Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PPIF

Gene Name Gene ID Reads Annotation
PPIF ENSGALG00000004809 5586 peptidylprolyl isomerase F [Source:NCBI gene;Acc:423723]











Genes with expression patterns similar to PPIF

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PPIF ENSGALG00000004809 5586 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 peptidylprolyl isomerase F [Source:NCBI gene;Acc:423723]
2. ENSGALG00000027854 ENSGALG00000027854 5007 1.932 - - - - - - 0.962 0.970 - -
3. ALDH4A1 ENSGALG00000042184 9432 1.872 - - - - - - 0.907 0.965 - - aldehyde dehydrogenase 4 family member A1 [Source:NCBI gene;Acc:419467]
4. SOD2 ENSGALG00000011661 13178 1.872 - - - - - - 0.939 0.933 - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
5. GTF2E1 ENSGALG00000042320 7712 1.737 - - - - - - 0.835 0.902 - - general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]
6. PSMG3 ENSGALG00000004203 11240 1.628 - - - - - - 0.922 - 0.706 - proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
7. CIRH1A CIRH1A 6975 1.419 - - 0.701 - - - - 0.718 - -
8. KCTD2 ENSGALG00000007934 15085 0.995 - - - - - - - 0.995 - - potassium channel tetramerization domain containing 2 [Source:NCBI gene;Acc:422116]
9. CZH9ORF100 CZH9ORF100 4268 0.995 - - - - - - - 0.995 - -
10. GTF2B ENSGALG00000006205 6950 0.994 - - - - - - - 0.994 - - general transcription factor IIB [Source:HGNC Symbol;Acc:HGNC:4648]
11. WDR53 ENSGALG00000006395 4938 0.993 - - - - - - - 0.993 - - WD repeat domain 53 [Source:HGNC Symbol;Acc:HGNC:28786]
12. C1H12ORF23 C1H12ORF23 13234 0.986 - - - - - - - 0.986 - -
13. IMPACT ENSGALG00000015093 1334 0.98 - - - - - - 0.980 - - - impact RWD domain protein [Source:HGNC Symbol;Acc:HGNC:20387]
14. MED6 ENSGALG00000029743 9414 0.974 - - - - - - 0.974 - - - mediator complex subunit 6 [Source:NCBI gene;Acc:426282]
15. FOPNL ENSGALG00000006532 2922 0.973 - - - - - - - 0.973 - - FGFR1OP N-terminal like [Source:NCBI gene;Acc:416598]
16. XRCC2 ENSGALG00000026865 2214 0.973 - - - - - - - 0.973 - - X-ray repair cross complementing 2 [Source:HGNC Symbol;Acc:HGNC:12829]
17. RNF2 ENSGALG00000037219 2299 0.973 - - - - - - - 0.973 - - ring finger protein 2 [Source:HGNC Symbol;Acc:HGNC:10061]
18. XPNPEP3 ENSGALG00000012003 2253 0.973 - - - - - - - 0.973 - - X-prolyl aminopeptidase 3 [Source:HGNC Symbol;Acc:HGNC:28052]
19. EDEM2 ENSGALG00000003128 3338 0.973 - - - - - - - 0.973 - - ER degradation enhancing alpha-mannosidase like protein 2 [Source:HGNC Symbol;Acc:HGNC:15877]
20. RAD18 ENSGALG00000008368 7214 0.973 - - - - - - - 0.973 - - RAD18, E3 ubiquitin protein ligase [Source:NCBI gene;Acc:416114]
21. UBE4A ENSGALG00000031134 5851 0.973 - - - - - - - 0.973 - - ubiquitination factor E4A [Source:NCBI gene;Acc:419758]
22. ARL6IP4 ENSGALG00000003682 2467 0.973 - - - - - - - 0.973 - - ADP ribosylation factor like GTPase 6 interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:18076]
23. ATE1 ENSGALG00000009502 3751 0.972 - - - - - - 0.972 - - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
24. GPR180 ENSGALG00000016897 1545 0.972 - - - - - - - 0.972 - - G protein-coupled receptor 180 [Source:HGNC Symbol;Acc:HGNC:28899]
25. CDCA2 ENSGALG00000045842 2236 0.972 - - - - - - - 0.972 - - cell division cycle associated 2, transcript variant X3
26. SORD ENSGALG00000031408 2119 0.972 - - - - - - - 0.972 - - sorbitol dehydrogenase [Source:NCBI gene;Acc:415332]
27. TWISTNB ENSGALG00000010863 7563 0.972 - - - - - - - 0.972 - - TWIST neighbor [Source:NCBI gene;Acc:420603]
28. ROR1 ENSGALG00000011019 2155 0.972 - - - - - - - 0.972 - - receptor tyrosine kinase like orphan receptor 1 [Source:NCBI gene;Acc:395179]
29. ENSGALG00000023314 ENSGALG00000023314 6331 0.972 - - - - - - - 0.972 - -
30. OGG1 ENSGALG00000006651 1320 0.972 - - - - - - - 0.972 - - 8-oxoguanine DNA glycosylase [Source:NCBI gene;Acc:771001]
31. CDC26 ENSGALG00000026095 3491 0.971 - - - - - - - 0.971 - - cell division cycle 26 [Source:NCBI gene;Acc:417269]
32. RASSF2 ENSGALG00000030432 4822 0.971 - - - - - - - 0.971 - - Ras association domain family member 2 [Source:NCBI gene;Acc:419521]
33. CCDC12 ENSGALG00000005487 8190 0.971 - - - - - - - 0.971 - - coiled-coil domain containing 12 [Source:NCBI gene;Acc:420402]
34. RNF19A ENSGALG00000038772 380 0.971 - - - - - - - 0.971 - - ring finger protein 19A, RBR E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:13432]
35. MAMLD1 ENSGALG00000009098 1231 0.971 - - - - - - - 0.971 - - mastermind like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:2568]
36. H1F0 ENSGALG00000044240 1206 0.971 - - - - - - - 0.971 - - H1 histone family, member 0 [Source:NCBI gene;Acc:693250]
37. MYL2 ENSGALG00000004582 2245 0.971 - - - - - - - 0.971 - - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
38. NARG2 NARG2 2294 0.971 - - - - - - - 0.971 - -
39. H2AFY_1 ENSGALG00000040141 4895 0.971 - - - - - - 0.971 - - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
40. EMCN EMCN 2637 0.97 - - - - - - - 0.970 - -
41. MPP7 ENSGALG00000007408 2485 0.97 - - - - - - - 0.970 - - membrane palmitoylated protein 7 [Source:HGNC Symbol;Acc:HGNC:26542]
42. MSRA ENSGALG00000028032 2607 0.97 - - - - - - 0.970 - - - methionine sulfoxide reductase A [Source:HGNC Symbol;Acc:HGNC:7377]
43. ODF2 ENSGALG00000004767 3972 0.969 - - - - - - - 0.969 - - outer dense fiber of sperm tails 2 [Source:NCBI gene;Acc:417213]
44. RBBP6 ENSGALG00000006043 9708 0.969 - - - - - - 0.969 - - - RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
45. HSPA14 ENSGALG00000035201 7372 0.967 - - - - - - - 0.967 - - heat shock protein family A (Hsp70) member 14
46. RBM27 ENSGALG00000007516 3909 0.965 - - - - - - - 0.965 - - RNA binding motif protein 27, transcript variant X3
47. NIPSNAP3L ENSGALG00000027334 7514 0.965 - - - - - - - 0.965 - - nipsnap homolog 3-like
48. TRABD ENSGALG00000030705 6577 0.965 - - - - - - - 0.965 - - TraB domain containing [Source:NCBI gene;Acc:417746]
49. ABCD3 ENSGALG00000005647 4844 0.965 - - - - - - 0.965 - - - ATP binding cassette subfamily D member 3 [Source:NCBI gene;Acc:424487]
50. TSPO2 ENSGALG00000003212 5141 0.963 - - - - - - - 0.963 - - translocator protein 2 [Source:HGNC Symbol;Acc:HGNC:21256]
51. AKAP7 ENSGALG00000029794 3287 0.963 - - - - - - 0.963 - - - A-kinase anchoring protein 7 [Source:HGNC Symbol;Acc:HGNC:377]
52. E2F6 ENSGALG00000016454 4747 0.963 - - - - - - 0.963 - - - E2F transcription factor 6 [Source:NCBI gene;Acc:421943]
53. USP20 ENSGALG00000041104 3186 0.963 - - - - - - - 0.963 - - ubiquitin specific peptidase 20 [Source:HGNC Symbol;Acc:HGNC:12619]
54. THOC2 ENSGALG00000008507 9501 0.962 - - - - - - 0.962 - - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
55. MYST2 MYST2 8078 0.961 - - - - - - 0.961 - - -
56. RILPL2 ENSGALG00000003321 5632 0.961 - - - - - - 0.961 - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
57. LEPROTL1 ENSGALG00000024482 4251 0.96 - - - - - - 0.960 - - - leptin receptor overlapping transcript-like 1
58. LMNB2 ENSGALG00000000470 4364 0.96 - - - - - - 0.960 - - - lamin B2 [Source:NCBI gene;Acc:396222]
59. INTS10 ENSGALG00000010130 6320 0.959 - - - - - - 0.959 - - - integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
60. IRAK2 ENSGALG00000008407 5934 0.959 - - - - - - 0.959 - - - interleukin 1 receptor associated kinase 2 [Source:NCBI gene;Acc:416118]
61. EI24 ENSGALG00000038097 24081 0.958 - - - - - - 0.958 - - - EI24, autophagy associated transmembrane protein [Source:NCBI gene;Acc:419711]
62. PHKG1 ENSGALG00000002485 15214 0.958 - - - - - - - 0.958 - - phosphorylase kinase catalytic subunit gamma 1 [Source:NCBI gene;Acc:417543]
63. LACTB2 ENSGALG00000038745 3460 0.957 - - - - - - 0.957 - - - lactamase beta 2 [Source:NCBI gene;Acc:420178]
64. AP2B1 ENSGALG00000042125 13229 0.957 - - - - - - 0.957 - - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
65. OGFOD1 6926 0.957 - - - - - - 0.957 - - - 2-oxoglutarate and iron dependent oxygenase domain containing 1
66. MTFR1 ENSGALG00000038385 9419 0.954 - - - - - - - 0.954 - - mitochondrial fission regulator 1 [Source:NCBI gene;Acc:395222]
67. NDUFA9 ENSGALG00000017282 14358 0.953 - - - - - - 0.953 - - - NADH:ubiquinone oxidoreductase subunit A9 [Source:NCBI gene;Acc:419039]
68. ARNT2 ENSGALG00000006445 7050 0.952 - - - - - - 0.952 - - - aryl hydrocarbon receptor nuclear translocator 2 [Source:HGNC Symbol;Acc:HGNC:16876]
69. SEC22B ENSGALG00000039704 16080 0.952 - - - - - - - 0.952 - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
70. BFAR ENSGALG00000003111 1778 0.952 - - - - - - 0.952 - - - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
71. C26H6ORF125 ENSGALG00000002881 15827 0.951 - - - - - - - 0.951 - - chromosome 26 open reading frame, human C6orf125 [Source:NCBI gene;Acc:419909]
72. DISP1 3281 0.951 - - - - - - 0.951 - - - dispatched RND transporter family member 1, transcript variant X3
73. RBM12B ENSGALG00000035129 4314 0.95 - - - - - - 0.950 - - - RNA binding motif protein 12B [Source:NCBI gene;Acc:420223]
74. HACE1 ENSGALG00000015415 1194 0.95 - - - - - - 0.950 - - - HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421788]
75. MOB2 ENSGALG00000030499 3658 0.95 - - - - - - 0.950 - - - MOB kinase activator 2 [Source:HGNC Symbol;Acc:HGNC:24904]
76. METTL11A METTL11A 11876 0.95 - - - - - - 0.950 - - -
77. PNO1 ENSGALG00000009093 11153 0.948 - - - - - - 0.948 - - - partner of NOB1 homolog [Source:NCBI gene;Acc:769547]
78. NDUFB8 ENSGALG00000005704 5781 0.948 - - - - - - 0.948 - - - NADH:ubiquinone oxidoreductase subunit B8 [Source:NCBI gene;Acc:423763]
79. CAMKK2 ENSGALG00000040131 2795 0.948 - - - - - - 0.948 - - - calcium/calmodulin dependent protein kinase kinase 2, transcript variant X9
80. TM9SF3 ENSGALG00000005534 15290 0.947 - - - - - - 0.947 - - - transmembrane 9 superfamily member 3
81. XRN1 ENSGALG00000002706 4014 0.947 - - - - - - 0.947 - - - 5'-3' exoribonuclease 1 [Source:HGNC Symbol;Acc:HGNC:30654]
82. DNA2 ENSGALG00000004037 5426 0.947 - - - - - - 0.947 - - - DNA replication helicase/nuclease 2 [Source:NCBI gene;Acc:423688]
83. ATN1 ENSGALG00000014554 3270 0.947 - - - - - - 0.947 - - - atrophin 1 [Source:HGNC Symbol;Acc:HGNC:3033]
84. SIRT1 ENSGALG00000002761 9028 0.946 - - - - - - 0.946 - - - sirtuin 1 [Source:NCBI gene;Acc:423646]
85. CLCN3 ENSGALG00000009674 3704 0.945 - - - - - - 0.945 - - - chloride voltage-gated channel 3 [Source:HGNC Symbol;Acc:HGNC:2021]
86. PPP3R1 ENSGALG00000023648 3417 0.945 - - - - - - 0.945 - - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
87. MRE11A MRE11A 5754 0.945 - - - - - - 0.945 - - -
88. AK6 ENSGALG00000020534 4791 0.945 - - - - - - 0.945 - - - adenylate kinase 6 [Source:NCBI gene;Acc:425215]
89. ARHGAP29 ENSGALG00000005683 3622 0.945 - - - - - - 0.945 - - - Rho GTPase activating protein 29 [Source:NCBI gene;Acc:424488]
90. SHQ1 ENSGALG00000007798 1982 0.944 - - - - - - 0.944 - - - SHQ1, H/ACA ribonucleoprotein assembly factor [Source:HGNC Symbol;Acc:HGNC:25543]
91. POLR3E ENSGALG00000007008 4010 0.944 - - - - - - 0.944 - - - RNA polymerase III subunit E [Source:HGNC Symbol;Acc:HGNC:30347]
92. EIF4G3 ENSGALG00000010084 5881 0.944 - - - - - - 0.944 - - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
93. CETN2 ENSGALG00000007510 1688 0.944 - - - - - - 0.944 - - - centrin 2 [Source:NCBI gene;Acc:422303]
94. KLHL29 ENSGALG00000016495 582 0.944 - - - - - - 0.944 - - - kelch like family member 29 [Source:HGNC Symbol;Acc:HGNC:29404]
95. SDF4 ENSGALG00000001872 6382 0.943 - - - - - - 0.943 - - - stromal cell derived factor 4 [Source:NCBI gene;Acc:419423]
96. SLC1A1 ENSGALG00000010187 637 0.943 - - - - - - 0.943 - - - solute carrier family 1 member 1 [Source:HGNC Symbol;Acc:HGNC:10939]
97. ENSGALG00000002923 ENSGALG00000002923 2233 0.943 - - - - - - 0.943 - - -
98. RRN3 ENSGALG00000041989 3934 0.943 - - - - - - 0.943 - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
99. POPDC3 ENSGALG00000027420 700 0.943 - - - - - - 0.943 - - - popeye domain containing 3 [Source:NCBI gene;Acc:395434]
100. DNAJA3 ENSGALG00000007821 3963 0.943 - - - - - - 0.943 - - - DnaJ heat shock protein family (Hsp40) member A3 [Source:HGNC Symbol;Acc:HGNC:11808]

There are 164 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA