Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PPCS

Gene Name Gene ID Reads Annotation
PPCS ENSGALG00000004882 5759 phosphopantothenoylcysteine synthetase [Source:HGNC Symbol;Acc:HGNC:25686]











Genes with expression patterns similar to PPCS

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PPCS ENSGALG00000004882 5759 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 phosphopantothenoylcysteine synthetase [Source:HGNC Symbol;Acc:HGNC:25686]
2. NDUFB3 ENSGALG00000008239 15511 1.746 - - - - - - 0.811 0.935 - - NADH:ubiquinone oxidoreductase subunit B3 [Source:NCBI gene;Acc:424078]
3. CHMP3 ENSGALG00000015805 11581 1.743 - - - - - - 0.800 0.943 - - charged multivesicular body protein 3
4. TMEM59 ENSGALG00000010746 4669 1.692 - - - - - - 0.731 0.961 - - transmembrane protein 59 [Source:NCBI gene;Acc:424656]
5. TSC22D2 ENSGALG00000027591 6594 1.692 - - - - - - 0.751 0.941 - - TSC22 domain family member 2 [Source:HGNC Symbol;Acc:HGNC:29095]
6. gga-mir-1772 ENSGALG00000025300 2892 1.685 - - - - - - 0.728 0.957 - - gga-mir-1772 [Source:miRBase;Acc:MI0007515]
7. CHMP6 ENSGALG00000026428 18026 1.68 - - - - - - 0.719 0.961 - - charged multivesicular body protein 6 [Source:NCBI gene;Acc:428673]
8. PGAM5 ENSGALG00000002137 7700 1.664 - - - - - - 0.768 0.896 - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]
9. RUVBL1 ENSGALG00000005931 9379 1.655 - - - - - - 0.763 0.892 - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
10. AHCTF1 ENSGALG00000010630 4809 1.649 - - - - - - 0.723 0.926 - - AT-hook containing transcription factor 1 [Source:NCBI gene;Acc:421484]
11. HNRNPD ENSGALG00000011184 10686 1.646 - - - - - - 0.819 0.827 - - heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
12. SMDT1 ENSGALG00000011897 9360 1.641 - - - - - - 0.726 0.915 - - single-pass membrane protein with aspartate rich tail 1 [Source:HGNC Symbol;Acc:HGNC:25055]
13. FXR1 ENSGALG00000008864 10250 1.631 - - - - - - 0.742 0.889 - - FMR1 autosomal homolog 1 [Source:NCBI gene;Acc:424968]
14. ERGIC2 ENSGALG00000007183 12870 1.618 - - - - - - 0.705 0.913 - - ERGIC and golgi 2 [Source:NCBI gene;Acc:417697]
15. MRPL20 ENSGALG00000001542 28764 1.613 - - - - - - 0.804 0.809 - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
16. LEPREL4 LEPREL4 5609 1.612 - - - - - - 0.755 0.857 - -
17. SNAI2 ENSGALG00000030902 8201 1.608 - - - - - - 0.738 0.870 - - snail family transcriptional repressor 2
18. MARC1 ENSGALG00000009453 5675 1.59 - - - - - - 0.706 0.884 - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
19. DLD ENSGALG00000007931 11011 1.589 - - - - - - 0.743 0.846 - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
20. CTSC ENSGALG00000017239 7651 1.578 - - - - - - 0.709 0.869 - - Gallus gallus cathepsin C (CTSC), mRNA. [Source:RefSeq mRNA;Acc:NM_001321554]
21. UTP6 ENSGALG00000003260 4909 1.553 - - - - - - 0.715 0.838 - - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
22. KCTD6 ENSGALG00000007111 3557 1.546 - - - - - - 0.701 0.845 - - potassium channel tetramerization domain containing 6 [Source:HGNC Symbol;Acc:HGNC:22235]
23. PFDN1 ENSGALG00000000946 18822 1.543 - - - - - - 0.764 0.779 - - prefoldin subunit 1 [Source:NCBI gene;Acc:416142]
24. SPG21 ENSGALG00000007262 8050 1.542 - - - - - - 0.726 0.816 - - SPG21, maspardin [Source:NCBI gene;Acc:415526]
25. LIMD1 ENSGALG00000035623 7282 1.541 - - - - - - 0.717 0.824 - - LIM domains containing 1 [Source:HGNC Symbol;Acc:HGNC:6612]
26. MED28 ENSGALG00000007138 7686 1.519 - - - - - - 0.713 0.806 - - mediator complex subunit 28 [Source:HGNC Symbol;Acc:HGNC:24628]
27. SART3 ENSGALG00000039472 4948 1.517 - - - - - - 0.713 0.804 - - squamous cell carcinoma antigen recognized by T cells 3 [Source:HGNC Symbol;Acc:HGNC:16860]
28. CNOT8 ENSGALG00000003950 8271 1.493 - - - - - - 0.765 0.728 - - CCR4-NOT transcription complex subunit 8 [Source:NCBI gene;Acc:416255]
29. RNPS1 ENSGALG00000009288 13588 1.442 - - - - - - 0.741 0.701 - - RNA binding protein with serine rich domain 1 [Source:HGNC Symbol;Acc:HGNC:10080]
30. KHDRBS1 ENSGALG00000003272 4249 0.968 - - - - - - - 0.968 - - KH RNA binding domain containing, signal transduction associated 1 [Source:NCBI gene;Acc:374071]
31. RNF214 ENSGALG00000036993 3729 0.967 - - - - - - - 0.967 - - ring finger protein 214 [Source:HGNC Symbol;Acc:HGNC:25335]
32. TCEA1 ENSGALG00000015274 2706 0.966 - - - - - - - 0.966 - - transcription elongation factor A1 [Source:NCBI gene;Acc:421119]
33. SRP72 ENSGALG00000011403 13666 0.965 - - - - - - - 0.965 - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
34. BRCC3 ENSGALG00000005383 4844 0.964 - - - - - - - 0.964 - - BRCA1/BRCA2-containing complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:24185]
35. FGFR1OP ENSGALG00000011423 2418 0.964 - - - - - - - 0.964 - - FGFR1 oncogene partner [Source:HGNC Symbol;Acc:HGNC:17012]
36. ENSGALG00000014190 ENSGALG00000014190 5735 0.962 - - - - - - - 0.962 - -
37. ACSL1 ENSGALG00000010628 2560 0.962 - - - - - - - 0.962 - - acyl-CoA synthetase long chain family member 1 [Source:NCBI gene;Acc:422547]
38. ARFRP1 ENSGALG00000006101 3743 0.962 - - - - - - - 0.962 - - ADP ribosylation factor related protein 1 [Source:HGNC Symbol;Acc:HGNC:662]
39. SMARCC1 ENSGALG00000032642 4842 0.96 - - - - - - - 0.960 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 [Source:HGNC Symbol;Acc:HGNC:11104]
40. SLC25A1 ENSGALG00000041760 4744 0.96 - - - - - - - 0.960 - - solute carrier family 25 member 1, transcript variant X2
41. UCK2 ENSGALG00000003510 2512 0.958 - - - - - - - 0.958 - - uridine-cytidine kinase 2 [Source:NCBI gene;Acc:424406]
42. PEO1 PEO1 6747 0.958 - - - - - - - 0.958 - -
43. TRMT44 ENSGALG00000015594 1490 0.957 - - - - - - - 0.957 - - tRNA methyltransferase 44 homolog [Source:HGNC Symbol;Acc:HGNC:26653]
44. LATS2 4776 0.957 - - - - - - - 0.957 - - large tumor suppressor kinase 2
45. MAST2 ENSGALG00000010313 2975 0.956 - - - - - - - 0.956 - - microtubule associated serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:19035]
46. ENSGALG00000003150 ENSGALG00000003150 10001 0.956 - - - - - - - 0.956 - -
47. TMEM57 ENSGALG00000001067 3367 0.956 - - - - - - - 0.956 - - transmembrane protein 57 [Source:NCBI gene;Acc:419590]
48. PNISR ENSGALG00000015483 7711 0.955 - - - - - - - 0.955 - - PNN interacting serine and arginine rich protein [Source:NCBI gene;Acc:421796]
49. DCTN5 ENSGALG00000006088 3113 0.955 - - - - - - - 0.955 - - dynactin subunit 5 [Source:NCBI gene;Acc:416574]
50. NET1 ENSGALG00000008437 9850 0.955 - - - - - - - 0.955 - - neuroepithelial cell transforming 1 [Source:NCBI gene;Acc:416693]
51. EFHD1 ENSGALG00000001428 2831 0.955 - - - - - - - 0.955 - - EF-hand domain family member D1 [Source:NCBI gene;Acc:424741]
52. GOLGB1 ENSGALG00000041494 2376 0.955 - - - - - - - 0.955 - - golgin B1 [Source:HGNC Symbol;Acc:HGNC:4429]
53. ZC3H3 ENSGALG00000043265 1638 0.955 - - - - - - - 0.955 - - zinc finger CCCH-type containing 3 [Source:NCBI gene;Acc:430349]
54. TRIM24 ENSGALG00000012823 2725 0.954 - - - - - - - 0.954 - - tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
55. ARHGEF4 ENSGALG00000002193 558 0.954 - - - - - - - 0.954 - - Rho guanine nucleotide exchange factor 4 [Source:HGNC Symbol;Acc:HGNC:684]
56. PYCR1 ENSGALG00000007300 7987 0.954 - - - - - - - 0.954 - - pyrroline-5-carboxylate reductase 1 [Source:NCBI gene;Acc:769203]
57. SMIM12 ENSGALG00000030261 5860 0.953 - - - - - - - 0.953 - - small integral membrane protein 12 [Source:NCBI gene;Acc:100858028]
58. CARS2 ENSGALG00000016847 3814 0.953 - - - - - - - 0.953 - - cysteinyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25695]
59. PKP4 ENSGALG00000012561 3087 0.953 - - - - - - - 0.953 - - plakophilin 4 [Source:NCBI gene;Acc:424328]
60. RDM1 ENSGALG00000000243 3388 0.953 - - - - - - - 0.953 - - RAD52 motif containing 1 [Source:NCBI gene;Acc:395228]
61. REV3L ENSGALG00000015033 1917 0.953 - - - - - - - 0.953 - - REV3 like, DNA directed polymerase zeta catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9968]
62. AMMECR1L ENSGALG00000026728 2134 0.952 - - - - - - - 0.952 - - AMMECR1 like [Source:HGNC Symbol;Acc:HGNC:28658]
63. NGEF ENSGALG00000036327 1048 0.952 - - - - - - - 0.952 - - neuronal guanine nucleotide exchange factor [Source:NCBI gene;Acc:424744]
64. MTMR9 ENSGALG00000016649 2055 0.951 - - - - - - - 0.951 - - myotubularin related protein 9 [Source:NCBI gene;Acc:422033]
65. DNAJA1 ENSGALG00000023066 3820 0.951 - - - - - - - 0.951 - - DnaJ heat shock protein family (Hsp40) member A1 [Source:NCBI gene;Acc:427376]
66. CHAF1A ENSGALG00000001126 6506 0.951 - - - - - - - 0.951 - - chromatin assembly factor 1 subunit A [Source:NCBI gene;Acc:770217]
67. SLC35E3 ENSGALG00000009940 8560 0.951 - - - - - - - 0.951 - - solute carrier family 35 member E3 [Source:NCBI gene;Acc:417842]
68. LIG3 ENSGALG00000002288 7198 0.95 - - - - - - - 0.950 - - DNA ligase 3 [Source:NCBI gene;Acc:417530]
69. STX18 ENSGALG00000015012 1489 0.95 - - - - - - - 0.950 - - syntaxin 18 [Source:NCBI gene;Acc:422848]
70. ABCA3 ENSGALG00000037837 1606 0.949 - - - - - - - 0.949 - - ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]
71. REXO1 ENSGALG00000001043 3179 0.949 - - - - - - - 0.949 - - RNA exonuclease 1 homolog [Source:HGNC Symbol;Acc:HGNC:24616]
72. BAG3 ENSGALG00000009433 6152 0.949 - - - - - - - 0.949 - - BCL2 associated athanogene 3 [Source:HGNC Symbol;Acc:HGNC:939]
73. ARRDC4 ENSGALG00000007012 1039 0.949 - - - - - - - 0.949 - - arrestin domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28087]
74. NEMF ENSGALG00000012263 2250 0.948 - - - - - - - 0.948 - - nuclear export mediator factor [Source:NCBI gene;Acc:428926]
75. CEP170 ENSGALG00000010733 4177 0.948 - - - - - - - 0.948 - - centrosomal protein 170 [Source:HGNC Symbol;Acc:HGNC:28920]
76. NR2F2 ENSGALG00000007000 4911 0.948 - - - - - - - 0.948 - - nuclear receptor subfamily 2 group F member 2 [Source:NCBI gene;Acc:386585]
77. VCAN ENSGALG00000015624 11489 0.948 - - - - - - - 0.948 - - versican [Source:NCBI gene;Acc:395565]
78. NSRP1 ENSGALG00000004186 1683 0.947 - - - - - - - 0.947 - - nuclear speckle splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25305]
79. HDGFL2 ENSGALG00000027068 1300 0.947 - - - - - - - 0.947 - - HDGF like 2 [Source:NCBI gene;Acc:772302]
80. KDM4A ENSGALG00000010074 7219 0.947 - - - - - - - 0.947 - - lysine demethylase 4A
81. MTERFD1 MTERFD1 3640 0.947 - - - - - - - 0.947 - -
82. ALG9 ENSGALG00000021174 745 0.946 - - - - - - - 0.946 - - ALG9, alpha-1,2-mannosyltransferase, transcript variant X5
83. C7orf25 ENSGALG00000040161 694 0.946 - - - - - - - 0.946 - - chromosome 7 open reading frame 25 [Source:HGNC Symbol;Acc:HGNC:21703]
84. MRPL18 ENSGALG00000011625 7855 0.946 - - - - - - - 0.946 - - mitochondrial ribosomal protein L18 [Source:HGNC Symbol;Acc:HGNC:14477]
85. GLG1 ENSGALG00000039818 6221 0.946 - - - - - - - 0.946 - - golgi glycoprotein 1 [Source:NCBI gene;Acc:396492]
86. TFEB ENSGALG00000039878 881 0.946 - - - - - - - 0.946 - - transcription factor EB [Source:NCBI gene;Acc:419922]
87. ADIPOR1 ENSGALG00000000094 1862 0.946 - - - - - - - 0.946 - - adiponectin receptor 1 [Source:NCBI gene;Acc:421148]
88. H3-I H3-I 1498 0.945 - - - - - - - 0.945 - -
89. VGLL4 ENSGALG00000004937 3762 0.945 - - - - - - - 0.945 - - vestigial like family member 4 [Source:NCBI gene;Acc:415962]
90. CKAP2 ENSGALG00000017025 25020 0.945 - - - - - - - 0.945 - - cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
91. RGS17 ENSGALG00000026034 707 0.945 - - - - - - - 0.945 - - regulator of G protein signaling 17 [Source:NCBI gene;Acc:395645]
92. APOOL ENSGALG00000006978 1953 0.945 - - - - - - - 0.945 - - apolipoprotein O like [Source:NCBI gene;Acc:422271]
93. CC2D2A ENSGALG00000014514 1180 0.944 - - - - - - - 0.944 - - coiled-coil and C2 domain containing 2A [Source:HGNC Symbol;Acc:HGNC:29253]
94. GTDC1 ENSGALG00000012424 1446 0.944 - - - - - - - 0.944 - - glycosyltransferase like domain containing 1 [Source:NCBI gene;Acc:424304]
95. PWWP2A ENSGALG00000038202 3686 0.943 - - - - - - - 0.943 - - PWWP domain containing 2A [Source:HGNC Symbol;Acc:HGNC:29406]
96. CAMSAP2 ENSGALG00000002145 6109 0.943 - - - - - - - 0.943 - - calmodulin regulated spectrin associated protein family member 2 [Source:HGNC Symbol;Acc:HGNC:29188]
97. ATG4C ENSGALG00000010985 6102 0.943 - - - - - - - 0.943 - - autophagy related 4C cysteine peptidase [Source:HGNC Symbol;Acc:HGNC:16040]
98. EDEM1 ENSGALG00000008320 3117 0.942 - - - - - - - 0.942 - - ER degradation enhancing alpha-mannosidase like protein 1 [Source:NCBI gene;Acc:416110]
99. WASH1 WASH1 3240 0.942 - - - - - - - 0.942 - -
100. BTG1L ENSGALG00000004676 2293 0.942 - - - - - - - 0.942 - - protein BTG1-like

There are 591 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA