Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PPDPF

Gene Name Gene ID Reads Annotation
PPDPF ENSGALG00000005849 16711 pancreatic progenitor cell differentiation and proliferation factor [Source:NCBI gene;Acc:419245]











Genes with expression patterns similar to PPDPF

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PPDPF ENSGALG00000005849 16711 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 pancreatic progenitor cell differentiation and proliferation factor [Source:NCBI gene;Acc:419245]
2. LIX1 ENSGALG00000015290 7589 1.582 - - - - - - 0.748 - 0.834 - limb and CNS expressed 1 [Source:NCBI gene;Acc:374264]
3. EGFL7 ENSGALG00000043499 6272 1.547 - - - - - - 0.822 - - 0.725 EGF like domain multiple 7 [Source:NCBI gene;Acc:417137]
4. DCDC2 ENSGALG00000042454 2306 1.537 - - - - - - - - 0.836 0.701 doublecortin domain containing 2 [Source:HGNC Symbol;Acc:HGNC:18141]
5. HNF1B ENSGALG00000005504 1146 1.533 - - - - - - - - 0.798 0.735 HNF1 homeobox B [Source:HGNC Symbol;Acc:HGNC:11630]
6. CDH1 ENSGALG00000000608 6156 1.515 - - - - - - 0.782 - 0.733 - cadherin 3 [Source:NCBI gene;Acc:414845]
7. SNAI2 ENSGALG00000030902 8201 1.502 - - - - - - 0.789 0.713 - - snail family transcriptional repressor 2
8. PAX2 ENSGALG00000005689 351 1.502 - - - - - - - - 0.735 0.767 paired box 2 [Source:NCBI gene;Acc:395574]
9. MRPL20 ENSGALG00000001542 28764 1.497 - - - - - - 0.779 0.718 - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
10. TSC22D2 ENSGALG00000027591 6594 1.486 - - - - - - 0.757 0.729 - - TSC22 domain family member 2 [Source:HGNC Symbol;Acc:HGNC:29095]
11. RUVBL1 ENSGALG00000005931 9379 1.479 - - - - - - 0.734 0.745 - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
12. NIFK ENSGALG00000011650 14990 1.469 - - - - - - 0.761 0.708 - - nucleolar protein interacting with the FHA domain of MKI67 [Source:HGNC Symbol;Acc:HGNC:17838]
13. Mar-05 Mar-05 6330 1.453 - - - - - - 0.743 0.710 - -
14. LIMD1 ENSGALG00000035623 7282 1.448 - - - - - - 0.740 0.708 - - LIM domains containing 1 [Source:HGNC Symbol;Acc:HGNC:6612]
15. GAL10 GAL10 33355 1.446 - - - - - - - - 0.737 0.709
16. SMDT1 ENSGALG00000011897 9360 1.438 - - - - - - 0.710 0.728 - - single-pass membrane protein with aspartate rich tail 1 [Source:HGNC Symbol;Acc:HGNC:25055]
17. UBE2D1 ENSGALG00000021213 5876 1.435 - - - - - - 0.705 0.730 - - ubiquitin conjugating enzyme E2 D1 [Source:NCBI gene;Acc:423641]
18. BCAP29 ENSGALG00000008009 8519 1.427 - - - - - - 0.721 0.706 - - B cell receptor associated protein 29 [Source:NCBI gene;Acc:417702]
19. HNRNPD ENSGALG00000011184 10686 1.417 - - - - - - 0.708 0.709 - - heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
20. NPHS2 ENSGALG00000004163 850 0.951 - - - - - - - - 0.951 - NPHS2, podocin [Source:HGNC Symbol;Acc:HGNC:13394]
21. TF ENSGALG00000006453 14007 0.935 - - - - - - - - 0.935 - transferrin (ovotransferrin) [Source:NCBI gene;Acc:396241]
22. PTPRQ ENSGALG00000010935 626 0.916 - - - - - - - - 0.916 - protein tyrosine phosphatase, receptor type Q [Source:HGNC Symbol;Acc:HGNC:9679]
23. FNDC5 ENSGALG00000003567 3328 0.886 - - - - - - - - 0.886 - Gallus gallus fibronectin type III domain containing 5 (FNDC5), mRNA. [Source:RefSeq mRNA;Acc:NM_001318986]
24. SRMS ENSGALG00000005852 174 0.885 - - - - - - - - 0.885 - src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites [Source:HGNC Symbol;Acc:HGNC:11298]
25. HBE 329974 0.883 - - - - - - - - 0.883 - hemoglobin subunit epsilon
26. HBG1 HBG1 468163 0.875 - - - - - - - - 0.875 -
27. HBZ ENSGALG00000023740 507289 0.864 - - - - - - - - 0.864 - hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
28. PODXL ENSGALG00000006409 30676 0.864 - - - - - - - - 0.864 - podocalyxin like [Source:NCBI gene;Acc:395755]
29. PSMB2 ENSGALG00000026421 51885 0.858 - - - - - - 0.858 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
30. PCBD1 ENSGALG00000027835 18019 0.856 - - - - - - - - 0.856 - pterin-4 alpha-carbinolamine dehydratase 1 [Source:NCBI gene;Acc:395729]
31. ELOVL7 ENSGALG00000014730 1820 0.856 - - - - - - - - 0.856 - ELOVL fatty acid elongase 7 [Source:NCBI gene;Acc:431579]
32. FAM49A ENSGALG00000016463 6345 0.854 - - - - - - - - 0.854 - family with sequence similarity 49 member A [Source:NCBI gene;Acc:421949]
33. ENSGALG00000024035 ENSGALG00000024035 544 0.852 - - - - - - - - 0.852 -
34. CIDEA ENSGALG00000034500 405 0.845 - - - - - - - - 0.845 - cell death-inducing DFFA-like effector a [Source:NCBI gene;Acc:768659]
35. ACE ENSGALG00000000498 1398 0.833 - - - - - - - - 0.833 - angiotensin I converting enzyme [Source:NCBI gene;Acc:419953]
36. ILK ENSGALG00000031642 11321 0.832 - - - - - - 0.832 - - - integrin linked kinase [Source:NCBI gene;Acc:374018]
37. UMPS ENSGALG00000011770 11331 0.829 - - - - - - 0.829 - - - uridine monophosphate synthetase [Source:NCBI gene;Acc:424256]
38. WBP4 ENSGALG00000016949 5858 0.828 - - - - 0.828 - - - - - WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
39. FYTTD1 ENSGALG00000007581 9341 0.827 - - - - - - 0.827 - - - forty-two-three domain containing 1 [Source:NCBI gene;Acc:424921]
40. EHD3 ENSGALG00000009086 14407 0.825 - - - - - - 0.825 - - - EH domain containing 3 [Source:NCBI gene;Acc:421306]
41. WNT5A ENSGALG00000034168 10160 0.822 - - - - - - 0.822 - - - Wnt family member 5A [Source:NCBI gene;Acc:395703]
42. NDUFAB1 ENSGALG00000006073 40467 0.819 - - - - - - 0.819 - - - NADH:ubiquinone oxidoreductase subunit AB1 [Source:HGNC Symbol;Acc:HGNC:7694]
43. CXXC5 ENSGALG00000000884 16351 0.819 - - - - - - 0.819 - - - CXXC finger protein 5 [Source:HGNC Symbol;Acc:HGNC:26943]
44. PKM ENSGALG00000001992 93960 0.818 - - - - 0.818 - - - - - pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
45. ZBTB7C ENSGALG00000033408 711 0.816 - - - - - - - - 0.816 - zinc finger and BTB domain containing 7C [Source:HGNC Symbol;Acc:HGNC:31700]
46. SKP2 ENSGALG00000003547 14637 0.81 - - - - - - 0.810 - - - S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]
47. HMGB2 ENSGALG00000010745 89235 0.81 - - - - - - 0.810 - - - high mobility group box 2 [Source:NCBI gene;Acc:396482]
48. CSE1L ENSGALG00000004707 20653 0.809 - - - - - - 0.809 - - - chromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]
49. CA2 ENSGALG00000030781 1723 0.809 - - - - - - - - 0.809 - carbonic anhydrase 2 [Source:NCBI gene;Acc:396257]
50. GGA.1330 GGA.1330 11281 0.808 - - - - - - 0.808 - - -
51. FKBP12 FKBP12 64317 0.808 - - - - - - 0.808 - - -
52. SOX18 ENSGALG00000034118 5453 0.807 - - - - - - 0.807 - - - SRY-box 18 [Source:NCBI gene;Acc:374200]
53. GPC4 ENSGALG00000006080 56498 0.805 - - - - - - 0.805 - - - glypican 4 [Source:HGNC Symbol;Acc:HGNC:4452]
54. RPS28 ENSGALG00000024398 244056 0.803 - - - - - - 0.803 - - - ribosomal protein S28 [Source:NCBI gene;Acc:768930]
55. SSR3 ENSGALG00000028683 24334 0.802 - - - - - - 0.802 - - - signal sequence receptor subunit 3 [Source:NCBI gene;Acc:425027]
56. LDB2 ENSGALG00000014485 22490 0.802 - - - - - - 0.802 - - - LIM domain binding 2 [Source:NCBI gene;Acc:395631]
57. ACTN1 ENSGALG00000042458 10477 0.801 - - - - - - 0.801 - - - actinin, alpha 1 [Source:NCBI gene;Acc:373918]
58. PPIH ENSGALG00000004874 25558 0.8 - - - - - - 0.800 - - - peptidylprolyl isomerase H [Source:NCBI gene;Acc:419507]
59. TM9SF2 ENSGALG00000016878 11548 0.8 - - - - - - 0.800 - - - transmembrane 9 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11865]
60. ITGB1 ENSGALG00000007145 19551 0.8 - - - - - - 0.800 - - - integrin subunit beta 1 [Source:NCBI gene;Acc:374058]
61. KDELR2 ENSGALG00000040793 29669 0.799 - - - - - - 0.799 - - - KDEL endoplasmic reticulum protein retention receptor 2 [Source:NCBI gene;Acc:771927]
62. EVL ENSGALG00000011209 5440 0.798 - - - - - - 0.798 - - - Enah/Vasp-like [Source:NCBI gene;Acc:423453]
63. COL5A2 ENSGALG00000031112 18358 0.798 - - - - - - 0.798 - - - collagen type V alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2210]
64. HBB HBB 7552 0.797 - - - - - - - - 0.797 -
65. TUBB6 ENSGALG00000031275 17690 0.797 - - - - - - 0.797 - - - tubulin beta 6 class V [Source:NCBI gene;Acc:421037]
66. ACTR2 ENSGALG00000008779 17812 0.796 - - - - - - 0.796 - - - ARP2 actin related protein 2 homolog [Source:NCBI gene;Acc:396147]
67. TMED7 ENSGALG00000028484 21008 0.795 - - - - - - 0.795 - - - Gallus gallus transmembrane p24 trafficking protein 7 (TMED7), mRNA. [Source:RefSeq mRNA;Acc:NM_001319030]
68. PRELID1 ENSGALG00000002990 55592 0.795 - - - - - - 0.795 - - - PRELI domain containing 1 [Source:NCBI gene;Acc:395819]
69. PCP4 ENSGALG00000022819 880 0.794 - - - - - - - - 0.794 - Purkinje cell protein 4 [Source:NCBI gene;Acc:771220]
70. MED28 ENSGALG00000007138 7686 0.793 - - - - - - - 0.793 - - mediator complex subunit 28 [Source:HGNC Symbol;Acc:HGNC:24628]
71. RALB ENSGALG00000026493 14590 0.791 - - - - - - 0.791 - - - RAS like proto-oncogene B [Source:HGNC Symbol;Acc:HGNC:9840]
72. KIAA1551 ENSGALG00000045168 3435 0.79 - - - - - - 0.790 - - - KIAA1551, transcript variant X1
73. STRN3 ENSGALG00000040464 9045 0.789 - - - - - - 0.789 - - - striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]
74. RAB10 ENSGALG00000016535 5272 0.789 - - - - - - 0.789 - - - RAB10, member RAS oncogene family [Source:NCBI gene;Acc:421994]
75. RDH10 ENSGALG00000034346 15285 0.788 - - - - - - 0.788 - - - retinol dehydrogenase 10 [Source:NCBI gene;Acc:420183]
76. LCP1 ENSGALG00000016986 801 0.786 - - - - - - - - 0.786 - lymphocyte cytosolic protein 1 [Source:NCBI gene;Acc:418852]
77. DERL1 ENSGALG00000033950 15074 0.786 - - - - - - 0.786 - - - derlin 1 [Source:NCBI gene;Acc:420350]
78. TET1 ENSGALG00000031604 13002 0.786 - - - - - - 0.786 - - - tet methylcytosine dioxygenase 1 [Source:HGNC Symbol;Acc:HGNC:29484]
79. LEPREL4 LEPREL4 5609 0.785 - - - - - - 0.785 - - -
80. TARDBP ENSGALG00000002906 24748 0.785 - - - - - - 0.785 - - - TAR DNA binding protein [Source:NCBI gene;Acc:419453]
81. GLO1 ENSGALG00000010127 31662 0.784 - - - - - - 0.784 - - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
82. NDUFB8 ENSGALG00000005704 5781 0.783 - - - - - - - 0.783 - - NADH:ubiquinone oxidoreductase subunit B8 [Source:NCBI gene;Acc:423763]
83. PPIC ENSGALG00000005346 5002 0.783 - - - - - - 0.783 - - - peptidylprolyl isomerase C [Source:HGNC Symbol;Acc:HGNC:9256]
84. EPFIP1L ENSGALG00000007683 18050 0.783 - - - - - - 0.783 - - - re-mRNA 3'-end-processing factor FIP1-like, transcript variant X2
85. YWHAZ ENSGALG00000031387 84985 0.783 - - - - - - 0.783 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
86. DNAJA4 ENSGALG00000036850 6847 0.782 - - - - - - 0.782 - - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
87. PPP1CC ENSGALG00000004571 14748 0.781 - - - - - - 0.781 - - - protein phosphatase 1 catalytic subunit gamma [Source:NCBI gene;Acc:416872]
88. LMAN2 ENSGALG00000033232 11740 0.781 - - - - - - 0.781 - - - lectin, mannose binding 2 [Source:HGNC Symbol;Acc:HGNC:16986]
89. ENSGALG00000017396 ENSGALG00000017396 9028 0.78 - - - - - - 0.780 - - -
90. CMPK CMPK 9569 0.779 - - - - - - 0.779 - - -
91. BRP44 BRP44 17093 0.779 - - - - - - 0.779 - - -
92. METAP2 ENSGALG00000011377 16311 0.779 - - - - - - 0.779 - - - methionyl aminopeptidase 2 [Source:NCBI gene;Acc:417912]
93. EIF4A2 ENSGALG00000008684 58507 0.777 - - - - - - 0.777 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
94. DKC1 ENSGALG00000005054 30350 0.777 - - - - - - 0.777 - - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
95. NFKBIZ ENSGALG00000015346 770 0.776 - - - - - - - - 0.776 - NFKB inhibitor zeta [Source:NCBI gene;Acc:418404]
96. HAPLN1 ENSGALG00000015627 14942 0.776 - - - - - - 0.776 - - - hyaluronan and proteoglycan link protein 1 [Source:NCBI gene;Acc:396475]
97. SPCS3 ENSGALG00000010839 19106 0.776 - - - - - - 0.776 - - - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
98. MAP2K4 ENSGALG00000032178 5982 0.775 - - - - - - 0.775 - - - mitogen-activated protein kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6844]
99. GFPT1 ENSGALG00000036391 14025 0.774 - - - - - - - 0.774 - - glutamine--fructose-6-phosphate transaminase 1 [Source:NCBI gene;Acc:419514]
100. ESM1 ENSGALG00000027707 328 0.774 - - - - - - - - 0.774 - endothelial cell specific molecule 1 [Source:HGNC Symbol;Acc:HGNC:3466]

There are 320 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA