Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PPFIBP1

Gene Name Gene ID Reads Annotation
PPFIBP1 ENSGALG00000014106 9864 PPFIA binding protein 1 [Source:NCBI gene;Acc:418219]











Genes with expression patterns similar to PPFIBP1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PPFIBP1 ENSGALG00000014106 9864 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PPFIA binding protein 1 [Source:NCBI gene;Acc:418219]
2. MRPL28 ENSGALG00000007473 19134 1.555 - - - - - - 0.733 0.822 - - mitochondrial ribosomal protein L28 [Source:NCBI gene;Acc:426121]
3. NID2 ENSGALG00000012394 6717 1.547 - - - - - - 0.721 0.826 - - nidogen 2 [Source:HGNC Symbol;Acc:HGNC:13389]
4. TNRC6A ENSGALG00000006068 9166 1.516 - - - - - - 0.706 0.810 - - trinucleotide repeat containing 6A [Source:HGNC Symbol;Acc:HGNC:11969]
5. MTO1 ENSGALG00000015923 4418 0.961 - - - - - - - 0.961 - - mitochondrial tRNA translation optimization 1 [Source:NCBI gene;Acc:772297]
6. OCC-1 OCC-1 1887 0.961 - - - - - - - 0.961 - -
7. gga-mir-1610 ENSGALG00000025580 3985 0.96 - - - - - - - 0.960 - - gga-mir-1610 [Source:miRBase;Acc:MI0007338]
8. ENSGALG00000007574 ENSGALG00000007574 7695 0.955 - - - - - - - 0.955 - -
9. KMT2C 6306 0.954 - - - - - - - 0.954 - - lysine methyltransferase 2C, transcript variant X14
10. PXDN ENSGALG00000016377 4255 0.94 - - - - - - - 0.940 - - peroxidasin [Source:HGNC Symbol;Acc:HGNC:14966]
11. SERBP1 ENSGALG00000011229 30489 0.93 - - - - - - - 0.930 - - SERPINE1 mRNA binding protein 1 [Source:NCBI gene;Acc:424706]
12. RND3 ENSGALG00000026313 9271 0.912 - - - - - - - 0.912 - - Rho family GTPase 3 [Source:HGNC Symbol;Acc:HGNC:671]
13. ENSGALG00000020092 ENSGALG00000020092 3067 0.859 - - - - - - - 0.859 - -
14. MBNL2 ENSGALG00000016890 3162 0.857 - - - - - - - 0.857 - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
15. FGD5 ENSGALG00000008546 4031 0.852 - - - - - - - 0.852 - - FYVE, RhoGEF and PH domain containing 5 [Source:HGNC Symbol;Acc:HGNC:19117]
16. TYW3 ENSGALG00000032549 4869 0.852 - - - - - - - 0.852 - - tRNA-yW synthesizing protein 3 homolog [Source:NCBI gene;Acc:424720]
17. RABL5 RABL5 5264 0.846 - - - - - - - 0.846 - -
18. PTGES2 ENSGALG00000033760 11255 0.845 - - - - - - - 0.845 - - prostaglandin E synthase 2
19. NCS1 ENSGALG00000012710 1104 0.843 - - - - - - - 0.843 - - neuronal calcium sensor 1 [Source:NCBI gene;Acc:396336]
20. TOR1B TOR1B 197 0.843 - - - - - - - 0.843 - -
21. SLC26A8 ENSGALG00000040498 253 0.843 - - - - - - - 0.843 - - solute carrier family 26 member 8 [Source:HGNC Symbol;Acc:HGNC:14468]
22. YTHDF3 ENSGALG00000039774 170 0.843 - - - - - - - 0.843 - - YTH N6-methyladenosine RNA binding protein 3 [Source:NCBI gene;Acc:421145]
23. CAPN9 158 0.843 - - - - - - - 0.843 - - calpain 9
24. LOC420160 ENSGALG00000004252 188 0.843 - - - - - - - 0.843 - - cathepsin L1-like, transcript variant X3
25. CAPRIN2 1473 0.842 - - - - - - - 0.842 - - caprin family member 2, transcript variant X7
26. FTSJ2 FTSJ2 2951 0.842 - - - - - - - 0.842 - -
27. LIPA ENSGALG00000006378 4414 0.842 - - - - - - - 0.842 - - lipase A, lysosomal acid type [Source:HGNC Symbol;Acc:HGNC:6617]
28. FPGT ENSGALG00000026958 788 0.842 - - - - - - - 0.842 - - fucose-1-phosphate guanylyltransferase [Source:NCBI gene;Acc:100533998]
29. ENSGALG00000001591 ENSGALG00000001591 784 0.842 - - - - - - - 0.842 - -
30. NKX-6.2 NKX-6.2 1370 0.842 - - - - - - - 0.842 - -
31. RASGEF1B 2014 0.842 - - - - - - - 0.842 - - RasGEF domain family member 1B, transcript variant X8
32. WNK2 ENSGALG00000038850 4712 0.842 - - - - - - - 0.842 - - WNK lysine deficient protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:14542]
33. NR3C2 ENSGALG00000010035 603 0.842 - - - - - - - 0.842 - - nuclear receptor subfamily 3 group C member 2 [Source:NCBI gene;Acc:374131]
34. KPNA4 ENSGALG00000009549 3674 0.841 - - - - - - - 0.841 - - karyopherin subunit alpha 4 [Source:NCBI gene;Acc:425012]
35. VASH1 ENSGALG00000043036 1235 0.841 - - - - - - - 0.841 - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
36. SLX4 ENSGALG00000031841 1208 0.841 - - - - - - - 0.841 - - SLX4 structure-specific endonuclease subunit [Source:HGNC Symbol;Acc:HGNC:23845]
37. PLA2G7 ENSGALG00000016713 2100 0.84 - - - - - - - 0.840 - - phospholipase A2 group VII [Source:NCBI gene;Acc:395816]
38. SETD2 ENSGALG00000042051 2981 0.84 - - - - - - - 0.840 - - SET domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18420]
39. TBCE ENSGALG00000013950 3076 0.84 - - - - - - - 0.840 - - tubulin folding cofactor E
40. SALL4 ENSGALG00000041365 6760 0.839 - - - - - - 0.839 - - - spalt like transcription factor 4 [Source:NCBI gene;Acc:769286]
41. GNE ENSGALG00000015331 1577 0.838 - - - - - - - 0.838 - - glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase [Source:NCBI gene;Acc:427285]
42. GNB1L ENSGALG00000001925 1981 0.838 - - - - - - - 0.838 - - G protein subunit beta 1 like [Source:NCBI gene;Acc:416781]
43. SEMA3F ENSGALG00000029621 2079 0.838 - - - - - - - 0.838 - - semaphorin 3F [Source:NCBI gene;Acc:374109]
44. HIP1R ENSGALG00000031511 1981 0.838 - - - - - - - 0.838 - - huntingtin interacting protein 1 related [Source:NCBI gene;Acc:416836]
45. HMOX1 ENSGALG00000012550 1186 0.836 - - - - - - - 0.836 - - heme oxygenase 1 [Source:NCBI gene;Acc:396287]
46. AARSD1 ENSGALG00000002880 3068 0.836 - - - - - - - 0.836 - - Gallus gallus alanyl-tRNA synthetase domain containing 1 (AARSD1), mRNA. [Source:RefSeq mRNA;Acc:NM_001328355]
47. NPEPL1 ENSGALG00000007533 5908 0.835 - - - - - - - 0.835 - - aminopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:16244]
48. FNTA ENSGALG00000015397 3741 0.835 - - - - - - - 0.835 - - farnesyltransferase, CAAX box, alpha [Source:HGNC Symbol;Acc:HGNC:3782]
49. CHST2 ENSGALG00000034507 6172 0.835 - - - - - - - 0.835 - - carbohydrate sulfotransferase 2 [Source:HGNC Symbol;Acc:HGNC:1970]
50. C2CD2 ENSGALG00000016148 2734 0.833 - - - - - - - 0.833 - - C2 calcium dependent domain containing 2 [Source:HGNC Symbol;Acc:HGNC:1266]
51. ENSGALG00000005615 ENSGALG00000005615 4354 0.833 - - - - - - - 0.833 - -
52. C5orf63 C5orf63 3718 0.832 - - - - - - - 0.832 - -
53. TLN2 2295 0.831 - - - - - - - 0.831 - - talin 2, transcript variant X5
54. NFI1 NFI1 6210 0.831 - - - - - - 0.831 - - -
55. CXorf23 1582 0.831 - - - - - - - 0.831 - - chromosome X open reading frame 23, transcript variant X3
56. UTP23 ENSGALG00000032400 3601 0.831 - - - - - - - 0.831 - - UTP23, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:28224]
57. MAP4K5 ENSGALG00000012321 3036 0.83 - - - - - - - 0.830 - - mitogen-activated protein kinase kinase kinase kinase 5 [Source:HGNC Symbol;Acc:HGNC:6867]
58. PAM16 9684 0.83 - - - - - - - 0.830 - - presequence translocase associated motor 16 homolog, transcript variant X2
59. EXOSC1 ENSGALG00000039917 5259 0.829 - - - - - - - 0.829 - - exosome component 1 [Source:HGNC Symbol;Acc:HGNC:17286]
60. HVCN1 ENSGALG00000004562 2550 0.829 - - - - - - - 0.829 - - hydrogen voltage gated channel 1 [Source:NCBI gene;Acc:416871]
61. CABLES1 ENSGALG00000014998 1636 0.828 - - - - - - - 0.828 - - Cdk5 and Abl enzyme substrate 1 [Source:HGNC Symbol;Acc:HGNC:25097]
62. VPS26A ENSGALG00000004174 9198 0.825 - - - - - - - 0.825 - - VPS26, retromer complex component A [Source:HGNC Symbol;Acc:HGNC:12711]
63. DLGAP4 ENSGALG00000001046 6872 0.824 - - - - - - - 0.824 - - DLG associated protein 4 [Source:HGNC Symbol;Acc:HGNC:24476]
64. WDR82 ENSGALG00000025904 4783 0.824 - - - - - - - 0.824 - - WD repeat domain 82 [Source:NCBI gene;Acc:415942]
65. UBE2Q2 3861 0.824 - - - - - - - 0.824 - - ubiquitin conjugating enzyme E2 Q2, transcript variant X4
66. C1orf21 ENSGALG00000020922 4035 0.823 - - - - - - - 0.823 - - chromosome 1 open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:15494]
67. SART3 ENSGALG00000039472 4948 0.823 - - - - - - - 0.823 - - squamous cell carcinoma antigen recognized by T cells 3 [Source:HGNC Symbol;Acc:HGNC:16860]
68. POLDIP2 ENSGALG00000003211 11664 0.823 - - - - - - - 0.823 - - DNA polymerase delta interacting protein 2 [Source:NCBI gene;Acc:417565]
69. PCDH1 ENSGALG00000002553 2938 0.822 - - - - - - - 0.822 - - protocadherin 1 [Source:NCBI gene;Acc:416194]
70. FGD3 ENSGALG00000005237 4410 0.822 - - - - - - - 0.822 - - FYVE, RhoGEF and PH domain containing 3 [Source:HGNC Symbol;Acc:HGNC:16027]
71. ITCH ENSGALG00000040474 2646 0.819 - - - - - - - 0.819 - - itchy E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:13890]
72. CTSA ENSGALG00000006876 5380 0.819 - - - - - - - 0.819 - - cathepsin A [Source:NCBI gene;Acc:428163]
73. CPEB2 ENSGALG00000014516 1187 0.819 - - - - - - - 0.819 - - cytoplasmic polyadenylation element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:21745]
74. SMC4 ENSGALG00000009553 15715 0.818 - - - - - - 0.818 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
75. VMA21 ENSGALG00000009065 6432 0.818 - - - - - - 0.818 - - - VMA21, vacuolar ATPase assembly factor [Source:NCBI gene;Acc:422385]
76. MRPL10 ENSGALG00000014387 12386 0.818 - - - - - - - 0.818 - - mitochondrial ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:14055]
77. EMC1 ENSGALG00000003969 6876 0.818 - - - - - - - 0.818 - - ER membrane protein complex subunit 1 [Source:NCBI gene;Acc:419470]
78. FBN3 ENSGALG00000037625 23313 0.815 - - - - - - - 0.815 - - fibrillin 3 [Source:HGNC Symbol;Acc:HGNC:18794]
79. C10orf11 C10orf11 3087 0.812 - - - - - - - 0.812 - -
80. ADD1 ENSGALG00000015664 6828 0.811 - - - - - - 0.811 - - - adducin 1 [Source:NCBI gene;Acc:422882]
81. TAF12 ENSGALG00000000991 8709 0.81 - - - - - - - 0.810 - - TATA-box binding protein associated factor 12 [Source:NCBI gene;Acc:419585]
82. C1H12ORF23 C1H12ORF23 13234 0.809 - - - - - - 0.809 - - -
83. PCNT ENSGALG00000007021 6428 0.809 - - - - - - 0.809 - - - pericentrin [Source:HGNC Symbol;Acc:HGNC:16068]
84. TARS ENSGALG00000003288 12702 0.809 - - - - - - - 0.809 - - threonyl-tRNA synthetase [Source:NCBI gene;Acc:427427]
85. AKR1B10L3 ENSGALG00000019284 5869 0.808 - - - - - - - 0.808 - - aldo-keto reductase family 1 member B10-like 3
86. THOC2 ENSGALG00000008507 9501 0.807 - - - - - - - 0.807 - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
87. WDR45B ENSGALG00000001563 5870 0.806 - - - - - - - 0.806 - - WD repeat domain 45B [Source:NCBI gene;Acc:417339]
88. UBE2J2 ENSGALG00000001848 6527 0.805 - - - - - - - 0.805 - - ubiquitin conjugating enzyme E2 J2 [Source:HGNC Symbol;Acc:HGNC:19268]
89. CCDC12 ENSGALG00000005487 8190 0.803 - - - - - - 0.803 - - - coiled-coil domain containing 12 [Source:NCBI gene;Acc:420402]
90. METTL6 ENSGALG00000040665 4467 0.803 - - - - - - - 0.803 - - methyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:28343]
91. CCDC88C ENSGALG00000040156 6191 0.802 - - - - - - 0.802 - - - coiled-coil domain containing 88C [Source:HGNC Symbol;Acc:HGNC:19967]
92. CDC73 ENSGALG00000002469 4586 0.802 - - - - - - - 0.802 - - cell division cycle 73 [Source:NCBI gene;Acc:424356]
93. AP2A2 ENSGALG00000006799 13874 0.802 - - - - - - 0.802 - - - adaptor related protein complex 2 subunit alpha 2 [Source:NCBI gene;Acc:423102]
94. MTMR8 ENSGALG00000007590 6022 0.801 - - - - - - 0.801 - - - myotubularin related protein 8 [Source:NCBI gene;Acc:422312]
95. DERL1 ENSGALG00000033950 15074 0.8 - - - - - - 0.800 - - - derlin 1 [Source:NCBI gene;Acc:420350]
96. SSR3 ENSGALG00000028683 24334 0.8 - - - - - - 0.800 - - - signal sequence receptor subunit 3 [Source:NCBI gene;Acc:425027]
97. TMEM184C ENSGALG00000010019 7856 0.799 - - - - - - 0.799 - - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
98. NPM3 ENSGALG00000032329 21138 0.796 - - - - - - - 0.796 - - nucleophosmin/nucleoplasmin 3 [Source:HGNC Symbol;Acc:HGNC:7931]
99. EGLN1 ENSGALG00000041422 11032 0.795 - - - - - - 0.795 - - - egl-9 family hypoxia inducible factor 1 [Source:HGNC Symbol;Acc:HGNC:1232]
100. SRPK2 ENSGALG00000008154 7385 0.793 - - - - - - - 0.793 - - SRSF protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:11306]

There are 362 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA