Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PPIE

Gene Name Gene ID Reads Annotation
PPIE ENSGALG00000013383 3923 peptidylprolyl isomerase E [Source:HGNC Symbol;Acc:HGNC:9258]











Genes with expression patterns similar to PPIE

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PPIE ENSGALG00000013383 3923 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 peptidylprolyl isomerase E [Source:HGNC Symbol;Acc:HGNC:9258]
2. TMEM43 ENSGALG00000006345 2284 1.551 - - - - - - 0.803 0.748 - - transmembrane protein 43
3. FAM76B ENSGALG00000017202 688 1.49 - - - - - - 0.727 0.763 - - family with sequence similarity 76 member B [Source:HGNC Symbol;Acc:HGNC:28492]
4. DEPDC5 ENSGALG00000006766 1592 1.468 - - - - - - 0.719 0.749 - - DEP domain containing 5, transcript variant X6
5. WDSUB1 ENSGALG00000012574 2038 0.876 - - - - - - - 0.876 - - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
6. SLC25A36 ENSGALG00000005283 4221 0.855 - - - - - - 0.855 - - - solute carrier family 25 member 36 [Source:NCBI gene;Acc:424817]
7. CSTB ENSGALG00000014410 7346 0.854 - - - - - - - 0.854 - - cystatin B [Source:NCBI gene;Acc:418267]
8. ME1 ENSGALG00000015849 1169 0.834 - - - - - - - 0.834 - - malic enzyme 1 [Source:NCBI gene;Acc:374189]
9. FBXO21 ENSGALG00000008201 2608 0.827 - - - - - - - 0.827 - - F-box protein 21 [Source:HGNC Symbol;Acc:HGNC:13592]
10. RB1CC1 ENSGALG00000015259 4211 0.827 - - - - - - 0.827 - - - RB1 inducible coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:15574]
11. AMACR ENSGALG00000003326 2657 0.824 - - - - - - 0.824 - - - alpha-methylacyl-CoA racemase [Source:NCBI gene;Acc:427429]
12. PCIF1 ENSGALG00000023547 867 0.82 - - - - - - - 0.820 - - PDX1 C-terminal inhibiting factor 1 [Source:HGNC Symbol;Acc:HGNC:16200]
13. CLPX ENSGALG00000007289 6348 0.817 - - - - - - 0.817 - - - caseinolytic mitochondrial matrix peptidase chaperone subunit [Source:NCBI gene;Acc:415527]
14. SLC35B1 ENSGALG00000035057 10683 0.808 - - 0.808 - - - - - - - solute carrier family 35 member B1 [Source:NCBI gene;Acc:395185]
15. ABCC1 ENSGALG00000006646 2596 0.807 - - - - - - - 0.807 - - ATP binding cassette subfamily C member 1 [Source:NCBI gene;Acc:395416]
16. PTX3 ENSGALG00000028284 2984 0.807 - - - - - - 0.807 - - - pentraxin 3 [Source:NCBI gene;Acc:548626]
17. CDK5RAP1 ENSGALG00000006738 2628 0.807 - - - - - - - 0.807 - - CDK5 regulatory subunit associated protein 1 [Source:HGNC Symbol;Acc:HGNC:15880]
18. CACNA2D2 ENSGALG00000038242 2078 0.803 - - - - - - - 0.803 - - calcium voltage-gated channel auxiliary subunit alpha2delta 2 [Source:HGNC Symbol;Acc:HGNC:1400]
19. gga-mir-6587 ENSGALG00000026386 9441 0.803 - - - - - - 0.803 - - - gga-mir-6587 [Source:miRBase;Acc:MI0022407]
20. TBC1D15 ENSGALG00000010190 4417 0.799 - - - - - - - 0.799 - - TBC1 domain family member 15 [Source:NCBI gene;Acc:417857]
21. USP8 ENSGALG00000005894 4499 0.798 - - - - - - - 0.798 - - ubiquitin specific peptidase 8 [Source:HGNC Symbol;Acc:HGNC:12631]
22. TIRAP ENSGALG00000040224 2578 0.797 - - - - - - - 0.797 - - TIR domain containing adaptor protein [Source:NCBI gene;Acc:419715]
23. PTPRN2 ENSGALG00000030054 947 0.796 - - - - - - 0.796 - - - protein tyrosine phosphatase, receptor type N2 [Source:HGNC Symbol;Acc:HGNC:9677]
24. LRRC28 ENSGALG00000007057 2170 0.795 - - - - - - - 0.795 - - leucine rich repeat containing 28 [Source:NCBI gene;Acc:415512]
25. BCLAF1 ENSGALG00000013935 7596 0.791 - - - - - - 0.791 - - - BCL2 associated transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:16863]
26. MTDH ENSGALG00000034050 9525 0.791 - - - - - - - 0.791 - - metadherin [Source:HGNC Symbol;Acc:HGNC:29608]
27. TIMM13 ENSGALG00000028937 32013 0.79 - - - - - - - 0.790 - - translocase of inner mitochondrial membrane 13 [Source:NCBI gene;Acc:100859352]
28. TBCK ENSGALG00000010564 1546 0.788 - - - - - - 0.788 - - - TBC1 domain containing kinase [Source:NCBI gene;Acc:422534]
29. FKBP7 ENSGALG00000009149 6742 0.788 - - - - - - 0.788 - - - FK506 binding protein 7 [Source:HGNC Symbol;Acc:HGNC:3723]
30. SCARF2 ENSGALG00000034560 6945 0.787 - - - - - - - 0.787 - - scavenger receptor class F member 2 [Source:HGNC Symbol;Acc:HGNC:19869]
31. ARL13B ENSGALG00000015412 2968 0.786 - - - - - - - 0.786 - - ADP ribosylation factor like GTPase 13B [Source:HGNC Symbol;Acc:HGNC:25419]
32. TBK1 ENSGALG00000009840 1650 0.784 - - - - - - 0.784 - - - TANK binding kinase 1 [Source:NCBI gene;Acc:417825]
33. LRIG3 ENSGALG00000009755 6655 0.782 - - - - - - 0.782 - - - leucine rich repeats and immunoglobulin like domains 3 [Source:NCBI gene;Acc:417813]
34. FAM107B ENSGALG00000033226 1539 0.78 - - - - - - 0.780 - - - family with sequence similarity 107 member B [Source:HGNC Symbol;Acc:HGNC:23726]
35. MRPL38 ENSGALG00000002194 6648 0.779 - - - - - - 0.779 - - - mitochondrial ribosomal protein L38 [Source:NCBI gene;Acc:770172]
36. EXOSC3 ENSGALG00000002426 7255 0.778 - - - - - - 0.778 - - - exosome component 3 [Source:NCBI gene;Acc:423626]
37. MRS2 ENSGALG00000040084 454 0.775 - - - - - - - 0.775 - - MRS2, magnesium transporter [Source:HGNC Symbol;Acc:HGNC:13785]
38. WDR5 ENSGALG00000002659 13008 0.775 - - 0.775 - - - - - - - WD repeat domain 5 [Source:NCBI gene;Acc:417144]
39. MPRIP ENSGALG00000004798 6700 0.773 - - - - - - - 0.773 - - myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
40. CRY2 ENSGALG00000008436 1732 0.771 - - - - - - 0.771 - - - cryptochrome circadian regulator 2 [Source:NCBI gene;Acc:374092]
41. WBSCR22 6082 0.769 - - - - - - - 0.769 - - Williams-Beuren syndrome chromosome region 22
42. SEMA4B ENSGALG00000008297 11202 0.768 - - - - - - - 0.768 - - semaphorin 4B [Source:HGNC Symbol;Acc:HGNC:10730]
43. TWISTNB ENSGALG00000010863 7563 0.768 - - - - - - 0.768 - - - TWIST neighbor [Source:NCBI gene;Acc:420603]
44. UBE2E1 ENSGALG00000011286 5483 0.767 - - - - - - - 0.767 - - ubiquitin conjugating enzyme E2 E1 [Source:HGNC Symbol;Acc:HGNC:12477]
45. TFDP2 ENSGALG00000025759 13407 0.766 - - - - - - - 0.766 - - transcription factor Dp-2 [Source:NCBI gene;Acc:424780]
46. SLC39A13 ENSGALG00000008122 2003 0.765 - - - - - - - 0.765 - - solute carrier family 39 member 13 [Source:NCBI gene;Acc:423183]
47. PMP22 ENSGALG00000031425 5358 0.765 - - - - - - 0.765 - - - peripheral myelin protein 22 [Source:NCBI gene;Acc:417327]
48. NMI ENSGALG00000012480 2172 0.765 - - - - - - - 0.765 - - N-myc and STAT interactor [Source:HGNC Symbol;Acc:HGNC:7854]
49. MGP ENSGALG00000011740 978 0.764 - - - - - - - 0.764 - - matrix Gla protein [Source:NCBI gene;Acc:395912]
50. HIVEP2 ENSGALG00000013795 269 0.763 - - - - - - 0.763 - - - human immunodeficiency virus type I enhancer binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4921]
51. ARHGEF6 ENSGALG00000006439 5275 0.761 - - - - - - 0.761 - - - Rac/Cdc42 guanine nucleotide exchange factor 6 [Source:NCBI gene;Acc:422247]
52. BTG2 ENSGALG00000026858 6716 0.76 - - - - - - 0.760 - - - BTG anti-proliferation factor 2 [Source:HGNC Symbol;Acc:HGNC:1131]
53. CDC25A ENSGALG00000038469 2199 0.76 - - - - - - 0.760 - - - cell division cycle 25A [Source:NCBI gene;Acc:420375]
54. KIAA0355 ENSGALG00000004949 4352 0.76 - - - - - - 0.760 - - - KIAA0355 [Source:HGNC Symbol;Acc:HGNC:29016]
55. SMG6 ENSGALG00000003108 5342 0.759 - - - - - - 0.759 - - - SMG6, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:17809]
56. NSUN2 ENSGALG00000013064 2005 0.758 - - - - - - 0.758 - - - NOP2/Sun RNA methyltransferase family member 2 [Source:NCBI gene;Acc:420938]
57. GTF3C1 ENSGALG00000007387 5788 0.757 - - - - - - - 0.757 - - general transcription factor IIIC subunit 1 [Source:HGNC Symbol;Acc:HGNC:4664]
58. FAM195A 4642 0.757 - - - - - - 0.757 - - - family with sequence similarity 195, member A
59. PHTF2 ENSGALG00000008335 722 0.756 - - - - - - 0.756 - - - putative homeodomain transcription factor 2 [Source:NCBI gene;Acc:417728]
60. KIAA1324L ENSGALG00000030324 1695 0.756 - - - - - - 0.756 - - - KIAA1324 like [Source:HGNC Symbol;Acc:HGNC:21945]
61. ENSGALG00000024395 ENSGALG00000024395 1855 0.754 - - - - - - - 0.754 - -
62. NAA30 ENSGALG00000012098 4681 0.753 - - - - - - 0.753 - - - N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
63. TRAM2 ENSGALG00000016673 438 0.753 - - - - - - 0.753 - - - translocation associated membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:16855]
64. COQ10B ENSGALG00000038440 735 0.753 - - - - - - - 0.753 - - coenzyme Q10B [Source:HGNC Symbol;Acc:HGNC:25819]
65. FTSJ3 ENSGALG00000032993 8929 0.753 - - - - - - 0.753 - - - FtsJ RNA methyltransferase homolog 3 [Source:NCBI gene;Acc:419943]
66. MAU2 ENSGALG00000002969 10604 0.752 - - - - - - - 0.752 - - MAU2 sister chromatid cohesion factor [Source:HGNC Symbol;Acc:HGNC:29140]
67. CPT1A ENSGALG00000007077 3199 0.752 - - - - - - 0.752 - - - carnitine palmitoyltransferase 1A [Source:NCBI gene;Acc:423118]
68. RPAP3 ENSGALG00000009743 3380 0.751 - - - - - - 0.751 - - - RNA polymerase II associated protein 3 [Source:NCBI gene;Acc:417811]
69. KDELC2 ENSGALG00000017158 479 0.751 - - - - - - 0.751 - - - KDEL motif containing 2 [Source:HGNC Symbol;Acc:HGNC:28496]
70. MRPL50 ENSGALG00000015543 11649 0.75 - - - - - - - 0.750 - - mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
71. Sep-09 Sep-09 4723 0.749 - - - - - - - 0.749 - -
72. C11orf24 ENSGALG00000020488 4069 0.749 - - - - - - - 0.749 - - chromosome 11 open reading frame 24, transcript variant X10
73. CFI ENSGALG00000012126 20 0.748 - - - - - - - 0.748 - - complement factor I [Source:NCBI gene;Acc:428773]
74. ENSGALG00000004643 ENSGALG00000004643 2297 0.748 - - - - - - 0.748 - - -
75. PGPEP1 ENSGALG00000042080 169 0.745 - - - - - - - 0.745 - - pyroglutamyl-peptidase I [Source:HGNC Symbol;Acc:HGNC:13568]
76. ATPBD4 ATPBD4 1823 0.744 - - - - - - - 0.744 - -
77. LSM10 ENSGALG00000002127 2519 0.744 - - - - - - - 0.744 - - LSM10, U7 small nuclear RNA associated [Source:HGNC Symbol;Acc:HGNC:17562]
78. MRPL41 ENSGALG00000008746 3833 0.744 - - - - - - 0.744 - - - mitochondrial ribosomal protein L41 [Source:NCBI gene;Acc:417261]
79. HNRNPD ENSGALG00000011184 10686 0.743 - - 0.743 - - - - - - - heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
80. TMEM175 ENSGALG00000015368 3342 0.743 - - - - - - 0.743 - - - transmembrane protein 175 [Source:NCBI gene;Acc:427293]
81. LPCAT3 ENSGALG00000014570 7919 0.742 - - - - - - - 0.742 - - lysophosphatidylcholine acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:30244]
82. SLC39A9 ENSGALG00000009438 4838 0.742 - - - - - - 0.742 - - - solute carrier family 39 member 9 [Source:NCBI gene;Acc:423261]
83. FMO3 ENSGALG00000040573 26 0.741 - - - - - - - 0.741 - - flavin containing monooxygenase 3 [Source:NCBI gene;Acc:395267]
84. RSRC1 ENSGALG00000009669 5829 0.74 - - - - - - 0.740 - - - arginine and serine rich coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:24152]
85. MYCT1 ENSGALG00000013603 44 0.737 - - - - - - - 0.737 - - MYC target 1 [Source:HGNC Symbol;Acc:HGNC:23172]
86. MPDZ ENSGALG00000005846 3179 0.737 - - - - - - 0.737 - - - multiple PDZ domain protein [Source:NCBI gene;Acc:427360]
87. KIF21B ENSGALG00000034347 4144 0.737 - - - - - - 0.737 - - - kinesin family member 21B [Source:HGNC Symbol;Acc:HGNC:29442]
88. ZADH2 ENSGALG00000022882 11790 0.736 - - - - - - - 0.736 - - zinc binding alcohol dehydrogenase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:28697]
89. IFFO1 ENSGALG00000014443 2528 0.736 - - - - - - - 0.736 - - intermediate filament family orphan 1 [Source:HGNC Symbol;Acc:HGNC:24970]
90. ENOPH1 ENSGALG00000011178 1683 0.735 - - - - - - - 0.735 - - enolase-phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:24599]
91. GLCE ENSGALG00000028191 1170 0.734 - - - - - - - 0.734 - - glucuronic acid epimerase [Source:HGNC Symbol;Acc:HGNC:17855]
92. ABHD17C ENSGALG00000006420 2220 0.734 - - - - - - - 0.734 - - abhydrolase domain containing 17C [Source:NCBI gene;Acc:415479]
93. UBXN2B ENSGALG00000030585 2177 0.733 - - - - - - 0.733 - - - UBX domain protein 2B [Source:NCBI gene;Acc:421135]
94. SLC35F2 ENSGALG00000017167 1027 0.733 - - - - - - 0.733 - - - solute carrier family 35 member F2 [Source:HGNC Symbol;Acc:HGNC:23615]
95. HSCB ENSGALG00000005706 12953 0.732 - - - - - - - - - 0.732 HscB mitochondrial iron-sulfur cluster cochaperone [Source:HGNC Symbol;Acc:HGNC:28913]
96. SAP30 ENSGALG00000036252 2032 0.732 - - - - - - - 0.732 - - Sin3A associated protein 30 [Source:HGNC Symbol;Acc:HGNC:10532]
97. BORA ENSGALG00000016931 3660 0.731 - - - - - - 0.731 - - - bora, aurora kinase A activator [Source:NCBI gene;Acc:769298]
98. MMP15 ENSGALG00000038758 49988 0.731 - - - - - - 0.731 - - - matrix metallopeptidase 15 [Source:HGNC Symbol;Acc:HGNC:7161]
99. CDC2L1 CDC2L1 894 0.73 - - - - - - - 0.730 - -
100. CCDC82 925 0.73 - - - - - - - 0.730 - - coiled-coil domain containing 82, transcript variant X3

There are 97 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA