Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PPP1CB

Gene Name Gene ID Reads Annotation
PPP1CB ENSGALG00000010026 6909 protein phosphatase 1 catalytic subunit beta [Source:NCBI gene;Acc:396019]











Genes with expression patterns similar to PPP1CB

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PPP1CB ENSGALG00000010026 6909 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein phosphatase 1 catalytic subunit beta [Source:NCBI gene;Acc:396019]
2. FAM206A ENSGALG00000019524 7170 1.888 - - - - - - 0.997 0.891 - - family with sequence similarity 206 member A [Source:NCBI gene;Acc:420983]
3. LARS ENSGALG00000007494 13966 1.73 - - - 0.753 - - 0.977 - - - leucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:6512]
4. GFPT1 ENSGALG00000036391 14025 1.724 - - - 0.740 - - 0.984 - - - glutamine--fructose-6-phosphate transaminase 1 [Source:NCBI gene;Acc:419514]
5. MAP3K4 ENSGALG00000020003 6378 1.644 - - - 0.734 - - - 0.910 - - mitogen-activated protein kinase kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6856]
6. WDYHV1 ENSGALG00000030059 2961 1.641 - - - 0.794 - - - 0.847 - - WDYHV motif containing 1 [Source:HGNC Symbol;Acc:HGNC:25490]
7. CUL5 ENSGALG00000017165 2480 1.64 - - - 0.774 - - - 0.866 - - cullin 5 [Source:HGNC Symbol;Acc:HGNC:2556]
8. NUDT4 ENSGALG00000011285 2998 1.625 - - - 0.776 - - - 0.849 - - nudix hydrolase 4, transcript variant X5
9. TK2 ENSGALG00000034216 5394 1.622 - - - 0.827 - - - 0.795 - - thymidine kinase 2, mitochondrial [Source:NCBI gene;Acc:427551]
10. RARRES2 ENSGALG00000042642 3043 0.998 - - - - - - 0.998 - - - retinoic acid receptor responder (tazarotene induced) 2 [Source:NCBI gene;Acc:420366]
11. FAAH ENSGALG00000010433 3309 0.998 - - - - - - 0.998 - - - fatty acid amide hydrolase [Source:HGNC Symbol;Acc:HGNC:3553]
12. TRIM37 ENSGALG00000005084 4036 0.998 - - - - - - 0.998 - - - tripartite motif containing 37 [Source:NCBI gene;Acc:417628]
13. VPS41 ENSGALG00000031635 4391 0.998 - - - - - - 0.998 - - - VPS41, HOPS complex subunit [Source:NCBI gene;Acc:420762]
14. USP34 ENSGALG00000004455 6667 0.998 - - - - - - 0.998 - - - ubiquitin specific peptidase 34 [Source:NCBI gene;Acc:421193]
15. C-MET C-MET 1650 0.998 - - - - - - 0.998 - - -
16. ZCCHC17 ENSGALG00000000618 5163 0.998 - - - - - - 0.998 - - - zinc finger CCHC-type containing 17 [Source:NCBI gene;Acc:404295]
17. HOXB3 ENSGALG00000043219 5198 0.998 - - - - - - 0.998 - - - homeobox B3 [Source:NCBI gene;Acc:395502]
18. POGZ ENSGALG00000036365 4056 0.998 - - - - - - 0.998 - - - pogo transposable element with ZNF domain, transcript variant X2
19. SF3A1 ENSGALG00000007937 11716 0.997 - - - - - - 0.997 - - - splicing factor 3a subunit 1 [Source:NCBI gene;Acc:427717]
20. SH2D3C ENSGALG00000005036 5101 0.997 - - - - - - 0.997 - - - SH2 domain containing 3C [Source:HGNC Symbol;Acc:HGNC:16884]
21. GTF2I ENSGALG00000021665 6812 0.997 - - - - - - 0.997 - - - general transcription factor IIi [Source:HGNC Symbol;Acc:HGNC:4659]
22. SAMM50 ENSGALG00000014194 20437 0.997 - - - - - - 0.997 - - - SAMM50 sorting and assembly machinery component [Source:NCBI gene;Acc:418234]
23. CASC4 ENSGALG00000008208 8338 0.997 - - - - - - 0.997 - - - cancer susceptibility 4 [Source:NCBI gene;Acc:415575]
24. TLE4 TLE4 7278 0.997 - - - - - - 0.997 - - -
25. CCDC47 ENSGALG00000000564 6584 0.997 - - - - - - 0.997 - - - coiled-coil domain containing 47 [Source:HGNC Symbol;Acc:HGNC:24856]
26. BID ENSGALG00000013039 12427 0.997 - - - - - - 0.997 - - - BH3 interacting domain death agonist [Source:NCBI gene;Acc:395236]
27. WDR33 ENSGALG00000002043 6340 0.997 - - - - - - 0.997 - - - WD repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:25651]
28. SLC9A3R2 ENSGALG00000005608 4220 0.997 - - - - - - 0.997 - - - SLC9A3 regulator 2 [Source:HGNC Symbol;Acc:HGNC:11076]
29. EIF5B ENSGALG00000016764 30681 0.996 - - - - - - 0.996 - - - eukaryotic translation initiation factor 5B [Source:NCBI gene;Acc:395514]
30. GAS41 GAS41 9941 0.996 - - - - - - 0.996 - - -
31. TMEM9B ENSGALG00000005908 14074 0.995 - - - - - - 0.995 - - - TMEM9 domain family member B [Source:HGNC Symbol;Acc:HGNC:1168]
32. STT3B ENSGALG00000011465 11939 0.995 - - - - - - 0.995 - - - STT3B, catalytic subunit of the oligosaccharyltransferase complex [Source:NCBI gene;Acc:428444]
33. PCNA ENSGALG00000029292 19163 0.994 - - - - - - 0.994 - - - proliferating cell nuclear antigen [Source:NCBI gene;Acc:373984]
34. BTG1 ENSGALG00000011276 17496 0.994 - - - - - - 0.994 - - - BTG anti-proliferation factor 1 [Source:NCBI gene;Acc:396295]
35. NSF ENSGALG00000001055 7399 0.994 - - - - - - 0.994 - - - N-ethylmaleimide sensitive factor, vesicle fusing ATPase [Source:NCBI gene;Acc:419972]
36. SSR1 ENSGALG00000012798 62626 0.994 - - - - - - 0.994 - - - signal sequence receptor subunit 1 [Source:NCBI gene;Acc:420871]
37. PPP1R8 ENSGALG00000000729 11797 0.993 - - - - - - 0.993 - - - protein phosphatase 1 regulatory subunit 8 [Source:NCBI gene;Acc:419564]
38. FKBP9 ENSGALG00000037669 12079 0.992 - - - - - - 0.992 - - - FK506 binding protein 9 [Source:NCBI gene;Acc:395652]
39. MTF2 ENSGALG00000043087 15225 0.99 - - - - - - 0.990 - - - metal response element binding transcription factor 2 [Source:NCBI gene;Acc:395174]
40. FANCC ENSGALG00000012618 7002 0.989 - - - - - - 0.989 - - - FA complementation group C [Source:NCBI gene;Acc:427468]
41. NAA15 ENSGALG00000009782 18563 0.989 - - - - - - 0.989 - - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit [Source:HGNC Symbol;Acc:HGNC:30782]
42. STK3 ENSGALG00000032850 6339 0.985 - - - - - - 0.985 - - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
43. LPHN2 LPHN2 16507 0.983 - - - - - - 0.983 - - -
44. OLFML3 ENSGALG00000001956 28633 0.982 - - - - - - 0.982 - - - olfactomedin like 3 [Source:NCBI gene;Acc:419882]
45. NOL9 ENSGALG00000028958 23978 0.967 - - - - - - 0.967 - - - nucleolar protein 9 [Source:HGNC Symbol;Acc:HGNC:26265]
46. SRSF7 ENSGALG00000033120 43444 0.961 - - - - - - 0.961 - - - serine and arginine rich splicing factor 7 [Source:NCBI gene;Acc:426265]
47. PKM ENSGALG00000001992 93960 0.934 - - - - - - 0.934 - - - pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
48. TTPAL ENSGALG00000004244 2734 0.93 - - - - - - - 0.930 - - alpha tocopherol transfer protein like [Source:NCBI gene;Acc:419197]
49. SYNCRIP ENSGALG00000015830 30555 0.92 - - - - - - 0.920 - - - synaptotagmin binding cytoplasmic RNA interacting protein [Source:NCBI gene;Acc:421831]
50. ENSGALG00000014375 ENSGALG00000014375 4741 0.92 - - - - - - - 0.920 - -
51. GOLPH3 ENSGALG00000028267 9692 0.917 - - - - - - - 0.917 - - golgi phosphoprotein 3, transcript variant X1
52. CHCHD6 ENSGALG00000006056 6121 0.915 - - - - - - - 0.915 - - coiled-coil-helix-coiled-coil-helix domain containing 6 [Source:HGNC Symbol;Acc:HGNC:28184]
53. XRCC3 ENSGALG00000011533 3768 0.915 - - - - - - - 0.915 - - X-ray repair cross complementing 3 [Source:NCBI gene;Acc:423485]
54. HAUS6 ENSGALG00000015091 9671 0.914 - - - - - - - 0.914 - - HAUS augmin like complex subunit 6 [Source:NCBI gene;Acc:427238]
55. CNEP1R1 ENSGALG00000029793 6536 0.913 - - - - - - - 0.913 - - CTD nuclear envelope phosphatase 1 regulatory subunit 1 [Source:NCBI gene;Acc:415736]
56. ACTG1 ENSGALG00000001381 63905 0.912 - - - - - - 0.912 - - - Actin, gamma 1 [Source:NCBI gene;Acc:415296]
57. COG5 ENSGALG00000042764 4205 0.911 - - - - - - - 0.911 - - component of oligomeric golgi complex 5 [Source:NCBI gene;Acc:417704]
58. DNA2 ENSGALG00000004037 5426 0.91 - - - - - - - 0.910 - - DNA replication helicase/nuclease 2 [Source:NCBI gene;Acc:423688]
59. SRP19 ENSGALG00000000218 14207 0.91 - - - - - - - 0.910 - - signal recognition particle 19 [Source:HGNC Symbol;Acc:HGNC:11300]
60. POLR1C ENSGALG00000010349 7059 0.909 - - - - - - - 0.909 - - RNA polymerase I and III subunit C [Source:NCBI gene;Acc:421452]
61. RGN ENSGALG00000016724 3184 0.909 - - - - - - - 0.909 - - regucalcin [Source:NCBI gene;Acc:395480]
62. PPM1B ENSGALG00000030691 4513 0.908 - - - - - - - 0.908 - - protein phosphatase, Mg2+/Mn2+ dependent 1B [Source:NCBI gene;Acc:421404]
63. PDGF-A PDGF-A 5166 0.905 - - - - - - - 0.905 - -
64. TMEM33 ENSGALG00000014248 6069 0.904 - - - - - - - 0.904 - - transmembrane protein 33 [Source:HGNC Symbol;Acc:HGNC:25541]
65. CHMP2B ENSGALG00000015496 3973 0.904 - - - - - - - 0.904 - - charged multivesicular body protein 2B [Source:NCBI gene;Acc:418461]
66. CENPI ENSGALG00000005038 2608 0.903 - - - - - - - 0.903 - - centromere protein I [Source:NCBI gene;Acc:395207]
67. TST ENSGALG00000012488 5314 0.903 - - - - - - - 0.903 - - thiosulfate sulfurtransferase [Source:NCBI gene;Acc:418049]
68. SERINC1 ENSGALG00000014868 12484 0.901 - - - - - - - 0.901 - - serine incorporator 1 [Source:NCBI gene;Acc:421722]
69. ENSGALG00000009863 ENSGALG00000009863 7375 0.9 - - - - - - - 0.900 - -
70. C10ORF58 C10ORF58 5045 0.9 - - - - - - - 0.900 - -
71. MADH2 MADH2 13017 0.898 - - - - - - - 0.898 - -
72. LSMD1 LSMD1 2562 0.897 - - - - - - - 0.897 - -
73. RSRC2 ENSGALG00000004493 9008 0.896 - - - - - - - 0.896 - - arginine and serine rich coiled-coil 2 [Source:NCBI gene;Acc:416864]
74. ESRRG ENSGALG00000009645 2783 0.895 - - - - - - - 0.895 - - estrogen related receptor gamma [Source:NCBI gene;Acc:421357]
75. CHTF8 ENSGALG00000000632 7230 0.895 - - - - - - - 0.895 - - chromosome transmission fidelity factor 8 [Source:NCBI gene;Acc:769609]
76. ZNF598 ENSGALG00000005598 8270 0.893 - - - - - - - 0.893 - - zinc finger protein 598 [Source:HGNC Symbol;Acc:HGNC:28079]
77. DNAJC3 ENSGALG00000016894 9048 0.891 - - - - - - - 0.891 - - DnaJ heat shock protein family (Hsp40) member C3 [Source:NCBI gene;Acc:418787]
78. FBXW5 ENSGALG00000030831 5927 0.888 - - - - - - - 0.888 - - F-box and WD repeat domain containing 5 [Source:NCBI gene;Acc:417289]
79. PLA2G12A ENSGALG00000012185 5261 0.887 - - - - - - - 0.887 - - phospholipase A2 group XIIA [Source:HGNC Symbol;Acc:HGNC:18554]
80. SMARCD2 ENSGALG00000029304 11867 0.887 - - - - - - - 0.887 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:HGNC Symbol;Acc:HGNC:11107]
81. KCNK5 ENSGALG00000034077 3233 0.885 - - - 0.885 - - - - - - potassium two pore domain channel subfamily K member 5 [Source:HGNC Symbol;Acc:HGNC:6280]
82. RHPN2 ENSGALG00000004814 1865 0.885 - - - - - - - 0.885 - - rhophilin Rho GTPase binding protein 2 [Source:HGNC Symbol;Acc:HGNC:19974]
83. ZBED4 ENSGALG00000032659 5313 0.885 - - - - - - - 0.885 - - zinc finger BED-type containing 4 [Source:NCBI gene;Acc:417734]
84. USP12P1 USP12P1 4193 0.884 - - - - - - - 0.884 - -
85. GNB2L1 ENSGALG00000000122 194871 0.884 - - - - - - 0.884 - - - receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
86. ATAD2 ENSGALG00000034348 4440 0.884 - - - - - - - 0.884 - - ATPase family, AAA domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30123]
87. TNNC1 ENSGALG00000001459 7110 0.884 - - - - - - - 0.884 - - troponin C1, slow skeletal and cardiac type [Source:NCBI gene;Acc:396032]
88. HEY1 ENSGALG00000035031 8795 0.883 - - - - - - - 0.883 - - hes related family bHLH transcription factor with YRPW motif 1 [Source:HGNC Symbol;Acc:HGNC:4880]
89. OSBPL1A ENSGALG00000015086 2702 0.882 - - - - - - - 0.882 - - oxysterol binding protein like 1A [Source:HGNC Symbol;Acc:HGNC:16398]
90. TMEM185A ENSGALG00000009139 4424 0.88 - - - - - - - 0.880 - - transmembrane protein 185A [Source:HGNC Symbol;Acc:HGNC:17125]
91. SUN1 ENSGALG00000003781 3442 0.88 - - - - - - - 0.880 - - Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
92. TMA16 ENSGALG00000009501 6651 0.88 - - - - - - - 0.880 - - translation machinery associated 16 homolog [Source:HGNC Symbol;Acc:HGNC:25638]
93. MRPL39 ENSGALG00000015742 7025 0.88 - - - - - - - 0.880 - - mitochondrial ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:14027]
94. TAF1B ENSGALG00000016437 2318 0.879 - - - - - - - 0.879 - - TATA-box binding protein associated factor, RNA polymerase I subunit B [Source:NCBI gene;Acc:421933]
95. SFSWAP ENSGALG00000002487 9977 0.879 - - - - - - 0.879 - - - splicing factor SWAP [Source:HGNC Symbol;Acc:HGNC:10790]
96. SCHIP1 ENSGALG00000039468 5912 0.879 - - - - - - - 0.879 - - schwannomin interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:15678]
97. RPS6KA RPS6KA 6745 0.877 - - - - - - - 0.877 - -
98. NUP88 ENSGALG00000032280 9847 0.875 - - - - - - - 0.875 - - nucleoporin 88 [Source:HGNC Symbol;Acc:HGNC:8067]
99. ENSGALG00000017324 ENSGALG00000017324 8235 0.875 - - - - - - - 0.875 - -
100. ATXN2 ENSGALG00000004625 6306 0.874 - - - - - - - 0.874 - - ataxin 2 [Source:HGNC Symbol;Acc:HGNC:10555]

There are 310 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA