFC2 ENSGALG00000029616 4525 0.987 - - - - - - - 0.987 - - host cell factor C2 [Source:HGNC Symbol;Acc:HGNC:24972]
34. CTNNBL1 ENSGALG00000006817 6765 0.987 - - - - - - 0.987 - - - catenin beta like 1 [Source:HGNC Symbol;Acc:HGNC:15879]
35. APITD1 APITD1 11830 0.987 - - - - - - 0.987 - - -
36. EPHA3 ENSGALG00000015403 9811 0.987 - - - - - - 0.987 - - - EPH receptor A3 [Source:NCBI gene;Acc:396402]
37. ZNF276 ENSGALG00000000513 2410 0.986 - - - - - - 0.986 - - - zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
38. MFN1 ENSGALG00000041873 4170 0.986 - - - - - - - 0.986 - - mitofusin 1 [Source:NCBI gene;Acc:424973]
39. PYURF ENSGALG00000039869 5657 0.986 - - - - - - - 0.986 - - PIGY upstream reading frame [Source:HGNC Symbol;Acc:HGNC:44317]
40. NABP1 ENSGALG00000025884 4195 0.986 - - - - - - - 0.986 - - nucleic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:26232]
41. ABL ABL 9532 0.986 - - - - - - - 0.986 - -
42. NDUFAF2 ENSGALG00000027564 7302 0.986 - - - - - - - 0.986 - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:NCBI gene;Acc:769549]
43. PI4KA ENSGALG00000040756 3973 0.986 - - - - - - - 0.986 - - phosphatidylinositol 4-kinase alpha [Source:HGNC Symbol;Acc:HGNC:8983]
44. CCAR1 ENSGALG00000004108 13219 0.986 - - - - - - 0.986 - - - cell division cycle and apoptosis regulator 1 [Source:HGNC Symbol;Acc:HGNC:24236]
45. SYNE2 ENSGALG00000011811 5542 0.985 - - - - - - - 0.985 - - spectrin repeat containing nuclear envelope protein 2 [Source:HGNC Symbol;Acc:HGNC:17084]
46. MOB4 ENSGALG00000008128 10322 0.985 - - - - - - 0.985 - - - MOB family member 4, phocein [Source:NCBI gene;Acc:429007]
47. UBQLN1 ENSGALG00000012585 5158 0.985 - - - - - - - 0.985 - - ubiquilin 1 [Source:HGNC Symbol;Acc:HGNC:12508]
48. LOC425795 ENSGALG00000027696 2357 0.985 - - - - - - 0.985 - - - ectoderm-neural cortex protein 1-like, transcript variant X1
49. CHL1 ENSGALG00000037856 1565 0.984 - - - - - - 0.984 - - - cell adhesion molecule L1 like [Source:HGNC Symbol;Acc:HGNC:1939]
50. SNAPIN ENSGALG00000026796 11155 0.984 - - - - - - 0.984 - - - SNAP associated protein [Source:HGNC Symbol;Acc:HGNC:17145]
51. DARS ENSGALG00000012355 2887 0.984 - - - - - - - 0.984 - - aspartyl-tRNA synthetase [Source:NCBI gene;Acc:424296]
52. ATPAF2 ENSGALG00000004926 3393 0.984 - - - - - - 0.984 - - - ATP synthase mitochondrial F1 complex assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:18802]
53. CRAC1A CRAC1A 5265 0.984 - - - - - - 0.984 - - -
54. POLR2C ENSGALG00000001168 10703 0.984 - - - - - - 0.984 - - - RNA polymerase II subunit C [Source:NCBI gene;Acc:415635]
55. SNAI1 ENSGALG00000008018 3930 0.983 - - - - - - - 0.983 - - snail family transcriptional repressor 1 [Source:NCBI gene;Acc:396047]
56. CSDE1 ENSGALG00000002139 1683 0.983 - - - - - - 0.983 - - - cold shock domain containing E1 [Source:NCBI gene;Acc:419886]
57. SOCS5 ENSGALG00000010016 1134 0.983 - - - - - - - 0.983 - - suppressor of cytokine signaling 5 [Source:NCBI gene;Acc:428570]
58. LUZP2 ENSGALG00000030151 585 0.983 - - - - - - 0.983 - - - leucine zipper protein 2 [Source:NCBI gene;Acc:423001]
59. PSMD13 ENSGALG00000043684 14720 0.983 - - - - - - 0.983 - - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
60. SAV1 ENSGALG00000012341 3313 0.983 - - - - - - 0.983 - - - salvador family WW domain containing protein 1 [Source:HGNC Symbol;Acc:HGNC:17795]
61. ACTR10 ENSGALG00000012041 2752 0.983 - - - - - - - 0.983 - - actin-related protein 10 homolog [Source:NCBI gene;Acc:423543]
62. RPUSD4 ENSGALG00000024326 3788 0.983 - - - - - - 0.983 - - - RNA pseudouridylate synthase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25898]
63. C3H6ORF120 C3H6ORF120 2712 0.983 - - - - - - - 0.983 - -
64. DNAJC10 ENSGALG00000008862 3114 0.983 - - - - - - 0.983 - - - DnaJ heat shock protein family (Hsp40) member C10 [Source:HGNC Symbol;Acc:HGNC:24637]
65. COMMD7 ENSGALG00000006630 11491 0.983 - - - - - - - 0.983 - - COMM domain containing 7 [Source:NCBI gene;Acc:419286]
66. LYVE1 ENSGALG00000005643 1230 0.983 - - - - - - 0.983 - - - lymphatic vessel endothelial hyaluronan receptor 1 [Source:NCBI gene;Acc:423038]
67. ST5 6869 0.983 - - - - - - - 0.983 - - suppression of tumorigenicity 5, transcript variant X1
68. PDZD11 ENSGALG00000004198 11484 0.982 - - - - - - - 0.982 - - PDZ domain containing 11 [Source:NCBI gene;Acc:422153]
69. WDR47 ENSGALG00000002129 2624 0.982 - - - - - - - 0.982 - - WD repeat domain 47 [Source:HGNC Symbol;Acc:HGNC:29141]
70. ENSGALG00000004643 ENSGALG00000004643 2297 0.982 - - - - - - - 0.982 - -
71. HIC2 ENSGALG00000033416 4051 0.982 - - - - - - - 0.982 - - hypermethylated in cancer 2 [Source:NCBI gene;Acc:416768]
72. MAPT ENSGALG00000000625 659 0.982 - - - - - - 0.982 - - - microtubule associated protein tau [Source:NCBI gene;Acc:426737]
73. RP2 ENSGALG00000016728 3291 0.982 - - - - - - - 0.982 - - RP2, ARL3 GTPase activating protein [Source:NCBI gene;Acc:418675]
74. LHFPL2 ENSGALG00000004437 500 0.982 - - - - - - 0.982 - - - LHFPL tetraspan subfamily member 2 [Source:HGNC Symbol;Acc:HGNC:6588]
75. LYPLA2 ENSGALG00000004002 3939 0.982 - - - - - - - 0.982 - - lysophospholipase II [Source:NCBI gene;Acc:419685]
76. RRAGD ENSGALG00000026971 2429 0.982 - - - - - - - 0.982 - - Ras related GTP binding D [Source:HGNC Symbol;Acc:HGNC:19903]
77. RGMA ENSGALG00000039173 12874 0.982 - - - - - - - 0.982 - - repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]
78. RFWD3 2315 0.981 - - - - - - - 0.981 - - ring finger and WD repeat domain 3
79. DIP2C ENSGALG00000006652 1858 0.981 - - - - - - - 0.981 - - disco interacting protein 2 homolog C [Source:HGNC Symbol;Acc:HGNC:29150]
80. ANLN 10479 0.981 - - - - - - 0.981 - - - anillin actin binding protein, transcript variant X2
81. PHF12 ENSGALG00000031368 1960 0.981 - - - - - - - 0.981 - - PHD finger protein 12 [Source:HGNC Symbol;Acc:HGNC:20816]
82. DACH1 ENSGALG00000037015 5648 0.981 - - - - - - - 0.981 - - dachshund family transcription factor 1 [Source:NCBI gene;Acc:373935]
83. TMEFF1 ENSGALG00000013212 4222 0.981 - - - - - - - 0.981 - - transmembrane protein with EGF-like and two follistatin-like domains 1
84. CDC123 ENSGALG00000014038 1418 0.981 - - - - - - - 0.981 - - cell division cycle 123 [Source:HGNC Symbol;Acc:HGNC:16827]
85. CUTC ENSGALG00000037283 2530 0.981 - - - - - - - 0.981 - - cutC copper transporter [Source:NCBI gene;Acc:423829]
86. NOB1 ENSGALG00000000693 15442 0.981 - - - - - - 0.981 - - - NIN1 (RPN12) binding protein 1 homolog [Source:HGNC Symbol;Acc:HGNC:29540]
87. GALNT1 ENSGALG00000013135 13583 0.98 - - - - - - - 0.980 - - polypeptide N-acetylgalactosaminyltransferase 1 [Source:NCBI gene;Acc:420955]
88. POLB ENSGALG00000040828 7462 0.98 - - - - - - 0.980 - - - DNA polymerase beta [Source:HGNC Symbol;Acc:HGNC:9174]
89. ACTR6 ENSGALG00000040976 31271 0.98 - - - - - - 0.980 - - - ARP6 actin-related protein 6 homolog [Source:NCBI gene;Acc:395348]
90. TOLLIP ENSGALG00000006697 917 0.98 - - - - - - - 0.980 - - toll interacting protein [Source:NCBI gene;Acc:423099]
91. ZNF639 ENSGALG00000005944 6387 0.979 - - - - - - - 0.979 - - zinc finger protein 639 [Source:NCBI gene;Acc:425280]
92. DTD2 ENSGALG00000009978 4322 0.979 - - - - - - - 0.979 - - D-tyrosyl-tRNA deacylase 2 (putative) [Source:HGNC Symbol;Acc:HGNC:20277]
93. FAM114A1 ENSGALG00000013583 736 0.979 - - - - - - - 0.979 - - family with sequence similarity 114 member A1 [Source:NCBI gene;Acc:426196]
94. DERL3 ENSGALG00000005994 1499 0.979 - - - - - - - 0.979 - - derlin 3 [Source:NCBI gene;Acc:416934]
95. TTC39A ENSGALG00000010540 1025 0.979 - - - - - - - 0.979 - - tetratricopeptide repeat domain 39A [Source:HGNC Symbol;Acc:HGNC:18657]
96. SPINT1 ENSGALG00000008469 5735 0.979 - - - - - - 0.979 - - - serine peptidase inhibitor, Kunitz type 1, transcript variant X2
97. ENSGALG00000013825 ENSGALG00000013825 16473 0.979 - - - - - - 0.979 - - -
98. FGD5 ENSGALG00000008546 4031 0.979 - - - - - - 0.979 - - - FYVE, RhoGEF and PH domain containing 5 [Source:HGNC Symbol;Acc:HGNC:19117]
99. USP3 ENSGALG00000003427 1236 0.978 - - - - - - - 0.978 - - ubiquitin specific peptidase 3 [Source:HGNC Symbol;Acc:HGNC:12626]
100. OLFM1 ENSGALG00000002515 1841 0.978 - - - - - - - 0.978 - - olfactomedin 1 [Source:NCBI gene;Acc:395535]

There are 111 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA