Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PPARGC1A

Gene Name Gene ID Reads Annotation
PPARGC1A ENSGALG00000042851 364 PPARG coactivator 1 alpha [Source:NCBI gene;Acc:422815]











Genes with expression patterns similar to PPARGC1A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PPARGC1A ENSGALG00000042851 364 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 PPARG coactivator 1 alpha [Source:NCBI gene;Acc:422815]
2. ZPBP2 ENSGALG00000013484 14 1.536 - - - 0.818 - 0.718 - - - - zona pellucida binding protein 2 [Source:NCBI gene;Acc:404532]
3. SBF2 ENSGALG00000005716 134 1.529 - - 0.820 0.709 - - - - - - SET binding factor 2 [Source:NCBI gene;Acc:423043]
4. C3ORF64 C3ORF64 49 0.939 - - 0.939 - - - - - - -
5. ENSGALG00000029120 ENSGALG00000029120 73 0.921 - - 0.921 - - - - - - -
6. ENSGALG00000026975 ENSGALG00000026975 8 0.914 - - 0.914 - - - - - - -
7. STK38 ENSGALG00000000523 44 0.912 - - 0.912 - - - - - - - serine/threonine kinase 38 [Source:HGNC Symbol;Acc:HGNC:17847]
8. NSL1/DC31 NSL1/DC31 43 0.912 - - 0.912 - - - - - - -
9. TMEM230 ENSGALG00000036876 55 0.906 - - 0.906 - - - - - - - transmembrane protein 230 [Source:NCBI gene;Acc:419518]
10. ENSGALG00000000407 ENSGALG00000000407 32 0.906 - - 0.906 - - - - - - -
11. YDJC ENSGALG00000029198 14 0.905 - - 0.905 - - - - - - - YdjC chitooligosaccharide deacetylase homolog [Source:HGNC Symbol;Acc:HGNC:27158]
12. IKBIP ENSGALG00000026284 31 0.904 - - 0.904 - - - - - - - IKBKB interacting protein [Source:HGNC Symbol;Acc:HGNC:26430]
13. HOXA9 ENSGALG00000028983 9298 0.902 - - 0.902 - - - - - - - homeobox A9 [Source:NCBI gene;Acc:396096]
14. LRRC56 ENSGALG00000041955 16 0.902 - - 0.902 - - - - - - - leucine rich repeat containing 56 [Source:HGNC Symbol;Acc:HGNC:25430]
15. PLAG1 ENSGALG00000015407 17 0.902 - - 0.902 - - - - - - - PLAG1 zinc finger [Source:NCBI gene;Acc:429484]
16. SPTSSBL ENSGALG00000026131 70 0.901 - - 0.901 - - - - - - - serine palmitoyltransferase small subunit B-like, transcript variant X6
17. ANKRD42 8 0.901 - - 0.901 - - - - - - - ankyrin repeat domain 42
18. LHX6 ENSGALG00000001347 7 0.901 - - 0.901 - - - - - - - LIM homeobox 6 [Source:HGNC Symbol;Acc:HGNC:21735]
19. MDM2 ENSGALG00000009942 397 0.9 - - 0.900 - - - - - - - MDM2 proto-oncogene [Source:NCBI gene;Acc:395609]
20. PSMD4 ENSGALG00000028505 16 0.898 - - 0.898 - - - - - - - proteasome 26S subunit, non-ATPase 4 [Source:NCBI gene;Acc:100216364]
21. SATB2 ENSGALG00000008135 347 0.891 - - 0.891 - - - - - - - SATB homeobox 2 [Source:NCBI gene;Acc:424063]
22. DNAH7 ENSGALG00000007841 32 0.889 - - 0.889 - - - - - - - dynein axonemal heavy chain 7 [Source:HGNC Symbol;Acc:HGNC:18661]
23. LIN54 ENSGALG00000011133 75 0.886 - - 0.886 - - - - - - - lin-54 DREAM MuvB core complex component [Source:HGNC Symbol;Acc:HGNC:25397]
24. FNDC7 ENSGALG00000001983 24 0.885 - - 0.885 - - - - - - - fibronectin type III domain containing 7 [Source:HGNC Symbol;Acc:HGNC:26668]
25. BTBD6 ENSGALG00000033813 163 0.879 - - 0.879 - - - - - - - BTB domain containing 6 [Source:HGNC Symbol;Acc:HGNC:19897]
26. CLIC3 ENSGALG00000038789 233 0.876 - - 0.876 - - - - - - - chloride intracellular channel 3 [Source:HGNC Symbol;Acc:HGNC:2064]
27. IMPG2 ENSGALG00000015322 74 0.871 - - 0.871 - - - - - - - interphotoreceptor matrix proteoglycan 2 [Source:NCBI gene;Acc:418393]
28. MMP9 ENSGALG00000006992 78 0.869 - - 0.869 - - - - - - - matrix metallopeptidase 9 [Source:NCBI gene;Acc:395387]
29. HTR2C ENSGALG00000005853 90 0.866 - - 0.866 - - - - - - - Gallus gallus 5-hydroxytryptamine receptor 2C (HTR2C), mRNA. [Source:RefSeq mRNA;Acc:NM_001318421]
30. ENSGALG00000006278 ENSGALG00000006278 202 0.866 - - 0.866 - - - - - - -
31. ENSGALG00000021882 ENSGALG00000021882 63 0.866 - - 0.866 - - - - - - -
32. CYP3A4 ENSGALG00000004436 75 0.865 - - 0.865 - - - - - - - Gallus gallus cytochrome P450 family 3 subfamily A member 4 (CYP3A4), mRNA. [Source:RefSeq mRNA;Acc:NM_001329508]
33. B3GNTL1 ENSGALG00000001433 22 0.864 - - 0.864 - - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 [Source:HGNC Symbol;Acc:HGNC:21727]
34. PRKCZ ENSGALG00000001270 12 0.862 - - 0.862 - - - - - - - protein kinase C zeta [Source:HGNC Symbol;Acc:HGNC:9412]
35. XYLT1 ENSGALG00000006757 169 0.86 - - 0.860 - - - - - - - xylosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:15516]
36. SAMSN1 ENSGALG00000040926 88 0.857 - - 0.857 - - - - - - - SAM domain, SH3 domain and nuclear localization signals 1 [Source:NCBI gene;Acc:418470]
37. REEP2 ENSGALG00000017365 338 0.854 - - 0.854 - - - - - - - receptor accessory protein 2 [Source:HGNC Symbol;Acc:HGNC:17975]
38. SLCO4C1 ENSGALG00000026768 30 0.853 - - 0.853 - - - - - - - solute carrier organic anion transporter family member 4C1, transcript variant X4
39. TSPAN18 ENSGALG00000036901 14 0.85 - - 0.850 - - - - - - - tetraspanin 18 [Source:NCBI gene;Acc:395586]
40. MATN2 44 0.849 - - - 0.849 - - - - - - matrilin 2, transcript variant X9
41. ZBTB21 ENSGALG00000016147 13 0.846 - - 0.846 - - - - - - - zinc finger and BTB domain containing 21 [Source:HGNC Symbol;Acc:HGNC:13083]
42. SUSD4 ENSGALG00000009388 48 0.842 - - 0.842 - - - - - - - sushi domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25470]
43. gga-mir-2954 ENSGALG00000026107 462 0.84 - - 0.840 - - - - - - - gga-mir-2954 [Source:miRBase;Acc:MI0013634]
44. LCOR ENSGALG00000028512 30 0.84 - - 0.840 - - - - - - - ligand dependent nuclear receptor corepressor, transcript variant X16
45. PDCD6IP ENSGALG00000033500 580 0.837 - - 0.837 - - - - - - - programmed cell death 6 interacting protein [Source:NCBI gene;Acc:420725]
46. DSG2 ENSGALG00000015142 67 0.837 - - 0.837 - - - - - - - desmoglein 2 [Source:HGNC Symbol;Acc:HGNC:3049]
47. HNF4G ENSGALG00000042621 484 0.832 - - 0.832 - - - - - - - hepatocyte nuclear factor 4 gamma [Source:HGNC Symbol;Acc:HGNC:5026]
48. UBXN6 ENSGALG00000001146 122 0.832 - - 0.832 - - - - - - - UBX domain protein 6 [Source:HGNC Symbol;Acc:HGNC:14928]
49. CNTF ENSGALG00000026207 47 0.831 - - 0.831 - - - - - - - ciliary neurotrophic factor [Source:NCBI gene;Acc:396488]
50. LOC769139 ENSGALG00000026754 753 0.826 - - 0.826 - - - - - - - feather keratin 1-like, transcript variant X2
51. MYT1L ENSGALG00000016384 147 0.825 - - 0.825 - - - - - - - myelin transcription factor 1 like [Source:HGNC Symbol;Acc:HGNC:7623]
52. ANKRD16 ENSGALG00000008168 475 0.824 - - - 0.824 - - - - - - ankyrin repeat domain 16 [Source:NCBI gene;Acc:416688]
53. C1orf131 C1orf131 141 0.823 - - 0.823 - - - - - - -
54. RFESD ENSGALG00000014673 198 0.821 - - - 0.821 - - - - - - Rieske Fe-S domain containing [Source:HGNC Symbol;Acc:HGNC:29587]
55. CP ENSGALG00000030773 119 0.82 - - - 0.820 - - - - - - ceruloplasmin [Source:HGNC Symbol;Acc:HGNC:2295]
56. PLEKHJ1 ENSGALG00000000835 55 0.819 - - 0.819 - - - - - - - pleckstrin homology domain containing J1 [Source:NCBI gene;Acc:428324]
57. HTR1E ENSGALG00000015826 11 0.818 - - - 0.818 - - - - - - 5-hydroxytryptamine receptor 1E [Source:HGNC Symbol;Acc:HGNC:5291]
58. MTERFD3 MTERFD3 20 0.818 - - - 0.818 - - - - - -
59. ITGB2 ENSGALG00000007511 46 0.817 - - 0.817 - - - - - - - integrin subunit beta 2 [Source:NCBI gene;Acc:396181]
60. LOXL1 ENSGALG00000028247 672 0.817 - - 0.817 - - - - - - - lysyl oxidase like 1
61. UBE3C ENSGALG00000006461 57 0.816 - - 0.816 - - - - - - - ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
62. KIF9 ENSGALG00000005517 70 0.816 - - 0.816 - - - - - - - kinesin family member 9 [Source:HGNC Symbol;Acc:HGNC:16666]
63. DINB1 DINB1 113 0.816 - - 0.816 - - - - - - -
64. NUP160 ENSGALG00000043074 46 0.815 - - - 0.815 - - - - - - nucleoporin 160 [Source:HGNC Symbol;Acc:HGNC:18017]
65. MTMR10 85 0.815 - - 0.815 - - - - - - - myotubularin related protein 10
66. gga-mir-454 ENSGALG00000033526 22 0.814 - - - 0.814 - - - - - - gga-mir-454 [Source:miRBase;Acc:MI0006984]
67. WDR48 ENSGALG00000006052 3575 0.814 - - 0.814 - - - - - - - WD repeat domain 48 [Source:NCBI gene;Acc:420427]
68. ZDHHC8 ENSGALG00000002124 35 0.813 - - - 0.813 - - - - - - zinc finger DHHC-type containing 8 [Source:NCBI gene;Acc:416788]
69. TMEM159 ENSGALG00000027173 67 0.813 - - 0.813 - - - - - - - transmembrane protein 159 [Source:HGNC Symbol;Acc:HGNC:30136]
70. NOTCH1 ENSGALG00000002375 726 0.812 - - - 0.812 - - - - - - notch 1 [Source:NCBI gene;Acc:395655]
71. VEPH1 ENSGALG00000009682 51 0.812 - - - 0.812 - - - - - - ventricular zone expressed PH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25735]
72. KIAA1549 ENSGALG00000012796 60 0.809 - - 0.809 - - - - - - - KIAA1549 [Source:HGNC Symbol;Acc:HGNC:22219]
73. ENSGALG00000028652 ENSGALG00000028652 65 0.805 - - - 0.805 - - - - - -
74. TRAF2 ENSGALG00000042838 24 0.805 - - - 0.805 - - - - - - TNF receptor associated factor 2 [Source:HGNC Symbol;Acc:HGNC:12032]
75. ABHD14A 174 0.805 - - 0.805 - - - - - - - abhydrolase domain containing 14A
76. RHOV ENSGALG00000028047 75 0.804 - - 0.804 - - - - - - - ras homolog family member V [Source:HGNC Symbol;Acc:HGNC:18313]
77. SMCR8 ENSGALG00000024082 44 0.804 - - - 0.804 - - - - - - Smith-Magenis syndrome chromosome region, candidate 8 [Source:HGNC Symbol;Acc:HGNC:17921]
78. OXGR1 ENSGALG00000016891 13 0.803 - - - 0.803 - - - - - - oxoglutarate receptor 1
79. ACOX2 ENSGALG00000007132 47 0.802 - - - 0.802 - - - - - - acyl-CoA oxidase 2 [Source:HGNC Symbol;Acc:HGNC:120]
80. SUPT20H ENSGALG00000017047 59 0.802 - - 0.802 - - - - - - - SPT20 homolog, SAGA complex component [Source:NCBI gene;Acc:418896]
81. AFTPH ENSGALG00000008828 21 0.802 - - 0.802 - - - - - - - aftiphilin [Source:HGNC Symbol;Acc:HGNC:25951]
82. BEGAIN ENSGALG00000011236 35 0.801 - - - 0.801 - - - - - - brain enriched guanylate kinase associated [Source:HGNC Symbol;Acc:HGNC:24163]
83. RGS16 ENSGALG00000033535 139 0.799 - - - 0.799 - - - - - - regulator of G-protein signaling 16 [Source:NCBI gene;Acc:424409]
84. PM20D2 ENSGALG00000015779 1301 0.799 - - 0.799 - - - - - - - peptidase M20 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21408]
85. RNF170 ENSGALG00000015386 296 0.796 - - 0.796 - - - - - - - ring finger protein 170 [Source:NCBI gene;Acc:427296]
86. KITLG ENSGALG00000011206 71 0.794 - - - 0.794 - - - - - - KIT ligand [Source:NCBI gene;Acc:396028]
87. MGST2 ENSGALG00000009803 427 0.793 - - 0.793 - - - - - - - microsomal glutathione S-transferase 2 [Source:HGNC Symbol;Acc:HGNC:7063]
88. CEP128 ENSGALG00000010562 133 0.793 - - 0.793 - - - - - - - centrosomal protein 128 [Source:HGNC Symbol;Acc:HGNC:20359]
89. OGDHL ENSGALG00000002266 57 0.79 - - - 0.790 - - - - - - oxoglutarate dehydrogenase like [Source:NCBI gene;Acc:423618]
90. DMRT1 ENSGALG00000010160 425 0.788 - - - 0.788 - - - - - - doublesex and mab-3 related transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:2934]
91. CYP17A1 ENSGALG00000008121 227 0.787 - - 0.787 - - - - - - - cytochrome P450 family 17 subfamily A member 1 [Source:NCBI gene;Acc:425056]
92. GTPBP10 ENSGALG00000009035 1397 0.786 - - - - - - - 0.786 - - GTP binding protein 10 [Source:HGNC Symbol;Acc:HGNC:25106]
93. RICTOR ENSGALG00000003775 247 0.785 - - 0.785 - - - - - - - RPTOR independent companion of MTOR complex 2 [Source:HGNC Symbol;Acc:HGNC:28611]
94. FAM105B 56 0.785 - - 0.785 - - - - - - - family with sequence similarity 105, member B, transcript variant X18
95. DAB2IP ENSGALG00000001419 100 0.785 - - 0.785 - - - - - - - DAB2 interacting protein [Source:HGNC Symbol;Acc:HGNC:17294]
96. TMEM150C ENSGALG00000011175 218 0.785 - - 0.785 - - - - - - - transmembrane protein 150C [Source:HGNC Symbol;Acc:HGNC:37263]
97. MXD3 ENSGALG00000029109, ENSGALG00000046263 920 0.783 - - - - - 0.783 - - - - MAX dimerization protein 3, transcript variant X2
98. CARS ENSGALG00000006427 7660 0.782 - - 0.782 - - - - - - - cysteinyl-tRNA synthetase [Source:NCBI gene;Acc:423086]
99. OTUD7B ENSGALG00000013348 38 0.781 - - - 0.781 - - - - - - OTU deubiquitinase 7B [Source:HGNC Symbol;Acc:HGNC:16683]
100. MOB1B ENSGALG00000011573 567 0.78 - - 0.780 - - - - - - - MOB kinase activator 1B [Source:HGNC Symbol;Acc:HGNC:29801]

There are 145 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA