Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PPIB

Gene Name Gene ID Reads Annotation
PPIB ENSGALG00000002210 46778 peptidylprolyl isomerase B (cyclophilin B) [Source:NCBI gene;Acc:396447]











Genes with expression patterns similar to PPIB

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PPIB ENSGALG00000002210 46778 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 peptidylprolyl isomerase B (cyclophilin B) [Source:NCBI gene;Acc:396447]
2. STX2 ENSGALG00000002536 10438 1.621 - - - - - - 0.806 - - 0.815 syntaxin 2 [Source:NCBI gene;Acc:378895]
3. ACO2 ENSGALG00000011950 30387 1.593 - - - - - - 0.702 - - 0.891 aconitase 2 [Source:NCBI gene;Acc:374009]
4. PSMC2 ENSGALG00000008236 25980 1.58 - - - - - - 0.826 - - 0.754 proteasome 26S subunit, ATPase 2 [Source:NCBI gene;Acc:417716]
5. TMEM165 ENSGALG00000027886 5468 1.52 - - - - - - - - 0.707 0.813 transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]
6. PCNP ENSGALG00000015330 15750 1.519 - - - - - - 0.707 - - 0.812 PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
7. ARHGDIA ENSGALG00000008443 39103 1.503 - - - - 0.764 - - - - 0.739 Rho GDP dissociation inhibitor alpha [Source:NCBI gene;Acc:769231]
8. MT-ND6 MT-ND6 181659 1.489 0.755 0.734 - - - - - - - -
9. ENSGALG00000028649 ENSGALG00000028649 135970 1.471 0.769 0.702 - - - - - - - -
10. NDUFAB1 ENSGALG00000006073 40467 1.46 - - - - 0.742 - 0.718 - - - NADH:ubiquinone oxidoreductase subunit AB1 [Source:HGNC Symbol;Acc:HGNC:7694]
11. RPL12 ENSGALG00000008806 229862 0.902 - - - - - - 0.902 - - - ribosomal protein L12 [Source:NCBI gene;Acc:417264]
12. GOT2 ENSGALG00000002321 4961 0.888 - - - - - - - - - 0.888 glutamic-oxaloacetic transaminase 2 [Source:NCBI gene;Acc:396533]
13. COX5A ENSGALG00000014121 55281 0.882 - - - - - - - - - 0.882 cytochrome c oxidase subunit 5A [Source:HGNC Symbol;Acc:HGNC:2267]
14. TMEM115 ENSGALG00000026965 13050 0.874 - - - - - - - - - 0.874 transmembrane protein 115 [Source:HGNC Symbol;Acc:HGNC:30055]
15. CACHD1 ENSGALG00000011024 2036 0.872 - - - - - - - - - 0.872 cache domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29314]
16. CPD ENSGALG00000004295 8199 0.871 - - - - - - - - - 0.871 carboxypeptidase D [Source:HGNC Symbol;Acc:HGNC:2301]
17. THAP4 ENSGALG00000006283 1707 0.871 - - - - - - - - - 0.871 THAP domain containing 4 [Source:HGNC Symbol;Acc:HGNC:23187]
18. ENSGALG00000026433 ENSGALG00000026433 14463 0.869 - - - - - - - - - 0.869
19. SF3A3 ENSGALG00000001540 9664 0.868 - - - - - - - - - 0.868 splicing factor 3a subunit 3 [Source:HGNC Symbol;Acc:HGNC:10767]
20. RCC2 ENSGALG00000031684 28067 0.867 - - - - - - 0.867 - - - regulator of chromosome condensation 2 [Source:HGNC Symbol;Acc:HGNC:30297]
21. ATG16L1 ENSGALG00000001619 3562 0.866 - - - - - - - - - 0.866 autophagy related 16 like 1 [Source:HGNC Symbol;Acc:HGNC:21498]
22. GRK4 ENSGALG00000015645 1065 0.864 - - - - - - - - - 0.864 G protein-coupled receptor kinase 4 [Source:NCBI gene;Acc:422879]
23. SGSH ENSGALG00000007027 1115 0.864 - - - - - - - - - 0.864 N-sulfoglucosamine sulfohydrolase [Source:HGNC Symbol;Acc:HGNC:10818]
24. SLC39A13 ENSGALG00000008122 2003 0.862 - - - - - - - - - 0.862 solute carrier family 39 member 13 [Source:NCBI gene;Acc:423183]
25. UCHL3 ENSGALG00000016921 16208 0.862 - - - - - - - - - 0.862 ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
26. ZC3HC1 ENSGALG00000008003 2750 0.862 - - - - - - - - - 0.862 zinc finger C3HC-type containing 1 [Source:NCBI gene;Acc:416679]
27. ATP6V0C ENSGALG00000009229 125870 0.862 - - - - - - - - - 0.862 ATPase H+ transporting V0 subunit c [Source:NCBI gene;Acc:416753]
28. MPRIP ENSGALG00000004798 6700 0.861 - - - - - - - - - 0.861 myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
29. MIPEP ENSGALG00000017118 8666 0.86 - - - - - - - - - 0.860 mitochondrial intermediate peptidase [Source:HGNC Symbol;Acc:HGNC:7104]
30. RAMP2 ENSGALG00000024449 5860 0.857 - - - - - - - - - 0.857 receptor activity modifying protein 2 [Source:NCBI gene;Acc:420022]
31. PLA2G15 ENSGALG00000041787 762 0.856 - - - - - - - - - 0.856 phospholipase A2 group XV [Source:HGNC Symbol;Acc:HGNC:17163]
32. UQCR11 ENSGALG00000001096 25245 0.855 - - - - - - - - - 0.855 ubiquinol-cytochrome c reductase, complex III subunit XI [Source:NCBI gene;Acc:770135]
33. ARPC1B ENSGALG00000032588 2407 0.854 - - - - - - - - - 0.854 actin related protein 2/3 complex subunit 1B [Source:NCBI gene;Acc:416490]
34. ENSGALG00000005389 ENSGALG00000005389 553 0.854 - - - - - - - - - 0.854
35. FBXO25 ENSGALG00000016359 1547 0.854 - - - - - - - - - 0.854 F-box protein 25 [Source:HGNC Symbol;Acc:HGNC:13596]
36. FBXO21 ENSGALG00000008201 2608 0.853 - - - - - - - - - 0.853 F-box protein 21 [Source:HGNC Symbol;Acc:HGNC:13592]
37. TXNDC11 ENSGALG00000003154 2224 0.853 - - - - - - - - - 0.853 thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
38. PCLO 249 0.852 - - - - - - - - - 0.852 piccolo presynaptic cytomatrix protein
39. MRPL50 ENSGALG00000015543 11649 0.851 - - - - - - - - - 0.851 mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
40. PHF13 ENSGALG00000028148 1240 0.851 - - - - - - - - - 0.851 PHD finger protein 13 [Source:NCBI gene;Acc:101750144]
41. CPNE1 ENSGALG00000040856 610 0.851 - - - - - - - - - 0.851 copine 1 [Source:NCBI gene;Acc:419134]
42. RTN4R ENSGALG00000007732 1515 0.85 - - - - - - - - - 0.850 reticulon 4 receptor
43. CASKIN1 604 0.848 - - - - - - - - - 0.848 CASK interacting protein 1, transcript variant X4
44. CRYM ENSGALG00000002484 3558 0.848 - - - - - - - - - 0.848 crystallin mu [Source:HGNC Symbol;Acc:HGNC:2418]
45. ACAP2 ENSGALG00000007040 4182 0.847 - - - - - - - - - 0.847 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:NCBI gene;Acc:424895]
46. FASTKD3 ENSGALG00000033521 1186 0.847 - - - - - - - - - 0.847 FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
47. NEO1 ENSGALG00000001774 10165 0.846 - - - - - - - - - 0.846 neogenin 1 [Source:HGNC Symbol;Acc:HGNC:7754]
48. CLUH ENSGALG00000005854 2100 0.845 - - - - - - - - - 0.845 clustered mitochondria homolog [Source:HGNC Symbol;Acc:HGNC:29094]
49. CPNE2 ENSGALG00000001316 236 0.845 - - - - - - - - - 0.845 copine 2 [Source:NCBI gene;Acc:415646]
50. C26H6ORF89 C26H6ORF89 1826 0.845 - - - - - - - - - 0.845
51. ZNF6 ZNF6 138 0.844 - - - - - - - - - 0.844
52. HEXA ENSGALG00000043828 4789 0.844 - - - - - - - - - 0.844 hexosaminidase subunit alpha [Source:NCBI gene;Acc:415320]
53. GRTP1 ENSGALG00000016828 3145 0.844 - - - - - - - - - 0.844 growth hormone regulated TBC protein 1 [Source:HGNC Symbol;Acc:HGNC:20310]
54. CDH1-A CDH1-A 343 0.844 - - - - - - - - - 0.844
55. CDKN2AIP ENSGALG00000010661 1218 0.844 - - - - - - - - - 0.844 CDKN2A interacting protein [Source:HGNC Symbol;Acc:HGNC:24325]
56. PTX3 ENSGALG00000028284 2984 0.844 - - - - - - - - - 0.844 pentraxin 3 [Source:NCBI gene;Acc:548626]
57. INTS10 ENSGALG00000010130 6320 0.843 - - - - - - - - - 0.843 integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
58. TP53BP1 ENSGALG00000042201 708 0.843 - - - - - - - - - 0.843 tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11999]
59. FBLIM1 ENSGALG00000003636 1498 0.843 - - - - - - - - - 0.843 filamin binding LIM protein 1 [Source:HGNC Symbol;Acc:HGNC:24686]
60. ESRRG ENSGALG00000009645 2783 0.843 - - - - - - - - - 0.843 estrogen related receptor gamma [Source:NCBI gene;Acc:421357]
61. APBA3 ENSGALG00000000740 1249 0.843 - - - - - - - - - 0.843 amyloid beta precursor protein binding family A member 3 [Source:HGNC Symbol;Acc:HGNC:580]
62. CA2 ENSGALG00000030781 1723 0.843 - - - - - - - - - 0.843 carbonic anhydrase 2 [Source:NCBI gene;Acc:396257]
63. 5S_2 5S_2 58 0.843 - - - - - - - - - 0.843
64. ITGA9 ENSGALG00000029378 415 0.842 - - - - - - - - - 0.842 integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
65. AURKA ENSGALG00000007768 793 0.842 - - - - - - - - - 0.842 aurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]
66. CXADR ENSGALG00000015701 96 0.842 - - - - - - - - - 0.842 coxsackie virus and adenovirus receptor, transcript variant X2
67. HSPA12A ENSGALG00000009248 7783 0.842 - - - - - - - - - 0.842 heat shock protein family A (Hsp70) member 12A [Source:HGNC Symbol;Acc:HGNC:19022]
68. CCDC51 ENSGALG00000006465 1845 0.841 - - - - - - - - - 0.841 coiled-coil domain containing 51, transcript variant X1
69. IL10R2 IL10R2 72 0.841 - - - - - - - - - 0.841
70. FAM129A ENSGALG00000004812 269 0.841 - - - - - - - - - 0.841 family with sequence similarity 129 member A [Source:NCBI gene;Acc:424451]
71. PREX2 ENSGALG00000042354 134 0.841 - - - - - - - - - 0.841 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2
72. LRRN4 ENSGALG00000008815 481 0.84 - - - - - - - - - 0.840 leucine rich repeat neuronal 4 [Source:HGNC Symbol;Acc:HGNC:16208]
73. FAM190B FAM190B 165 0.84 - - - - - - - - - 0.840
74. PROM1 ENSGALG00000014496 2494 0.84 - - - - - - - - - 0.840 prominin 1 [Source:NCBI gene;Acc:422825]
75. C1orf198 ENSGALG00000026600 5651 0.84 - - - - - - - - - 0.840 chromosome 1 open reading frame 198 [Source:HGNC Symbol;Acc:HGNC:25900]
76. SYNGR2 ENSGALG00000027902 6953 0.84 - - - - - - - - - 0.840 Gallus gallus synaptogyrin 2 (SYNGR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318453]
77. SOX6 ENSGALG00000006074 102 0.839 - - - - - - - - - 0.839 Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]
78. MED24 ENSGALG00000013506 5403 0.839 - - - - - - - - - 0.839 mediator complex subunit 24 [Source:NCBI gene;Acc:426134]
79. HYAL3 ENSGALG00000029000 712 0.839 - - - - - - - - - 0.839 hyaluronoglucosaminidase 3 [Source:HGNC Symbol;Acc:HGNC:5322]
80. PTBP1 ENSGALG00000001962 66983 0.839 - - - - - - 0.839 - - - polypyrimidine tract binding protein 1 [Source:NCBI gene;Acc:420098]
81. ACAA2 ENSGALG00000031142 29220 0.838 - - - - - - 0.838 - - - acetyl-CoA acyltransferase 2 [Source:NCBI gene;Acc:426847]
82. GGA.31975 GGA.31975 8825 0.838 - - - - - - - - - 0.838
83. USP7 ENSGALG00000007307 2973 0.838 - - - - - - - - - 0.838 ubiquitin specific peptidase 7 [Source:NCBI gene;Acc:395126]
84. SLC2A3 SLC2A3 527 0.838 - - - - - - - - - 0.838
85. ODF2 ENSGALG00000004767 3972 0.837 - - - - - - - - - 0.837 outer dense fiber of sperm tails 2 [Source:NCBI gene;Acc:417213]
86. WDSUB1 ENSGALG00000012574 2038 0.837 - - - - - - - - - 0.837 WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
87. SSH1 ENSGALG00000004928 222 0.837 - - - - - - - - - 0.837 slingshot protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:30579]
88. TMEM9B ENSGALG00000005908 14074 0.837 - - - - - - - - - 0.837 TMEM9 domain family member B [Source:HGNC Symbol;Acc:HGNC:1168]
89. NARS ENSGALG00000040506 9506 0.837 - - - - - - - - - 0.837 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
90. PSMA3 ENSGALG00000012039 26539 0.837 - - - - - - - - - 0.837 proteasome subunit alpha 3 [Source:NCBI gene;Acc:423542]
91. C14orf80 C14orf80 1921 0.837 - - - - - - - - - 0.837
92. CPT2 ENSGALG00000010681 3211 0.836 - - - - - - - - - 0.836 carnitine palmitoyltransferase 2 [Source:NCBI gene;Acc:424649]
93. ITSN2 ENSGALG00000016504 651 0.836 - - - - - - - - - 0.836 intersectin 2 [Source:HGNC Symbol;Acc:HGNC:6184]
94. PM20D2 ENSGALG00000015779 1301 0.835 - - - - - - - - - 0.835 peptidase M20 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21408]
95. MGST1 ENSGALG00000013098 17632 0.835 - - - - - - 0.835 - - - microsomal glutathione S-transferase 1 [Source:NCBI gene;Acc:418178]
96. FBXO38 ENSGALG00000038627 2658 0.835 - - - - - - - - - 0.835 F-box protein 38 [Source:HGNC Symbol;Acc:HGNC:28844]
97. SMARCC1 ENSGALG00000032642 4842 0.835 - - - - - - - - - 0.835 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 [Source:HGNC Symbol;Acc:HGNC:11104]
98. ARHGAP21 ENSGALG00000007721 3961 0.834 - - - - - - - - - 0.834 Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
99. LOC426385 ENSGALG00000026301 2703 0.834 - - - - - - - - - 0.834 serine/threonine kinase 35-like, transcript variant X2
100. TMEM130 ENSGALG00000003569 949 0.833 - - - - - - - - - 0.833 transmembrane protein 130 [Source:HGNC Symbol;Acc:HGNC:25429]

There are 354 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA