Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for POLR3F

Gene Name Gene ID Reads Annotation
POLR3F ENSGALG00000008749 5645 RNA polymerase III subunit F [Source:NCBI gene;Acc:416723]











Genes with expression patterns similar to POLR3F

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. POLR3F ENSGALG00000008749 5645 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA polymerase III subunit F [Source:NCBI gene;Acc:416723]
2. MRPL23 ENSGALG00000006561 13737 1.877 - - - - 0.977 - 0.900 - - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]
3. BAG4 ENSGALG00000003254 5751 1.819 - - - - 0.986 - 0.833 - - - BCL2 associated athanogene 4 [Source:HGNC Symbol;Acc:HGNC:940]
4. ENSGALG00000011687 ENSGALG00000011687 4553 1.797 - - - - 0.990 - - - 0.807 -
5. ENSGALG00000014852 ENSGALG00000014852 15288 1.775 - - - - 0.970 - 0.805 - - -
6. WDR82 ENSGALG00000025904 4783 1.765 - - - - 0.983 - 0.782 - - - WD repeat domain 82 [Source:NCBI gene;Acc:415942]
7. POLR2B ENSGALG00000011387 4864 1.75 - - - - 0.977 - - 0.773 - - RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
8. AATF ENSGALG00000005420 6501 1.735 - - - - 0.978 - 0.757 - - - apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
9. FBXO9 ENSGALG00000016320 9600 1.715 - - - - 0.978 - 0.737 - - - F-box protein 9 [Source:NCBI gene;Acc:421895]
10. STK3 ENSGALG00000032850 6339 1.7 - - - - 0.983 - - 0.717 - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
11. COIL ENSGALG00000003158 7806 1.686 - - - - 0.986 - - 0.700 - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
12. TMEM165 ENSGALG00000027886 5468 1.68 - - - - 0.980 - - 0.700 - - transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]
13. PTPN12 9302 1.677 - - - - 0.958 - 0.719 - - - protein tyrosine phosphatase, non-receptor type 12
14. REEP5 ENSGALG00000023157 6282 1.671 - - - - 0.970 - 0.701 - - - receptor accessory protein 5 [Source:NCBI gene;Acc:770021]
15. CASP6 ENSGALG00000012186 6639 1.654 - - - - - - 0.859 0.795 - - caspase 6 [Source:NCBI gene;Acc:395477]
16. PLEKHA5 ENSGALG00000013134 3656 1.648 - - - - - - 0.823 0.825 - - pleckstrin homology domain containing A5 [Source:HGNC Symbol;Acc:HGNC:30036]
17. ABHD13 ENSGALG00000016853 4975 1.633 - - - - - - 0.823 0.810 - - abhydrolase domain containing 13 [Source:NCBI gene;Acc:418763]
18. DNTTIP2 4528 1.63 - - - - - - 0.848 0.782 - - deoxynucleotidyltransferase, terminal, interacting protein 2, transcript variant X3
19. FREM3 ENSGALG00000020561 1824 1.627 - - - - - - 0.852 - 0.775 - FRAS1 related extracellular matrix 3
20. TMEM14A ENSGALG00000019894 5279 1.627 - - - - - - 0.871 0.756 - - transmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]
21. NNT ENSGALG00000014869 8496 1.617 - - - - - - 0.858 0.759 - - nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863]
22. C1GALT1 ENSGALG00000009752 7148 1.61 - - - - - - 0.881 0.729 - - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Source:NCBI gene;Acc:420575]
23. FAM53A ENSGALG00000015713 3795 1.597 - - - - 0.818 - 0.779 - - - family with sequence similarity 53 member A [Source:NCBI gene;Acc:378905]
24. WWC3 ENSGALG00000034834 9392 1.594 - - - - - - 0.844 0.750 - - WWC family member 3 [Source:HGNC Symbol;Acc:HGNC:29237]
25. MYEOV2 MYEOV2 5155 1.594 - - - - - - 0.875 0.719 - -
26. CCDC132 CCDC132 2632 1.583 - - - - - - 0.805 0.778 - -
27. DDX42 ENSGALG00000000581 8780 1.583 - - - - - - 0.882 0.701 - - DEAD-box helicase 42 [Source:NCBI gene;Acc:419959]
28. CEP70 ENSGALG00000012087 7992 1.581 - - - - 0.812 - - 0.769 - - centrosomal protein 70 [Source:HGNC Symbol;Acc:HGNC:29972]
29. CALCOCO2 ENSGALG00000001525 3121 1.571 - - - - - - 0.830 - 0.741 - calcium binding and coiled-coil domain 2 [Source:HGNC Symbol;Acc:HGNC:29912]
30. AP1AR ENSGALG00000028807 2398 1.554 - - - - - - 0.845 0.709 - - adaptor related protein complex 1 associated regulatory protein [Source:HGNC Symbol;Acc:HGNC:28808]
31. ATP5A1 ATP5A1 32367 1.552 - - - - 0.798 - - 0.754 - -
32. ANAPC16 ENSGALG00000004410 18001 1.541 - - - - - - 0.757 0.784 - - anaphase promoting complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:26976]
33. CINP ENSGALG00000011372 2366 1.528 - - - - - - 0.814 0.714 - - cyclin dependent kinase 2 interacting protein [Source:NCBI gene;Acc:423467]
34. LONP2 ENSGALG00000003942 3380 1.527 - - - - - - 0.805 0.722 - - lon peptidase 2, peroxisomal [Source:NCBI gene;Acc:415740]
35. WWC1 ENSGALG00000001826 4666 1.517 - - - - - - 0.790 0.727 - - WW and C2 domain containing 1 [Source:NCBI gene;Acc:416167]
36. MRPS22 ENSGALG00000005367 8307 1.513 - - - - - - 0.762 0.751 - - mitochondrial ribosomal protein S22 [Source:HGNC Symbol;Acc:HGNC:14508]
37. DJ-1 DJ-1 13462 1.504 - - - - - - 0.775 0.729 - -
38. MAEA ENSGALG00000013310 13230 1.503 - - - - 0.716 - - 0.787 - - macrophage erythroblast attacher [Source:NCBI gene;Acc:426024]
39. C1H11ORF73 C1H11ORF73 10071 1.495 - - - - - - 0.765 0.730 - -
40. MTAP ENSGALG00000008174 10976 1.489 - - - - - - 0.715 0.774 - - methylthioadenosine phosphorylase [Source:NCBI gene;Acc:431261]
41. GSKIP ENSGALG00000011088 3421 1.484 - - - - - - 0.770 0.714 - - GSK3B interacting protein [Source:NCBI gene;Acc:423442]
42. RHOGL ENSGALG00000005464, ENSGALG00000005475 5791 1.478 - - - - - - 0.753 0.725 - - rho-related GTP-binding protein RhoG-like [Source:NCBI gene;Acc:422207]
43. MPP1 ENSGALG00000005071 3865 1.43 - - - - - - 0.702 0.728 - - membrane palmitoylated protein 1 [Source:NCBI gene;Acc:422197]
44. YY1 ENSGALG00000017388 1933 0.991 - - - - 0.991 - - - - - YY1 transcription factor [Source:NCBI gene;Acc:423455]
45. ZBTB10 ENSGALG00000034376 3271 0.99 - - - - 0.990 - - - - - zinc finger and BTB domain containing 10 [Source:HGNC Symbol;Acc:HGNC:30953]
46. REST 2394 0.99 - - - - 0.990 - - - - - RE1 silencing transcription factor
47. SSPN ENSGALG00000014042 638 0.99 - - - - 0.990 - - - - - sarcospan [Source:HGNC Symbol;Acc:HGNC:11322]
48. CTSZ ENSGALG00000007462 630 0.989 - - - - 0.989 - - - - - cathepsin Z [Source:HGNC Symbol;Acc:HGNC:2547]
49. ELL2 ENSGALG00000014678 1111 0.989 - - - - 0.989 - - - - - elongation factor for RNA polymerase II 2 [Source:HGNC Symbol;Acc:HGNC:17064]
50. XPO7 ENSGALG00000001838 1875 0.989 - - - - 0.989 - - - - - exportin 7 [Source:NCBI gene;Acc:426925]
51. EAPP ENSGALG00000010007 5080 0.989 - - - - 0.989 - - - - - E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
52. IGF1R ENSGALG00000040651 772 0.989 - - - - 0.989 - - - - - insulin like growth factor 1 receptor [Source:NCBI gene;Acc:395889]
53. DDX55 ENSGALG00000003298 2315 0.988 - - - - 0.988 - - - - - DEAD-box helicase 55 [Source:NCBI gene;Acc:416820]
54. TCP11L1 ENSGALG00000011688 2427 0.988 - - - - 0.988 - - - - - t-complex 11 like 1 [Source:NCBI gene;Acc:421594]
55. DNAJC12 ENSGALG00000002769 1418 0.987 - - - - 0.987 - - - - - DnaJ heat shock protein family (Hsp40) member C12 [Source:NCBI gene;Acc:423647]
56. CZH9ORF41 CZH9ORF41 3492 0.987 - - - - 0.987 - - - - -
57. SIRT1 ENSGALG00000002761 9028 0.987 - - - - 0.987 - - - - - sirtuin 1 [Source:NCBI gene;Acc:423646]
58. CBWD1 ENSGALG00000010147 2765 0.986 - - - - 0.986 - - - - - COBW domain containing 1 [Source:NCBI gene;Acc:427347]
59. KNOP1 ENSGALG00000002042 6251 0.986 - - - - 0.986 - - - - - lysine-rich nucleolar protein 1, transcript variant X1
60. TLCD1 ENSGALG00000003973 17569 0.986 - - - - 0.986 - - - - - TLC domain containing 1 [Source:NCBI gene;Acc:417575]
61. NAP1L1 ENSGALG00000010238 14506 0.986 - - - - 0.986 - - - - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
62. CDC42SE2 ENSGALG00000027258 4725 0.985 - - - - 0.985 - - - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
63. MRPS27 ENSGALG00000015002 6541 0.985 - - - - 0.985 - - - - - mitochondrial ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:14512]
64. FERMT2 ENSGALG00000012425 5480 0.985 - - - - 0.985 - - - - - fermitin family member 2 [Source:HGNC Symbol;Acc:HGNC:15767]
65. PLAA ENSGALG00000001782 5459 0.985 - - - - 0.985 - - - - - phospholipase A2 activating protein [Source:HGNC Symbol;Acc:HGNC:9043]
66. TLK2 ENSGALG00000000410 4690 0.985 - - - - 0.985 - - - - - tousled like kinase 2 [Source:HGNC Symbol;Acc:HGNC:11842]
67. FH ENSGALG00000013165 13669 0.985 - - - - 0.985 - - - - - fumarate hydratase [Source:NCBI gene;Acc:420969]
68. ATG5 ENSGALG00000015387 7752 0.984 - - - - 0.984 - - - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
69. TRAPPC12 ENSGALG00000016387 2593 0.984 - - - - 0.984 - - - - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
70. RABEP1 ENSGALG00000001737 2650 0.983 - - - - 0.983 - - - - - rabaptin, RAB GTPase binding effector protein 1 [Source:NCBI gene;Acc:395930]
71. SSR2 ENSGALG00000000764 32190 0.983 - - - - 0.983 - - - - - signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
72. MKI67 ENSGALG00000025996 28136 0.983 - - - - 0.983 - - - - - marker of proliferation Ki-67, transcript variant X3
73. COMMD8 ENSGALG00000026279 13509 0.982 - - - - 0.982 - - - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
74. LATS2 4776 0.982 - - - - 0.982 - - - - - large tumor suppressor kinase 2
75. DRAXIN ENSGALG00000004631 3122 0.981 - - - - 0.981 - - - - - dorsal inhibitory axon guidance protein [Source:NCBI gene;Acc:419492]
76. GPN3 ENSGALG00000003807 6320 0.981 - - - - 0.981 - - - - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
77. SH2D3C ENSGALG00000005036 5101 0.98 - - - - 0.980 - - - - - SH2 domain containing 3C [Source:HGNC Symbol;Acc:HGNC:16884]
78. NFASC ENSGALG00000031776 4264 0.979 - - - - 0.979 - - - - - neurofascin [Source:NCBI gene;Acc:419824]
79. CSNK1G1 ENSGALG00000030812 31618 0.978 - - - - 0.978 - - - - - casein kinase 1 gamma 1 [Source:NCBI gene;Acc:415328]
80. IGBP1 ENSGALG00000044628 9200 0.977 - - - - 0.977 - - - - - immunoglobulin (CD79A) binding protein 1, transcript variant X3
81. MRPS25 ENSGALG00000008506 12131 0.977 - - - - 0.977 - - - - - mitochondrial ribosomal protein S25 [Source:NCBI gene;Acc:416129]
82. SHROOM2 ENSGALG00000030802 4517 0.977 - - - - 0.977 - - - - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
83. TK2 ENSGALG00000034216 5394 0.976 - - - - 0.976 - - - - - thymidine kinase 2, mitochondrial [Source:NCBI gene;Acc:427551]
84. PUM1 ENSGALG00000042598 9392 0.976 - - - - 0.976 - - - - - pumilio RNA binding family member 1 [Source:NCBI gene;Acc:419554]
85. SAR1B ENSGALG00000038753 6493 0.971 - - - - 0.971 - - - - - secretion associated Ras related GTPase 1B [Source:NCBI gene;Acc:416314]
86. PSPC1 ENSGALG00000017142 13036 0.97 - - - - 0.970 - - - - - paraspeckle component 1 [Source:NCBI gene;Acc:418955]
87. IGDCC4 ENSGALG00000007410 5457 0.968 - - - - 0.968 - - - - - immunoglobulin superfamily DCC subclass member 4 [Source:HGNC Symbol;Acc:HGNC:13770]
88. RAB12 ENSGALG00000033608 14160 0.968 - - - - 0.968 - - - - - RAB12, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:31332]
89. EXO1 ENSGALG00000010748 7572 0.968 - - - - 0.968 - - - - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
90. RANGAP1 ENSGALG00000011966 20170 0.967 - - - - 0.967 - - - - - Ran GTPase activating protein 1 [Source:NCBI gene;Acc:417997]
91. PTTG1 17936 0.967 - - - - 0.967 - - - - - pituitary tumor-transforming 1, transcript variant X1
92. SFSWAP ENSGALG00000002487 9977 0.96 - - - - 0.960 - - - - - splicing factor SWAP [Source:HGNC Symbol;Acc:HGNC:10790]
93. STRAP ENSGALG00000013092 13100 0.96 - - - - 0.960 - - - - - serine/threonine kinase receptor associated protein [Source:NCBI gene;Acc:418175]
94. PCBP4 ENSGALG00000027695 7937 0.956 - - - - 0.956 - - - - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
95. GFPT1 ENSGALG00000036391 14025 0.954 - - - - 0.954 - - - - - glutamine--fructose-6-phosphate transaminase 1 [Source:NCBI gene;Acc:419514]
96. SKP2 ENSGALG00000003547 14637 0.953 - - - - 0.953 - - - - - S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]
97. NOP58 ENSGALG00000008454 34630 0.952 - - - - 0.952 - - - - - NOP58 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:29926]
98. OGT ENSGALG00000005425 31074 0.952 - - - - 0.952 - - - - - O-linked N-acetylglucosamine (GlcNAc) transferase [Source:HGNC Symbol;Acc:HGNC:8127]
99. LARP1 ENSGALG00000040109 14808 0.952 - - - - 0.952 - - - - - La ribonucleoprotein domain family member 1 [Source:HGNC Symbol;Acc:HGNC:29531]
100. RCAN3 ENSGALG00000004282 7778 0.952 - - - - 0.952 - - - - - RCAN family member 3 [Source:NCBI gene;Acc:419698]

There are 634 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA