Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for POLR3E

Gene Name Gene ID Reads Annotation
POLR3E ENSGALG00000007008 4010 RNA polymerase III subunit E [Source:HGNC Symbol;Acc:HGNC:30347]











Genes with expression patterns similar to POLR3E

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. POLR3E ENSGALG00000007008 4010 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - RNA polymerase III subunit E [Source:HGNC Symbol;Acc:HGNC:30347]
2. GFM1 ENSGALG00000009634 7213 1.728 - - - - - - 0.940 0.788 - - G elongation factor mitochondrial 1 [Source:HGNC Symbol;Acc:HGNC:13780]
3. COPE ENSGALG00000003153 19444 1.644 - - - - - - 0.925 0.719 - - coatomer protein complex subunit epsilon [Source:NCBI gene;Acc:420117]
4. XPA ENSGALG00000028998 8621 1.624 - - - - - - 0.917 0.707 - - XPA, DNA damage recognition and repair factor [Source:NCBI gene;Acc:395659]
5. PSMB3 ENSGALG00000001597 22588 1.541 - - - - - - 0.775 0.766 - - proteasome subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:9540]
6. ATL2 ENSGALG00000037289 7926 1.472 - - - - - - 0.722 0.750 - - atlastin GTPase 2 [Source:HGNC Symbol;Acc:HGNC:24047]
7. KCTD9 ENSGALG00000000275 3455 0.987 - - - - - - 0.987 - - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
8. BFAR ENSGALG00000003111 1778 0.986 - - - - - - 0.986 - - - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
9. IRAK2 ENSGALG00000008407 5934 0.984 - - - - - - 0.984 - - - interleukin 1 receptor associated kinase 2 [Source:NCBI gene;Acc:416118]
10. NDUFB8 ENSGALG00000005704 5781 0.984 - - - - - - 0.984 - - - NADH:ubiquinone oxidoreductase subunit B8 [Source:NCBI gene;Acc:423763]
11. PNO1 ENSGALG00000009093 11153 0.984 - - - - - - 0.984 - - - partner of NOB1 homolog [Source:NCBI gene;Acc:769547]
12. AP2B1 ENSGALG00000042125 13229 0.983 - - - - - - 0.983 - - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
13. RRN3 ENSGALG00000041989 3934 0.983 - - - - - - 0.983 - - - RRN3 homolog, RNA polymerase I transcription factor [Source:NCBI gene;Acc:416414]
14. ABCD3 ENSGALG00000005647 4844 0.983 - - - - - - 0.983 - - - ATP binding cassette subfamily D member 3 [Source:NCBI gene;Acc:424487]
15. METTL11A METTL11A 11876 0.981 - - - - - - 0.981 - - -
16. AK6 ENSGALG00000020534 4791 0.981 - - - - - - 0.981 - - - adenylate kinase 6 [Source:NCBI gene;Acc:425215]
17. DNA2 ENSGALG00000004037 5426 0.98 - - - - - - 0.980 - - - DNA replication helicase/nuclease 2 [Source:NCBI gene;Acc:423688]
18. gga-mir-6643 ENSGALG00000027935 4442 0.98 - - - - - - 0.980 - - - gga-mir-6643 [Source:miRBase;Acc:MI0022462]
19. CLCN3 ENSGALG00000009674 3704 0.98 - - - - - - 0.980 - - - chloride voltage-gated channel 3 [Source:HGNC Symbol;Acc:HGNC:2021]
20. TBCCD1 ENSGALG00000006566 2696 0.98 - - - - - - 0.980 - - - TBCC domain containing 1 [Source:NCBI gene;Acc:424869]
21. ARHGAP29 ENSGALG00000005683 3622 0.979 - - - - - - 0.979 - - - Rho GTPase activating protein 29 [Source:NCBI gene;Acc:424488]
22. DNAJA3 ENSGALG00000007821 3963 0.979 - - - - - - 0.979 - - - DnaJ heat shock protein family (Hsp40) member A3 [Source:HGNC Symbol;Acc:HGNC:11808]
23. NPHP3 ENSGALG00000034586 1465 0.979 - - - - - - 0.979 - - - nephrocystin 3, transcript variant X1
24. RILPL2 ENSGALG00000003321 5632 0.978 - - - - - - 0.978 - - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
25. HACE1 ENSGALG00000015415 1194 0.978 - - - - - - 0.978 - - - HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421788]
26. MOB2 ENSGALG00000030499 3658 0.977 - - - - - - 0.977 - - - MOB kinase activator 2 [Source:HGNC Symbol;Acc:HGNC:24904]
27. PPP3R1 ENSGALG00000023648 3417 0.977 - - - - - - 0.977 - - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
28. ENSGALG00000002923 ENSGALG00000002923 2233 0.976 - - - - - - 0.976 - - -
29. SLC1A1 ENSGALG00000010187 637 0.976 - - - - - - 0.976 - - - solute carrier family 1 member 1 [Source:HGNC Symbol;Acc:HGNC:10939]
30. RBM12B ENSGALG00000035129 4314 0.976 - - - - - - 0.976 - - - RNA binding motif protein 12B [Source:NCBI gene;Acc:420223]
31. MAP1LC3A ENSGALG00000038721 2230 0.975 - - - - - - 0.975 - - - microtubule associated protein 1 light chain 3 alpha
32. CAMKK2 ENSGALG00000040131 2795 0.975 - - - - - - 0.975 - - - calcium/calmodulin dependent protein kinase kinase 2, transcript variant X9
33. ENSGALG00000027854 ENSGALG00000027854 5007 0.975 - - - - - - 0.975 - - -
34. SHQ1 ENSGALG00000007798 1982 0.975 - - - - - - 0.975 - - - SHQ1, H/ACA ribonucleoprotein assembly factor [Source:HGNC Symbol;Acc:HGNC:25543]
35. LEPROTL1 ENSGALG00000024482 4251 0.975 - - - - - - 0.975 - - - leptin receptor overlapping transcript-like 1
36. MSRA ENSGALG00000028032 2607 0.974 - - - - - - 0.974 - - - methionine sulfoxide reductase A [Source:HGNC Symbol;Acc:HGNC:7377]
37. EI24 ENSGALG00000038097 24081 0.974 - - - - - - 0.974 - - - EI24, autophagy associated transmembrane protein [Source:NCBI gene;Acc:419711]
38. ARID4A ENSGALG00000012037 8554 0.973 - - - - - - 0.973 - - - AT-rich interaction domain 4A [Source:NCBI gene;Acc:423541]
39. E2F6 ENSGALG00000016454 4747 0.973 - - - - - - 0.973 - - - E2F transcription factor 6 [Source:NCBI gene;Acc:421943]
40. OGFOD1 6926 0.972 - - - - - - 0.972 - - - 2-oxoglutarate and iron dependent oxygenase domain containing 1
41. POPDC3 ENSGALG00000027420 700 0.972 - - - - - - 0.972 - - - popeye domain containing 3 [Source:NCBI gene;Acc:395434]
42. KLHL29 ENSGALG00000016495 582 0.972 - - - - - - 0.972 - - - kelch like family member 29 [Source:HGNC Symbol;Acc:HGNC:29404]
43. ATN1 ENSGALG00000014554 3270 0.972 - - - - - - 0.972 - - - atrophin 1 [Source:HGNC Symbol;Acc:HGNC:3033]
44. MYST2 MYST2 8078 0.972 - - - - - - 0.972 - - -
45. INTS10 ENSGALG00000010130 6320 0.972 - - - - - - 0.972 - - - integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
46. AKAP7 ENSGALG00000029794 3287 0.972 - - - - - - 0.972 - - - A-kinase anchoring protein 7 [Source:HGNC Symbol;Acc:HGNC:377]
47. LMNB2 ENSGALG00000000470 4364 0.971 - - - - - - 0.971 - - - lamin B2 [Source:NCBI gene;Acc:396222]
48. UBAC1 ENSGALG00000042564 598 0.971 - - - - - - 0.971 - - - UBA domain containing 1 [Source:NCBI gene;Acc:427754]
49. NCOA4 ENSGALG00000002066 10544 0.97 - - - - - - 0.970 - - - nuclear receptor coactivator 4 [Source:NCBI gene;Acc:423615]
50. MTFMT ENSGALG00000007353 805 0.97 - - - - - - 0.970 - - - mitochondrial methionyl-tRNA formyltransferase [Source:HGNC Symbol;Acc:HGNC:29666]
51. CETN2 ENSGALG00000007510 1688 0.97 - - - - - - 0.970 - - - centrin 2 [Source:NCBI gene;Acc:422303]
52. GCC2 ENSGALG00000016806 1085 0.97 - - - - - - 0.970 - - - GRIP and coiled-coil domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23218]
53. NDUFA9 ENSGALG00000017282 14358 0.97 - - - - - - 0.970 - - - NADH:ubiquinone oxidoreductase subunit A9 [Source:NCBI gene;Acc:419039]
54. EIF4G3 ENSGALG00000010084 5881 0.97 - - - - - - 0.970 - - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
55. MED6 ENSGALG00000029743 9414 0.97 - - - - - - 0.970 - - - mediator complex subunit 6 [Source:NCBI gene;Acc:426282]
56. SDF4 ENSGALG00000001872 6382 0.969 - - - - - - 0.969 - - - stromal cell derived factor 4 [Source:NCBI gene;Acc:419423]
57. SREBF2 ENSGALG00000041687 4519 0.968 - - - - - - 0.968 - - - sterol regulatory element binding transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11290]
58. YBX1 ENSGALG00000004848 20992 0.968 - - - - - - 0.968 - - - Y-box binding protein 1 [Source:NCBI gene;Acc:386575]
59. DISP1 3281 0.968 - - - - - - 0.968 - - - dispatched RND transporter family member 1, transcript variant X3
60. SEMA4B ENSGALG00000008297 11202 0.968 - - - - - - 0.968 - - - semaphorin 4B [Source:HGNC Symbol;Acc:HGNC:10730]
61. BCAS1 ENSGALG00000007796 379 0.968 - - - - - - 0.968 - - - breast carcinoma amplified sequence 1 [Source:HGNC Symbol;Acc:HGNC:974]
62. SDCCAG8 ENSGALG00000010713 311 0.968 - - - - - - 0.968 - - - serologically defined colon cancer antigen 8, transcript variant X5
63. RBBP6 ENSGALG00000006043 9708 0.967 - - - - - - 0.967 - - - RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
64. H2AFY_1 ENSGALG00000040141 4895 0.967 - - - - - - 0.967 - - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
65. LATS2 4776 0.967 - - - - - - 0.967 - - - large tumor suppressor kinase 2
66. TM9SF3 ENSGALG00000005534 15290 0.967 - - - - - - 0.967 - - - transmembrane 9 superfamily member 3
67. ATE1 ENSGALG00000009502 3751 0.966 - - - - - - 0.966 - - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
68. THOC2 ENSGALG00000008507 9501 0.963 - - - - - - 0.963 - - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
69. SCRN1 ENSGALG00000011176 3783 0.962 - - - - - - 0.962 - - - secernin 1 [Source:HGNC Symbol;Acc:HGNC:22192]
70. LACTB2 ENSGALG00000038745 3460 0.959 - - - - - - 0.959 - - - lactamase beta 2 [Source:NCBI gene;Acc:420178]
71. BPTF ENSGALG00000038222 7521 0.958 - - - - - - 0.958 - - - bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]
72. MOB1B ENSGALG00000011573 567 0.956 - - - - - - 0.956 - - - MOB kinase activator 1B [Source:HGNC Symbol;Acc:HGNC:29801]
73. TMEM108 ENSGALG00000036412 2903 0.956 - - - - - - 0.956 - - - transmembrane protein 108 [Source:HGNC Symbol;Acc:HGNC:28451]
74. RPA1 ENSGALG00000003072 8023 0.954 - - - - - - 0.954 - - - replication protein A1 [Source:NCBI gene;Acc:417563]
75. IMPACT ENSGALG00000015093 1334 0.952 - - - - - - 0.952 - - - impact RWD domain protein [Source:HGNC Symbol;Acc:HGNC:20387]
76. POR ENSGALG00000002053 5223 0.952 - - - - - - 0.952 - - - cytochrome p450 oxidoreductase [Source:NCBI gene;Acc:417520]
77. GCLM ENSGALG00000005782 15789 0.952 - - - - - - 0.952 - - - glutamate-cysteine ligase modifier subunit [Source:NCBI gene;Acc:424492]
78. SOD2 ENSGALG00000011661 13178 0.952 - - - - - - 0.952 - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
79. MED7 ENSGALG00000003870 4244 0.951 - - - - - - 0.951 - - - mediator complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:2378]
80. SIRT1 ENSGALG00000002761 9028 0.951 - - - - - - 0.951 - - - sirtuin 1 [Source:NCBI gene;Acc:423646]
81. CCND1 ENSGALG00000007555 6715 0.947 - - - - - - 0.947 - - - cyclin D1 [Source:NCBI gene;Acc:396341]
82. TRAM1 ENSGALG00000041112 22876 0.946 - - - - - - 0.946 - - - translocation associated membrane protein 1 [Source:NCBI gene;Acc:378918]
83. CHMP7 ENSGALG00000000409 8967 0.946 - - - - - - 0.946 - - - charged multivesicular body protein 7 [Source:NCBI gene;Acc:419535]
84. BTAF1 ENSGALG00000030598 3556 0.945 - - - - - - 0.945 - - - B-TFIID TATA-box binding protein associated factor 1 [Source:HGNC Symbol;Acc:HGNC:17307]
85. XRN1 ENSGALG00000002706 4014 0.945 - - - - - - 0.945 - - - 5'-3' exoribonuclease 1 [Source:HGNC Symbol;Acc:HGNC:30654]
86. PRCP ENSGALG00000037521 4012 0.945 - - - - - - 0.945 - - - prolylcarboxypeptidase [Source:HGNC Symbol;Acc:HGNC:9344]
87. SLC25A14 ENSGALG00000004063 5574 0.945 - - - - - - 0.945 - - - solute carrier family 25 member 14 [Source:NCBI gene;Acc:422141]
88. PPIF ENSGALG00000004809 5586 0.944 - - - - - - 0.944 - - - peptidylprolyl isomerase F [Source:NCBI gene;Acc:423723]
89. MRE11A MRE11A 5754 0.944 - - - - - - 0.944 - - -
90. ARNT2 ENSGALG00000006445 7050 0.944 - - - - - - 0.944 - - - aryl hydrocarbon receptor nuclear translocator 2 [Source:HGNC Symbol;Acc:HGNC:16876]
91. UBA3 ENSGALG00000013410 6923 0.943 - - - - - - 0.943 - - - ubiquitin like modifier activating enzyme 3 [Source:HGNC Symbol;Acc:HGNC:12470]
92. HDGFL3 ENSGALG00000006036 13576 0.943 - - - - - - 0.943 - - - HDGF like 3 [Source:HGNC Symbol;Acc:HGNC:24937]
93. POLA1 ENSGALG00000016312 9440 0.943 - - - - - - 0.943 - - - DNA polymerase alpha 1, catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9173]
94. ZMYND11 ENSGALG00000006599 5740 0.942 - - - - - - 0.942 - - - zinc finger MYND-type containing 11 [Source:HGNC Symbol;Acc:HGNC:16966]
95. PSMG3 ENSGALG00000004203 11240 0.931 - - - - - - 0.931 - - - proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
96. LARP1 ENSGALG00000040109 14808 0.93 - - - - - - 0.930 - - - La ribonucleoprotein domain family member 1 [Source:HGNC Symbol;Acc:HGNC:29531]
97. SF3A3 ENSGALG00000001540 9664 0.929 - - - - - - 0.929 - - - splicing factor 3a subunit 3 [Source:HGNC Symbol;Acc:HGNC:10767]
98. ALDH4A1 ENSGALG00000042184 9432 0.929 - - - - - - 0.929 - - - aldehyde dehydrogenase 4 family member A1 [Source:NCBI gene;Acc:419467]
99. PMM2 ENSGALG00000007326 8260 0.926 - - - - - - 0.926 - - - phosphomannomutase 2 [Source:NCBI gene;Acc:427679]
100. MFGE8 ENSGALG00000006702 6976 0.924 - - - - - - 0.924 - - - milk fat globule-EGF factor 8 protein [Source:NCBI gene;Acc:415494]

There are 355 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA