Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PPFIA1

Gene Name Gene ID Reads Annotation
PPFIA1 ENSGALG00000035774 5258 PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]











Genes with expression patterns similar to PPFIA1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PPFIA1 ENSGALG00000035774 5258 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
2. GTF2F2 ENSGALG00000016974 7524 2.438 - - - 0.834 - - 0.724 - - 0.880 general transcription factor IIF subunit 2 [Source:HGNC Symbol;Acc:HGNC:4653]
3. STRADA ENSGALG00000000550 6912 2.435 - - - - - - 0.722 0.783 - 0.930 STE20-related kinase adaptor alpha [Source:NCBI gene;Acc:419957]
4. SNW1 ENSGALG00000010501 17767 2.371 - - - 0.771 - - - - 0.715 0.885 SNW domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16696]
5. MRPS30 ENSGALG00000014874 3416 2.352 - - - 0.923 - - 0.725 - - 0.704 mitochondrial ribosomal protein S30 [Source:NCBI gene;Acc:395781]
6. ENSGALG00000009044 ENSGALG00000009044 14492 2.341 - - - 0.701 - - - - 0.710 0.930
7. BZW2 ENSGALG00000010809 29213 2.333 - - - - - - - 0.774 0.703 0.856 basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
8. SPTSSA ENSGALG00000025755 3361 2.323 - - - - - - 0.701 0.701 - 0.921 serine palmitoyltransferase small subunit A [Source:NCBI gene;Acc:423318]
9. NUBP1 ENSGALG00000007241 3791 2.299 - - - 0.701 - - - 0.738 - 0.860 nucleotide binding protein 1 [Source:NCBI gene;Acc:416634]
10. C4orf27 C4orf27 16724 2.299 - - - - - - 0.805 0.785 0.709 -
11. CHRAC1 ENSGALG00000040823 5695 2.254 - - - - - - 0.705 0.747 - 0.802 chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
12. MRPL55 5995 2.252 - - - 0.758 - - 0.701 0.793 - - mitochondrial ribosomal protein L55
13. ZNF622 ENSGALG00000037171 5706 2.203 - - - 0.701 - - 0.710 0.792 - - zinc finger protein 622 [Source:NCBI gene;Acc:373921]
14. FYTTD1 ENSGALG00000007581 9341 2.172 - - - 0.719 - - 0.738 - - 0.715 forty-two-three domain containing 1 [Source:NCBI gene;Acc:424921]
15. ITGA9 ENSGALG00000029378 415 1.862 - - - 0.898 - - - - - 0.964 integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
16. PGD ENSGALG00000002797 15115 1.827 - - - 0.891 - - - - - 0.936 phosphogluconate dehydrogenase [Source:NCBI gene;Acc:419450]
17. SSR2 ENSGALG00000000764 32190 1.812 - - - 0.851 - - - - - 0.961 signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
18. SMC4 ENSGALG00000009553 15715 1.784 - - - - - - 0.840 - - 0.944 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
19. NARS ENSGALG00000040506 9506 1.771 - - - - - - - 0.806 - 0.965 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
20. INTS10 ENSGALG00000010130 6320 1.75 - - - 0.785 - - - - - 0.965 integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
21. ASB9 ENSGALG00000016563 2780 1.748 - - - 0.814 - - - - - 0.934 ankyrin repeat and SOCS box containing 9 [Source:NCBI gene;Acc:418625]
22. CNTRL ENSGALG00000001513 1773 1.74 - - - 0.778 - - - - - 0.962 centriolin [Source:NCBI gene;Acc:417121]
23. ARHGAP21 ENSGALG00000007721 3961 1.736 - - - - - - 0.760 - - 0.976 Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
24. PRDM4 ENSGALG00000012619 876 1.731 - - - 0.887 - - - - - 0.844 PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
25. TMLHE ENSGALG00000007443 3619 1.717 - - - - - - - - 0.773 0.944 trimethyllysine hydroxylase, epsilon [Source:NCBI gene;Acc:422296]
26. GORASP1 ENSGALG00000006033 4033 1.706 - - - - - - - 0.745 - 0.961 golgi reassembly stacking protein 1 [Source:NCBI gene;Acc:420426]
27. ZC3HC1 ENSGALG00000008003 2750 1.705 - - - - - - 0.763 - - 0.942 zinc finger C3HC-type containing 1 [Source:NCBI gene;Acc:416679]
28. WDSUB1 ENSGALG00000012574 2038 1.7 - - - 0.730 - - - - - 0.970 WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
29. ATG16L1 ENSGALG00000001619 3562 1.699 - - - 0.787 - - - - - 0.912 autophagy related 16 like 1 [Source:HGNC Symbol;Acc:HGNC:21498]
30. PHF2 ENSGALG00000039208 2003 1.699 - - - 0.858 - - - - 0.841 - PHD finger protein 2 [Source:HGNC Symbol;Acc:HGNC:8920]
31. SPDL1 ENSGALG00000001942 4403 1.697 - - - - - - - 0.731 - 0.966 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
32. FAM129A ENSGALG00000004812 269 1.69 - - - - - - - - 0.728 0.962 family with sequence similarity 129 member A [Source:NCBI gene;Acc:424451]
33. BRD1 ENSGALG00000029379 6047 1.685 - - - - - - - 0.717 - 0.968 bromodomain containing 1 [Source:NCBI gene;Acc:417731]
34. MAN2A1 ENSGALG00000000255 4543 1.684 - - - - - - 0.744 - - 0.940 mannosidase alpha class 2A member 1 [Source:HGNC Symbol;Acc:HGNC:6824]
35. FBXO5 ENSGALG00000013607 6156 1.683 - - - - - - 0.795 - - 0.888 F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]
36. MPRIP ENSGALG00000004798 6700 1.683 - - - - - - - 0.730 - 0.953 myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
37. MRPL50 ENSGALG00000015543 11649 1.679 - - - - - - 0.722 - - 0.957 mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
38. GGA.31975 GGA.31975 8825 1.676 - - - - - - 0.766 - - 0.910
39. C1orf198 ENSGALG00000026600 5651 1.673 - - - - - - - 0.736 - 0.937 chromosome 1 open reading frame 198 [Source:HGNC Symbol;Acc:HGNC:25900]
40. PROM1 ENSGALG00000014496 2494 1.671 - - - - - - - 0.702 - 0.969 prominin 1 [Source:NCBI gene;Acc:422825]
41. UTP18 ENSGALG00000002985 7129 1.669 - - - 0.879 - - - 0.790 - - UTP18, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]
42. KIAA1143 ENSGALG00000035952 6735 1.669 - - - 0.876 - - - 0.793 - - KIAA1143 [Source:NCBI gene;Acc:420709]
43. HERC2 ENSGALG00000016739 9900 1.668 - - - 0.841 - - 0.827 - - - HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:418682]
44. ODZ3 ODZ3 2213 1.667 - - - 0.722 - - - - - 0.945
45. ERCC6 ENSGALG00000006254 3452 1.662 - - - - - - - 0.716 - 0.946 ERCC excision repair 6, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:3438]
46. CLSPN ENSGALG00000002346 2590 1.662 - - - 0.736 - - - - - 0.926 claspin [Source:NCBI gene;Acc:428223]
47. PWP1 ENSGALG00000012631 10536 1.658 - - - - - - - 0.774 - 0.884 PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
48. CRCP ENSGALG00000002587 8809 1.657 - - - - - - 0.704 - - 0.953 CGRP receptor component [Source:NCBI gene;Acc:396022]
49. UCHL3 ENSGALG00000016921 16208 1.656 - - - - - - 0.743 - - 0.913 ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
50. TIAR TIAR 2471 1.655 - - - - - - - - 0.794 0.861
51. TMEM165 ENSGALG00000027886 5468 1.654 - - - - - - 0.741 - - 0.913 transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]
52. CLIC4 ENSGALG00000001262 11497 1.649 - - - - - - 0.746 - - 0.903 chloride intracellular channel 4 [Source:HGNC Symbol;Acc:HGNC:13518]
53. POLR1B ENSGALG00000032273 3845 1.642 - - - - - - 0.720 - - 0.922 RNA polymerase I subunit B [Source:HGNC Symbol;Acc:HGNC:20454]
54. AGPS ENSGALG00000009236 2250 1.642 - - - - - - - 0.712 - 0.930 alkylglycerone phosphate synthase [Source:HGNC Symbol;Acc:HGNC:327]
55. C1H21ORF91 ENSGALG00000028290 5550 1.638 - - - - - - - 0.775 - 0.863 chromosome 1 open reading frame, human C21orf91 [Source:NCBI gene;Acc:395489]
56. ARL13B ENSGALG00000015412 2968 1.636 - - - - - - - 0.735 - 0.901 ADP ribosylation factor like GTPase 13B [Source:HGNC Symbol;Acc:HGNC:25419]
57. CIB1 ENSGALG00000008302 13946 1.633 - - - - - - 0.745 - - 0.888 calcium and integrin binding 1 [Source:NCBI gene;Acc:770162]
58. RAB20 ENSGALG00000016844 3250 1.631 - - - 0.745 - - - - - 0.886 RAB20, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18260]
59. SMC5 ENSGALG00000015118 1799 1.63 - - - 0.764 - - - - - 0.866 structural maintenance of chromosomes 5 [Source:NCBI gene;Acc:431608]
60. WRNIP1 ENSGALG00000012856 1954 1.63 - - - - - - 0.702 - - 0.928 Werner helicase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:20876]
61. COG6 ENSGALG00000017035 2777 1.629 - - - - - - - 0.719 - 0.910 component of oligomeric golgi complex 6 [Source:HGNC Symbol;Acc:HGNC:18621]
62. RAB10 ENSGALG00000016535 5272 1.628 - - - - - - 0.778 - - 0.850 RAB10, member RAS oncogene family [Source:NCBI gene;Acc:421994]
63. RRAGC ENSGALG00000033079 4966 1.627 - - - - - - - 0.705 - 0.922 Ras related GTP binding C [Source:NCBI gene;Acc:419605]
64. BAG5 ENSGALG00000031062 4498 1.625 - - - 0.883 - - 0.742 - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
65. BTG1L ENSGALG00000004676 2293 1.623 - - - 0.863 - - - - - 0.760 protein BTG1-like
66. DTWD2 ENSGALG00000002250 1604 1.621 - - - - - - - - 0.740 0.881 DTW domain containing 2 [Source:NCBI gene;Acc:427386]
67. PHF6 ENSGALG00000006094 1748 1.62 - - - 0.867 - - - - 0.753 - PHD finger protein 6 [Source:HGNC Symbol;Acc:HGNC:18145]
68. PAXIP1 ENSGALG00000036064 3120 1.614 - - - 0.843 - - 0.771 - - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
69. CYP20A1 ENSGALG00000008730 930 1.61 - - - 0.900 - - - - 0.710 - cytochrome P450 family 20 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:20576]
70. DPY30 ENSGALG00000010621 6818 1.608 - - - 0.907 - - - 0.701 - - dpy-30, histone methyltransferase complex regulatory subunit [Source:NCBI gene;Acc:421482]
71. NAA30 ENSGALG00000012098 4681 1.603 - - - - - - 0.719 - - 0.884 N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
72. COX5A ENSGALG00000014121 55281 1.603 - - - - - - 0.740 - - 0.863 cytochrome c oxidase subunit 5A [Source:HGNC Symbol;Acc:HGNC:2267]
73. ZNF217 ZNF217 14511 1.6 - - - - - - - 0.785 - 0.815
74. SLC12A4 ENSGALG00000034179 5674 1.599 - - - - - - - 0.752 - 0.847 solute carrier family 12 member 4 [Source:HGNC Symbol;Acc:HGNC:10913]
75. TMX3 ENSGALG00000013757 6387 1.597 - - - - - - 0.738 - - 0.859 Gallus gallus thioredoxin related transmembrane protein 3 (TMX3), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001321606]
76. CPD ENSGALG00000004295 8199 1.596 - - - - - - - 0.711 - 0.885 carboxypeptidase D [Source:HGNC Symbol;Acc:HGNC:2301]
77. FTD FTD 3041 1.595 - - - 0.836 - - - - - 0.759
78. ENSGALG00000014171 ENSGALG00000014171 10383 1.595 - - - - - - 0.760 - - 0.835
79. COX17 ENSGALG00000014981 5646 1.592 - - - - - - - 0.715 - 0.877 COX17, cytochrome c oxidase copper chaperone [Source:NCBI gene;Acc:770190]
80. WDR53 ENSGALG00000006395 4938 1.59 - - - - - - 0.701 - - 0.889 WD repeat domain 53 [Source:HGNC Symbol;Acc:HGNC:28786]
81. PEX2 ENSGALG00000035752 4427 1.589 - - - - - - 0.713 - - 0.876 peroxisomal biogenesis factor 2 [Source:NCBI gene;Acc:420192]
82. HSPA4 ENSGALG00000040882 20966 1.587 - - - - - - 0.801 - - 0.786 heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
83. TRRAP ENSGALG00000003596 6032 1.584 - - - - - - - 0.741 - 0.843 transformation/transcription domain associated protein [Source:HGNC Symbol;Acc:HGNC:12347]
84. WDR45B ENSGALG00000001563 5870 1.58 - - - 0.834 - - 0.746 - - - WD repeat domain 45B [Source:NCBI gene;Acc:417339]
85. MPPED1 ENSGALG00000014186 5726 1.575 - - - - - - 0.712 0.863 - - metallophosphoesterase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1306]
86. SRSF11 ENSGALG00000011305 10435 1.574 - - - 0.837 - - - 0.737 - - serine and arginine rich splicing factor 11 [Source:NCBI gene;Acc:424714]
87. GLRX3 ENSGALG00000010464 22578 1.572 - - - 0.845 - - 0.727 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
88. LOC426385 ENSGALG00000026301 2703 1.567 - - - - - - 0.713 - - 0.854 serine/threonine kinase 35-like, transcript variant X2
89. DGCR2 ENSGALG00000005891 8405 1.559 - - - - - - 0.752 - - 0.807 DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
90. PAK1IP1 ENSGALG00000012724 10907 1.557 - - - - - - - 0.734 - 0.823 PAK1 interacting protein 1 [Source:NCBI gene;Acc:420850]
91. ENSGALG00000004283 ENSGALG00000004283 4771 1.556 - - - 0.744 - - - 0.812 - -
92. KCNK5 ENSGALG00000034077 3233 1.556 - - - 0.843 - - - - - 0.713 potassium two pore domain channel subfamily K member 5 [Source:HGNC Symbol;Acc:HGNC:6280]
93. ENSGALG00000007514 ENSGALG00000007514 4866 1.555 - - - 0.815 - - - 0.740 - -
94. NOC4L ENSGALG00000002272 9644 1.555 - - - - - - 0.824 - - 0.731 nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
95. OSBPL11 ENSGALG00000012059 2523 1.554 - - - 0.804 - - - 0.750 - - oxysterol binding protein like 11 [Source:HGNC Symbol;Acc:HGNC:16397]
96. LSM6 ENSGALG00000009985 18582 1.553 - - - - - - 0.733 - - 0.820 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:422466]
97. LARS ENSGALG00000007494 13966 1.552 - - - 0.803 - - - 0.749 - - leucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:6512]
98. BRMS1L ENSGALG00000010093 4964 1.548 - - - - - - 0.746 - 0.802 - BRMS1 like transcriptional repressor [Source:NCBI gene;Acc:423328]
99. RPF2 ENSGALG00000037087 12788 1.548 - - - - - - 0.792 - - 0.756 ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
100. RAD21 ENSGALG00000029523 25658 1.547 - - - - - - 0.791 - 0.756 - RAD21 cohesin complex component [Source:NCBI gene;Acc:420286]

There are 1529 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA