Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for PPFIA3

Gene Name Gene ID Reads Annotation
PPFIA3 ENSDARG00000077053 310 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]










Genes with expression patterns similar to PPFIA3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. PPFIA3 ENSDARG00000077053 310 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 [Source:ZFIN;Acc:ZDB-GENE-100311-3]
2. CABZ01065506.1 CABZ01065506.1 204 3.726 0.879 1.000 - - - 0.914 0.933 - -
3. syt11a ENSDARG00000057913 1145 3.442 0.769 - - - - 0.844 0.973 0.856 - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
4. syt9a ENSDARG00000003994 298 3.389 0.765 1.000 - - - 0.902 0.722 - - synaptotagmin IXa [Source:ZFIN;Acc:ZDB-GENE-031002-18]
5. upf3a ENSDARG00000069297, ENSDARG00000111067 196 3.342 0.829 0.754 - - - 0.808 0.951 - - UPF3A, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-060721-2]
6. atp2b3b ENSDARG00000023445 1424 3.33 0.836 0.716 - - - 0.810 0.968 - - ATPase plasma membrane Ca2+ transporting 3b [Source:ZFIN;Acc:ZDB-GENE-080409-2]
7. cacna2d3 ENSDARG00000078760 211 3.276 0.850 - - - - 0.859 0.749 0.818 - calcium channel, voltage dependent, alpha2/delta subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030616-133]
8. KCNIP4 ENSDARG00000088100 86 2.941 - 1.000 - - - 0.976 0.965 - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
9. bsk146 ENSDARG00000099069 274 2.878 - 1.000 - - - 0.915 0.963 - - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
10. kctd16a ENSDARG00000004648, ENSDARG00000114292, ENSDARG00000117199 80 2.844 0.874 1.000 - - - 0.970 - - - potassium channel tetramerization domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-060117-1]
11. XKR7 ENSDARG00000026333 175 2.827 0.840 1.000 - - - 0.987 - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
12. BX470131.1 BX470131.1 86 2.823 0.879 - - - - 0.980 0.964 - -
13. atpv0e2 ENSDARG00000059057 585 2.815 0.897 - - - - 0.983 0.935 - - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
14. GADD45G GADD45G 382 2.805 0.863 1.000 - - - - 0.942 - -
15. cbln1 ENSDARG00000057296 165 2.781 0.904 - - - - 0.991 0.886 - - cerebellin 1 precursor [Source:ZFIN;Acc:ZDB-GENE-040718-226]
16. camta1a ENSDARG00000077428, ENSDARG00000116922 176 2.78 - 1.000 - - - 0.823 0.957 - - calmodulin binding transcription activator 1a [Source:ZFIN;Acc:ZDB-GENE-090312-183]
17. btbd3b ENSDARG00000087517 107 2.777 - 1.000 - - - - 0.932 0.845 - BTB (POZ) domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-041210-282]
18. FRMPD3 ENSDARG00000074865, ENSDARG00000109705 276 2.768 0.788 1.000 - - - - 0.980 - - FERM and PDZ domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100316-9]
19. zgc:194665 ENSDARG00000004577 136 2.725 0.857 1.000 - - - - 0.868 - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
20. st6gal1 ENSDARG00000044514 142 2.718 0.766 - - - - 0.968 0.984 - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
21. MAP6 MAP6 643 2.696 0.810 - - - - 0.918 0.968 - -
22. spock2 ENSDARG00000075393 791 2.691 0.915 - - - - 0.844 0.932 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
23. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 2.689 - 0.900 - - - 0.956 0.833 - - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
24. eno2 ENSDARG00000014287 2162 2.681 0.882 - - - - 0.819 0.980 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
25. dpysl4 ENSDARG00000103490 534 2.673 0.759 - - - - 0.942 0.972 - - dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
26. htr3a ENSDARG00000089212 51 2.661 0.843 - - - - 0.987 - 0.831 - 5-hydroxytryptamine (serotonin) receptor 3A [Source:ZFIN;Acc:ZDB-GENE-071012-5]
27. zgc:158291 ENSDARG00000044375, ENSDARG00000111929 621 2.661 0.858 0.822 - - - 0.981 - - - zgc:158291 [Source:ZFIN;Acc:ZDB-GENE-061215-70]
28. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 2.632 - 0.921 - - - 0.816 0.895 - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
29. nrn1a ENSDARG00000071860 1311 2.621 0.820 - - - - 0.823 0.978 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
30. nrcam nrcam 397 2.612 - 1.000 - - - 0.840 0.772 - -
31. hpca ENSDARG00000018397, ENSDARG00000110115 3866 2.603 0.778 - - - - 0.888 0.937 - - hippocalcin [Source:ZFIN;Acc:ZDB-GENE-040426-1683]
32. stmn2a ENSDARG00000033234 2272 2.595 0.838 - - - - 0.835 0.922 - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
33. adarb1a ENSDARG00000041609 476 2.584 0.718 - - - - 0.939 0.927 - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
34. cdk5r1b ENSDARG00000045087 2075 2.583 0.885 - - - - - 0.892 0.806 - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
35. nrxn2a ENSDARG00000061454 291 2.576 0.919 - - - - 0.896 0.761 - - neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
36. nptx1l ENSDARG00000074671 569 2.57 0.790 - - - - 0.830 0.950 - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
37. CLIP3 ENSDARG00000054456 734 2.565 0.713 - - - - 0.966 0.886 - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
38. nmnat2 ENSDARG00000004580 370 2.565 0.776 0.948 - - - - 0.841 - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
39. stmn1b ENSDARG00000033655 9491 2.555 0.706 - - - - 0.873 0.976 - - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
40. scin ENSDARG00000010728, ENSDARG00000111092 437 2.554 - 1.000 - - - 0.815 0.739 - - scinderin [Source:ZFIN;Acc:ZDB-GENE-060503-6]
41. sez6l2 ENSDARG00000076052 360 2.544 0.778 - - - - 0.801 0.965 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
42. zic3 ENSDARG00000071497 1448 2.542 0.740 - - - - 0.981 0.821 - - zic family member 3 heterotaxy 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030708-2]
43. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 2.534 0.720 - - - - 0.892 0.922 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
44. pcsk1nl ENSDARG00000076170 1232 2.529 0.745 - - - - 0.806 0.978 - - proprotein convertase subtilisin/kexin type 1 inhibitor, like [Source:ZFIN;Acc:ZDB-GENE-090427-2]
45. scn1lab ENSDARG00000062744 155 2.528 - 0.731 - - - 0.854 0.943 - - sodium channel, voltage-gated, type I like, alpha b [Source:ZFIN;Acc:ZDB-GENE-060906-1]
46. atp6v0cb ENSDARG00000036577 3472 2.522 0.709 - - - - - 0.967 0.846 - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
47. atp6ap1a ENSDARG00000041417 898 2.521 0.715 - - - - 0.967 0.839 - - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
48. ndrg4 ENSDARG00000103937 1234 2.516 0.919 - - - - 0.719 0.878 - - NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
49. zic1 ENSDARG00000015567 2520 2.507 0.811 - - - - 0.861 0.835 - - zic family member 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000208-4]
50. sox21b ENSDARG00000008540 1460 2.506 0.808 0.731 - - - - 0.967 - - SRY (sex determining region Y)-box 21b [Source:ZFIN;Acc:ZDB-GENE-040429-1]
51. scg2b ENSDARG00000038574 345 2.506 0.860 - - - - 0.787 0.859 - - secretogranin II (chromogranin C), b [Source:ZFIN;Acc:ZDB-GENE-061103-160]
52. scn1bb ENSDARG00000105003 239 2.506 0.777 0.766 - - - - 0.963 - - sodium channel, voltage-gated, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-090408-1]
53. BX957337.1 BX957337.1 1685 2.503 0.763 - - - - 0.820 0.920 - -
54. rtn4r ENSDARG00000090035 46 2.497 0.879 0.709 - - - - 0.909 - - reticulon 4 receptor [Source:ZFIN;Acc:ZDB-GENE-040310-1]
55. thsd7ba ENSDARG00000095022 231 2.496 - 0.770 - - - 0.889 0.837 - - thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
56. TUSC5 TUSC5 1436 2.494 0.810 - - - - 0.796 0.888 - -
57. atp1b4 ENSDARG00000053262 1337 2.494 - 0.764 - - - 0.837 0.893 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
58. dpysl5a ENSDARG00000011141 1827 2.493 - 0.797 - - - 0.745 0.951 - - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
59. lhx5 ENSDARG00000057936 785 2.491 0.768 - - - - 0.772 0.951 - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
60. TUBB2A TUBB2A 142 2.488 0.835 - - - - 0.845 0.808 - -
61. nadl1.2 695 2.479 0.794 - - - - 0.929 0.756 - - neural adhesion molecule L1.2, transcript variant X1
62. UBL7 UBL7 197 2.476 - - - - - 0.930 0.828 0.718 -
63. cers6 ENSDARG00000053583 247 2.475 - 0.754 - - - 0.752 0.969 - - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
64. mdkb ENSDARG00000020708 5393 2.467 0.772 - - - - 0.858 0.837 - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
65. C7H4orf48 C7H4orf48 1455 2.466 0.733 - - - - 0.790 0.943 - -
66. SV2B SV2B 208 2.459 0.823 - - - - 0.735 0.901 - -
67. si:ch211-11c15.3 si:ch211-11c15.3 1279 2.457 0.814 - - - - 0.754 0.889 - -
68. atl1 ENSDARG00000060481 251 2.447 0.707 - - - - 0.918 0.822 - - atlastin GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8003]
69. sncgb ENSDARG00000109715 1014 2.44 0.808 - - - - 0.724 0.908 - - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
70. trpc1 ENSDARG00000061203 62 2.439 0.879 - - - - - 0.701 0.859 - transient receptor potential cation channel, subfamily C, member 1 [Source:ZFIN;Acc:ZDB-GENE-070830-1]
71. phyhipla ENSDARG00000003998, ENSDARG00000115785 262 2.437 0.834 - - - - 0.793 0.810 - - phytanoyl-CoA 2-hydroxylase interacting protein-like a [Source:ZFIN;Acc:ZDB-GENE-061215-64]
72. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.436 0.704 - - - - 0.763 0.969 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
73. PEX5L PEX5L 179 2.426 0.786 0.795 - - - - 0.845 - -
74. zic5 ENSDARG00000016022 1034 2.419 0.751 - - - - 0.848 0.820 - - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
75. gap43 ENSDARG00000099744 4114 2.414 0.779 - - - - 0.701 0.934 - - growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
76. MANEAL ENSDARG00000056450 262 2.406 0.719 - - - - 0.856 0.831 - - mannosidase endo-alpha like [Source:HGNC Symbol;Acc:HGNC:26452]
77. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 2.392 - 0.771 - - - 0.719 0.902 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
78. CT030046.1 CT030046.1 190 2.388 0.709 - - - - 0.892 0.787 - -
79. HMGXB4 HMGXB4 209 2.388 0.793 - - - - - 0.709 0.886 -
80. zic4 ENSDARG00000031307 1228 2.365 0.781 - - - - 0.754 0.830 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
81. SGIP1 SGIP1 236 2.349 0.740 - - - - 0.906 0.703 - -
82. ttyh3b ENSDARG00000007678 537 2.325 0.848 - - - - 0.741 - 0.736 - tweety family member 3b [Source:ZFIN;Acc:ZDB-GENE-051120-105]
83. nrxn1a ENSDARG00000061647, ENSDARG00000111866 1069 2.316 - - - - - 0.706 0.879 0.731 - neurexin 1a [Source:ZFIN;Acc:ZDB-GENE-070206-1]
84. KCNAB2 KCNAB2 129 2.313 0.801 - - - - 0.723 0.789 - -
85. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 2.304 0.741 - - - - 0.735 0.828 - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
86. fez1 ENSDARG00000023174 701 2.303 0.780 - - - - 0.719 0.804 - - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
87. ttll7 ENSDARG00000062973 519 2.297 0.749 - - - - 0.796 0.752 - - tubulin tyrosine ligase-like family, member 7 [Source:ZFIN;Acc:ZDB-GENE-070112-2112]
88. isl1 ENSDARG00000004023 981 2.289 0.782 - - - - 0.712 0.795 - - ISL LIM homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-112]
89. bend3 ENSDARG00000076903 320 2.258 0.758 - - - - 0.788 - 0.712 - BEN domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-090312-181]
90. atat1 ENSDARG00000004472 700 1.986 - 1.000 - - - 0.986 - - - alpha tubulin acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2120]
91. sgms2 57 1.982 - 1.000 - - - 0.982 - - - sphingomyelin synthase 2, transcript variant X1
92. SSBP2 ENSDARG00000099727 22 1.969 - 1.000 - - - 0.969 - - - single-stranded DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-090312-197]
93. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 1.967 - 1.000 - - - 0.967 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
94. slc12a5b ENSDARG00000078187 329 1.964 - 1.000 - - - - 0.964 - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
95. gphnb ENSDARG00000100851 118 1.957 - 1.000 - - - - 0.957 - - gephyrin b [Source:ZFIN;Acc:ZDB-GENE-070705-4]
96. sox2 ENSDARG00000070913 2763 1.95 - - - - - 0.974 0.976 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
97. calb2a ENSDARG00000041062, ENSDARG00000110220 459 1.947 - 1.000 - - - - 0.947 - - calbindin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1677]
98. si:dkey-103i16.2_1 si:dkey-103i16.2_1 105 1.943 - 1.000 - - - - 0.943 - -
99. zgc:174697 zgc:174697 128 1.94 - 1.000 - - - 0.940 - - -
100. syn2a ENSDARG00000045945 434 1.935 - - - - - 0.974 0.961 - - synapsin IIa [Source:ZFIN;Acc:ZDB-GENE-040718-341]

There are 2698 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA