Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PPM1D

Gene Name Gene ID Reads Annotation
PPM1D ENSGALG00000035610 6530 protein phosphatase, Mg2+/Mn2+ dependent 1D [Source:HGNC Symbol;Acc:HGNC:9277]











Genes with expression patterns similar to PPM1D

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PPM1D ENSGALG00000035610 6530 9 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein phosphatase, Mg2+/Mn2+ dependent 1D [Source:HGNC Symbol;Acc:HGNC:9277]
2. CETN1 ENSGALG00000026741 7243 1.731 - - - - - - 0.738 0.993 - - centrin 1 [Source:NCBI gene;Acc:422668]
3. RFT1 ENSGALG00000001945 2446 1.724 - - - - - - 0.734 0.990 - - RFT1 homolog [Source:NCBI gene;Acc:770487]
4. GTF2H5 ENSGALG00000013733 12293 1.707 - - - - - - 0.873 0.834 - - general transcription factor IIH subunit 5 [Source:NCBI gene;Acc:769754]
5. GARS ENSGALG00000005694 18264 1.672 - - - - - - 0.700 0.972 - - glycyl-tRNA synthetase [Source:NCBI gene;Acc:428403]
6. SLC25A39 ENSGALG00000042894 10654 1.613 - - - - - - - 0.904 - 0.709 solute carrier family 25 member 39 [Source:HGNC Symbol;Acc:HGNC:24279]
7. TRIP12 ENSGALG00000002929 11713 1.487 - - - - - - 0.748 0.739 - - thyroid hormone receptor interactor 12 [Source:HGNC Symbol;Acc:HGNC:12306]
8. FUNDC2 ENSGALG00000029585 9334 0.995 - - - - - - - 0.995 - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
9. RCOR3 ENSGALG00000009871 7022 0.994 - - - - - - - 0.994 - - REST corepressor 3 [Source:NCBI gene;Acc:421380]
10. CENPL ENSGALG00000038411 4867 0.993 - - - - - - - 0.993 - - centromere protein L [Source:NCBI gene;Acc:426563]
11. RNFT1 ENSGALG00000005205 2888 0.993 - - - - - - - 0.993 - - ring finger protein, transmembrane 1 [Source:HGNC Symbol;Acc:HGNC:30206]
12. PDHB ENSGALG00000029576 12254 0.993 - - - - - - - 0.993 - - pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]
13. gga-mir-6587 ENSGALG00000026386 9441 0.992 - - - - - - - 0.992 - - gga-mir-6587 [Source:miRBase;Acc:MI0022407]
14. TMEM192 ENSGALG00000009528 2428 0.992 - - - - - - - 0.992 - - transmembrane protein 192 [Source:HGNC Symbol;Acc:HGNC:26775]
15. TMEM126A ENSGALG00000014066 6149 0.992 - - - - - - - 0.992 - - transmembrane protein 126A [Source:HGNC Symbol;Acc:HGNC:25382]
16. CRNKL1 ENSGALG00000008429 7280 0.992 - - - - - - - 0.992 - - crooked neck pre-mRNA splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:15762]
17. RBM7 ENSGALG00000007017 8779 0.992 - - - - - - - 0.992 - - RNA binding motif protein 7 [Source:NCBI gene;Acc:419760]
18. CDCA7 ENSGALG00000040833 7484 0.991 - - - - - - - 0.991 - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
19. DLC1 ENSGALG00000013715 5297 0.991 - - - - - - - 0.991 - - DLC1 Rho GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:2897]
20. C6ORF192 C6ORF192 4224 0.991 - - - - - - - 0.991 - -
21. EXO1 ENSGALG00000010748 7572 0.99 - - - - - - - 0.990 - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
22. NBL1 ENSGALG00000040297 8165 0.99 - - - - - - - 0.990 - - neuroblastoma 1, DAN family BMP antagonist [Source:NCBI gene;Acc:373952]
23. ATE1 ENSGALG00000009502 3751 0.99 - - - - - - - 0.990 - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
24. PMP22 ENSGALG00000031425 5358 0.99 - - - - - - - 0.990 - - peripheral myelin protein 22 [Source:NCBI gene;Acc:417327]
25. NVL ENSGALG00000009322 5286 0.99 - - - - - - - 0.990 - - nuclear VCP-like [Source:NCBI gene;Acc:421326]
26. G3BP2 ENSGALG00000010882 21129 0.989 - - - - - - - 0.989 - - G3BP stress granule assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:30291]
27. CRELD2 ENSGALG00000008551 2084 0.989 - - - - - - - 0.989 - - cysteine rich with EGF like domains 2 [Source:NCBI gene;Acc:417735]
28. RAI2 ENSGALG00000016538 1074 0.989 - - - - - - - 0.989 - - retinoic acid induced 2 [Source:HGNC Symbol;Acc:HGNC:9835]
29. MAP2K2 ENSGALG00000001267 3857 0.989 - - - - - - - 0.989 - - mitogen-activated protein kinase kinase 2 [Source:NCBI gene;Acc:396349]
30. SLC35D1 ENSGALG00000011121 4456 0.989 - - - - - - - 0.989 - - solute carrier family 35 member D1 [Source:HGNC Symbol;Acc:HGNC:20800]
31. ZNF319 ENSGALG00000000999 1272 0.988 - - - - - - - 0.988 - - zinc finger protein 319 [Source:HGNC Symbol;Acc:HGNC:13644]
32. SPDYA ENSGALG00000017392 503 0.987 - - - - - - - 0.987 - - speedy/RINGO cell cycle regulator family member A [Source:HGNC Symbol;Acc:HGNC:30613]
33. PIGL ENSGALG00000004492 669 0.987 - - - - - - - 0.987 - - phosphatidylinositol glycan anchor biosynthesis class L, transcript variant X4
34. ENSGALG00000012250 ENSGALG00000012250 581 0.987 - - - - - - - 0.987 - -
35. ATP2B4 ENSGALG00000003601 3746 0.987 - - - - - - - 0.987 - - ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
36. SNIP1 ENSGALG00000002010 1429 0.987 - - - - - - - 0.987 - - Smad nuclear interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:30587]
37. ELAVL4 ENSGALG00000010533 4978 0.987 - - - - - - - 0.987 - - ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
38. FBF1 ENSGALG00000002179 1738 0.986 - - - - - - - 0.986 - - Fas binding factor 1 [Source:NCBI gene;Acc:770159]
39. RNF168 ENSGALG00000006392 507 0.986 - - - - - - - 0.986 - - ring finger protein 168 [Source:HGNC Symbol;Acc:HGNC:26661]
40. PDCD6IP ENSGALG00000033500 580 0.986 - - - - - - - 0.986 - - programmed cell death 6 interacting protein [Source:NCBI gene;Acc:420725]
41. TTL ENSGALG00000008614 3991 0.985 - - - - - - - 0.985 - - tubulin tyrosine ligase [Source:NCBI gene;Acc:416711]
42. ALS2 ENSGALG00000008415 2576 0.985 - - - - - - - 0.985 - - ALS2, alsin Rho guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:443]
43. PPP3R1 ENSGALG00000023648 3417 0.984 - - - - - - - 0.984 - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
44. YAF2 ENSGALG00000009540 8452 0.983 - - - - - - - 0.983 - - YY1 associated factor 2 [Source:NCBI gene;Acc:417790]
45. COX7A2L ENSGALG00000037996 13646 0.981 - - - - - - - 0.981 - - cytochrome c oxidase subunit 7A2 like [Source:NCBI gene;Acc:421392]
46. JSC JSC 7982 0.981 - - - - - - - 0.981 - -
47. IFNAR2 ENSGALG00000041867 1596 0.979 - - - - - - - 0.979 - - interferon alpha and beta receptor subunit 2 [Source:NCBI gene;Acc:395664]
48. RFC3 ENSGALG00000017064 7011 0.971 - - - - - - - 0.971 - - replication factor C subunit 3 [Source:NCBI gene;Acc:418907]
49. AP2B1 ENSGALG00000042125 13229 0.97 - - - - - - - 0.970 - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
50. KIAA0196 KIAA0196 4011 0.962 - - - - - - - 0.962 - -
51. SBNO1 ENSGALG00000003392 6731 0.957 - - - - - - - 0.957 - - strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
52. XPO5 ENSGALG00000010341 24765 0.955 - - - - - - - 0.955 - - exportin 5 [Source:NCBI gene;Acc:421450]
53. PRTG ENSGALG00000037336 34665 0.954 - - - - - - - 0.954 - - protogenin [Source:NCBI gene;Acc:415407]
54. TPD52 ENSGALG00000040167 9891 0.954 - - - - - - - 0.954 - - tumor protein D52 [Source:NCBI gene;Acc:770339]
55. INPP5A ENSGALG00000010493 6769 0.953 - - - - - - - 0.953 - - inositol polyphosphate-5-phosphatase A [Source:HGNC Symbol;Acc:HGNC:6076]
56. SFT2D1 ENSGALG00000020005 10855 0.951 - - - - - - - 0.951 - - SFT2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21102]
57. NUP107 ENSGALG00000009934 2097 0.949 - - - - - - - 0.949 - - nucleoporin 107 [Source:NCBI gene;Acc:101751988]
58. ANKRD11 ENSGALG00000006222 12327 0.944 - - - - - - - 0.944 - - ankyrin repeat domain 11, transcript variant X2
59. MRPL54 ENSGALG00000027611 39450 0.935 - - - - - - - 0.935 - - mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]
60. XRCC5 ENSGALG00000011492 6802 0.934 - - - - - - - 0.934 - - X-ray repair cross complementing 5 [Source:HGNC Symbol;Acc:HGNC:12833]
61. PPA2 ENSGALG00000010582 22301 0.926 - - - - - - - 0.926 - - pyrophosphatase (inorganic) 2 [Source:HGNC Symbol;Acc:HGNC:28883]
62. CHD4 ENSGALG00000013565 25695 0.913 - - - - - - - 0.913 - - chromodomain helicase DNA binding protein 4
63. Sep-02_1 Sep-02_1 19203 0.909 - - - - - - - 0.909 - -
64. ENSGALG00000017396 ENSGALG00000017396 9028 0.907 - - - - - - - 0.907 - -
65. FAM98A ENSGALG00000010428 9585 0.9 - - - - - - - 0.900 - - family with sequence similarity 98 member A [Source:NCBI gene;Acc:421458]
66. LRPPRC ENSGALG00000009967 17091 0.898 - - - - - - - 0.898 - - leucine rich pentatricopeptide repeat containing [Source:HGNC Symbol;Acc:HGNC:15714]
67. TNFAIP8L1 ENSGALG00000004266 12611 0.897 - - - - - - - 0.897 - - TNF alpha induced protein 8 like 1 [Source:NCBI gene;Acc:420162]
68. YME1L1 ENSGALG00000007492 8652 0.895 - - - - - - 0.895 - - - YME1 like 1 ATPase [Source:NCBI gene;Acc:428418]
69. CDC42EP4 ENSGALG00000023364 9240 0.89 - - - - - - - 0.890 - - CDC42 effector protein 4 [Source:HGNC Symbol;Acc:HGNC:17147]
70. FEN1 ENSGALG00000033781 16551 0.89 - - - - - - 0.890 - - - flap structure-specific endonuclease 1 [Source:NCBI gene;Acc:769677]
71. ZOV3 ZOV3 3267 0.884 - - - - - - - 0.884 - -
72. LIN28B ENSGALG00000026761 13314 0.868 - - - - - - 0.868 - - - lin-28 homolog B [Source:NCBI gene;Acc:421786]
73. TIMM13 ENSGALG00000028937 32013 0.865 - - - - - - 0.865 - - - translocase of inner mitochondrial membrane 13 [Source:NCBI gene;Acc:100859352]
74. PNRC2 ENSGALG00000004122 19228 0.864 - - - - - - 0.864 - - - proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
75. MARK3 ENSGALG00000011505 14846 0.859 - - - - - - 0.859 - - - microtubule affinity regulating kinase 3 [Source:HGNC Symbol;Acc:HGNC:6897]
76. GBAS 18453 0.857 - - - - - - 0.857 - - - glioblastoma amplified sequence
77. ENSGALG00000023609 ENSGALG00000023609 6933 0.857 - - - - - - - 0.857 - -
78. TSPAN6 ENSGALG00000006808 20063 0.855 - - - - - - 0.855 - - - tetraspanin 6 [Source:NCBI gene;Acc:422262]
79. PDS5A ENSGALG00000014286 13077 0.852 - - - - - - 0.852 - - - PDS5 cohesin associated factor A [Source:NCBI gene;Acc:422787]
80. ZC3H6 ENSGALG00000008269 10353 0.85 - - - - - - 0.850 - - - zinc finger CCCH-type containing 6 [Source:NCBI gene;Acc:421230]
81. ATP6V1G1 ENSGALG00000007190 82534 0.848 - - - - - - - 0.848 - - ATPase H+ transporting V1 subunit G1 [Source:NCBI gene;Acc:417249]
82. MAD2L1 ENSGALG00000011967 16125 0.848 - - - - - - 0.848 - - - mitotic arrest deficient 2 like 1 [Source:NCBI gene;Acc:422675]
83. PSAP ENSGALG00000004769 14759 0.847 - - - - - - 0.847 - - - prosaposin [Source:NCBI gene;Acc:395602]
84. TSSC4 ENSGALG00000006530 10413 0.84 - - - - - - 0.840 - - - tumor suppressing subtransferable candidate 4 [Source:NCBI gene;Acc:423092]
85. GYG1 ENSGALG00000035535 6311 0.837 - - - - - - 0.837 - - - glycogenin 1 [Source:NCBI gene;Acc:425050]
86. ENSGALG00000014375 ENSGALG00000014375 4741 0.831 - - - - - - 0.831 - - -
87. MAPK6 ENSGALG00000031448 28384 0.83 - - - - - - - 0.830 - - mitogen-activated protein kinase 6 [Source:NCBI gene;Acc:415419]
88. ATXN2 ENSGALG00000004625 6306 0.824 - - - - - - 0.824 - - - ataxin 2 [Source:HGNC Symbol;Acc:HGNC:10555]
89. HSF2 ENSGALG00000038420 5259 0.822 - - - - - - 0.822 - - - heat shock transcription factor 2 [Source:NCBI gene;Acc:421724]
90. GRAMD4 ENSGALG00000034274 3826 0.817 - - - - - - 0.817 - - - GRAM domain containing 4 [Source:HGNC Symbol;Acc:HGNC:29113]
91. GMNN ENSGALG00000013626 15838 0.815 - - - - - - 0.815 - - - geminin, DNA replication inhibitor [Source:NCBI gene;Acc:421004]
92. EIF3L ENSGALG00000012296 42627 0.812 - - - - - - 0.812 - - - eukaryotic translation initiation factor 3 subunit L [Source:NCBI gene;Acc:418033]
93. STX12 ENSGALG00000000723 9703 0.807 - - - - - - 0.807 - - - syntaxin 12 [Source:HGNC Symbol;Acc:HGNC:11430]
94. DR1 ENSGALG00000005858 8016 0.807 - - - - - - 0.807 - - - down-regulator of transcription 1 [Source:NCBI gene;Acc:424496]
95. VPS36 ENSGALG00000017026 3658 0.806 - - - - - - 0.806 - - - vacuolar protein sorting 36 homolog [Source:HGNC Symbol;Acc:HGNC:20312]
96. DNAJB11 ENSGALG00000006564 9353 0.804 - - - - - - 0.804 - - - DnaJ heat shock protein family (Hsp40) member B11
97. UBR4 ENSGALG00000030563 5225 0.803 - - - - - - 0.803 - - - ubiquitin protein ligase E3 component n-recognin 4 [Source:HGNC Symbol;Acc:HGNC:30313]
98. KIF3A ENSGALG00000006860 6209 0.801 - - - - - - 0.801 - - - kinesin family member 3A [Source:NCBI gene;Acc:416332]
99. PTPLB PTPLB 13107 0.801 - - - - - - 0.801 - - -
100. COPS2 ENSGALG00000000404 8980 0.8 - - - - - - 0.800 - - - COP9 signalosome subunit 2 [Source:NCBI gene;Acc:430917]

There are 196 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA