Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for POLR2E

Gene Name Gene ID Reads Annotation
POLR2E ENSGALG00000002591 26405 RNA polymerase II subunit E [Source:HGNC Symbol;Acc:HGNC:9192]











Genes with expression patterns similar to POLR2E

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. POLR2E ENSGALG00000002591 26405 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA polymerase II subunit E [Source:HGNC Symbol;Acc:HGNC:9192]
2. MYBL2 ENSGALG00000003503 15875 1.71 - - - - 0.875 - - 0.835 - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
3. DENR ENSGALG00000003795 30805 1.699 - - - - 0.906 - 0.793 - - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
4. ATP5MC1 ENSGALG00000001330 37766 1.657 - - - - 0.854 - 0.803 - - - ATP synthase membrane subunit c locus 1 [Source:HGNC Symbol;Acc:HGNC:841]
5. CTU2 4818 1.639 - - - - - - 0.822 0.817 - - cytosolic thiouridylase subunit 2, transcript variant X3
6. MCM2 ENSGALG00000006037 13458 1.629 - - - - - - 0.812 - - 0.817 minichromosome maintenance complex component 2 [Source:NCBI gene;Acc:416027]
7. YARS ENSGALG00000003563 11093 1.616 - - - - 0.879 0.737 - - - - tyrosyl-tRNA synthetase [Source:NCBI gene;Acc:419666]
8. TNFRSF21 ENSGALG00000016719 2762 1.591 - - - - - - - 0.818 - 0.773 TNF receptor superfamily member 21 [Source:NCBI gene;Acc:422062]
9. CSNK2A1 ENSGALG00000006197 41409 1.581 - - - - 0.825 - - 0.756 - - casein kinase 2 alpha 1 [Source:NCBI gene;Acc:432370]
10. HSPA5 ENSGALG00000001000 40342 1.546 - - - - 0.829 0.717 - - - - heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) [Source:NCBI gene;Acc:396487]
11. TCEB3 ENSGALG00000034625 184577 1.524 - - - - 0.736 - 0.788 - - - transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
12. ACTR6 ENSGALG00000040976 31271 1.492 - - - - - 0.708 - 0.784 - - ARP6 actin-related protein 6 homolog [Source:NCBI gene;Acc:395348]
13. TMEM199 ENSGALG00000023757 10781 1.443 - - - - - - - 0.708 - 0.735 transmembrane protein 199 [Source:HGNC Symbol;Acc:HGNC:18085]
14. CHERP ENSGALG00000003824 11489 0.999 - - - - - - 0.999 - - - calcium homeostasis endoplasmic reticulum protein [Source:NCBI gene;Acc:420144]
15. MAD2L1BP ENSGALG00000027871 7835 0.952 - - - - - - - 0.952 - - MAD2L1 binding protein [Source:HGNC Symbol;Acc:HGNC:21059]
16. GTLF3B GTLF3B 5079 0.951 - - - - - - - 0.951 - -
17. UPF2 ENSGALG00000033772 9548 0.919 - - - - - - - 0.919 - - UPF2, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:17854]
18. UBE2D3 ENSGALG00000012311 39831 0.913 - - - - 0.913 - - - - - ubiquitin conjugating enzyme E2 D3 [Source:NCBI gene;Acc:422713]
19. SRP19 ENSGALG00000000218 14207 0.912 - - - - 0.912 - - - - - signal recognition particle 19 [Source:HGNC Symbol;Acc:HGNC:11300]
20. MINOS1 ENSGALG00000004039 37740 0.912 - - - - 0.912 - - - - - mitochondrial inner membrane organizing system 1 [Source:NCBI gene;Acc:419474]
21. RPL22 ENSGALG00000000719 74238 0.911 - - - - 0.911 - - - - - ribosomal protein L22 [Source:NCBI gene;Acc:373937]
22. NEK6 ENSGALG00000001118 20333 0.91 - - - - 0.910 - - - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
23. ZDHHC6 ENSGALG00000008870 16575 0.909 - - - - 0.909 - - - - - zinc finger DHHC-type containing 6 [Source:HGNC Symbol;Acc:HGNC:19160]
24. TBL1X ENSGALG00000040006 28597 0.908 - - - - 0.908 - - - - - transducin beta like 1 X-linked [Source:NCBI gene;Acc:426045]
25. PRCC ENSGALG00000040696 9346 0.906 - - - - 0.906 - - - - - proline rich mitotic checkpoint control factor [Source:HGNC Symbol;Acc:HGNC:9343]
26. NARS ENSGALG00000040506 9506 0.902 - - - - 0.902 - - - - - asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
27. CDCA7 ENSGALG00000040833 7484 0.901 - - - - 0.901 - - - - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
28. TM9SF3 ENSGALG00000005534 15290 0.9 - - - - 0.900 - - - - - transmembrane 9 superfamily member 3
29. NDUFS4 ENSGALG00000028026 25876 0.899 - - - - 0.899 - - - - - NADH:ubiquinone oxidoreductase subunit S4 [Source:HGNC Symbol;Acc:HGNC:7711]
30. Mar-05 Mar-05 6330 0.899 - - - - 0.899 - - - - -
31. KPNA2 ENSGALG00000003584 76058 0.899 - - - - 0.899 - - - - - karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
32. PSMG3 ENSGALG00000004203 11240 0.898 - - - - 0.898 - - - - - proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
33. NUP88 ENSGALG00000032280 9847 0.898 - - - - 0.898 - - - - - nucleoporin 88 [Source:HGNC Symbol;Acc:HGNC:8067]
34. NAA30 ENSGALG00000012098 4681 0.898 - - - - - - - 0.898 - - N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
35. SEPHS1 ENSGALG00000014575 10701 0.898 - - - - 0.898 - - - - - selenophosphate synthetase 1 [Source:NCBI gene;Acc:426612]
36. SPEN ENSGALG00000036932 9688 0.897 - - - - 0.897 - - - - - spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]
37. MRPL21 ENSGALG00000004362 20796 0.896 - - - - 0.896 - - - - - mitochondrial ribosomal protein L21 [Source:NCBI gene;Acc:423000]
38. PSMC1 ENSGALG00000010675 20633 0.896 - - - - 0.896 - - - - - proteasome 26S subunit, ATPase 1 [Source:NCBI gene;Acc:395804]
39. CDKN1B ENSGALG00000022980 4606 0.895 - - - - 0.895 - - - - - cyclin dependent kinase inhibitor 1B [Source:NCBI gene;Acc:374106]
40. HARS ENSGALG00000035080 11602 0.894 - - - - 0.894 - - - - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
41. DCUN1D1 ENSGALG00000008807 6545 0.894 - - - - - - - 0.894 - - defective in cullin neddylation 1 domain containing 1 [Source:NCBI gene;Acc:424963]
42. DNAJC9 ENSGALG00000002701 19249 0.893 - - - - 0.893 - - - - - DnaJ heat shock protein family (Hsp40) member C9 [Source:NCBI gene;Acc:423640]
43. PSMD3 ENSGALG00000033162 25615 0.89 - - - - 0.890 - - - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
44. HDAC8 ENSGALG00000004825 12066 0.89 - - - - 0.890 - - - - - histone deacetylase 8, transcript variant X2
45. KIF2A ENSGALG00000014737 16391 0.889 - - - - 0.889 - - - - - kinesin heavy chain member 2A [Source:NCBI gene;Acc:427156]
46. ACAT2 ENSGALG00000011659 12825 0.889 - - - - 0.889 - - - - - acetyl-CoA acetyltransferase 2 [Source:NCBI gene;Acc:421587]
47. LGMN ENSGALG00000010811 7401 0.888 - - - - 0.888 - - - - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]
48. RAD23B ENSGALG00000015540 10828 0.887 - - - - 0.887 - - - - - RAD23 homolog B, nucleotide excision repair protein [Source:HGNC Symbol;Acc:HGNC:9813]
49. GSPT1 15580 0.886 - - - - 0.886 - - - - - G1 to S phase transition 1, transcript variant X1
50. UTP6 ENSGALG00000003260 4909 0.886 - - - - 0.886 - - - - - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
51. LZIC ENSGALG00000002616 9052 0.885 - - - - 0.885 - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
52. FUNDC2 ENSGALG00000029585 9334 0.885 - - - - 0.885 - - - - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
53. UPF3B ENSGALG00000008618 12350 0.885 - - - - 0.885 - - - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
54. SH3BGR ENSGALG00000016127 2561 0.884 - - - - 0.884 - - - - - SH3 domain binding glutamate rich protein
55. CENPP ENSGALG00000004687 6707 0.884 - - - - 0.884 - - - - - centromere protein P [Source:NCBI gene;Acc:415952]
56. TAF3 ENSGALG00000006731 15569 0.884 - - - - 0.884 - - - - - TATA-box binding protein associated factor 3 [Source:NCBI gene;Acc:419107]
57. RAD51AP1 ENSGALG00000017290 3807 0.884 - - - - - - - 0.884 - - RAD51 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16956]
58. SAP30 ENSGALG00000036252 2032 0.883 - - - - 0.883 - - - - - Sin3A associated protein 30 [Source:HGNC Symbol;Acc:HGNC:10532]
59. MED21 ENSGALG00000027435 5766 0.883 - - - - 0.883 - - - - - mediator complex subunit 21 [Source:HGNC Symbol;Acc:HGNC:11473]
60. MRPL16 ENSGALG00000029419 8033 0.883 - - - - 0.883 - - - - - mitochondrial ribosomal protein L16 [Source:HGNC Symbol;Acc:HGNC:14476]
61. RAD54B ENSGALG00000043597 1699 0.882 - - - - 0.882 - - - - - RAD54 homolog B [Source:NCBI gene;Acc:395449]
62. COQ5 ENSGALG00000007185 5614 0.882 - - - - 0.882 - - - - - coenzyme Q5, methyltransferase [Source:NCBI gene;Acc:416975]
63. LOC426385 ENSGALG00000026301 2703 0.882 - - - - 0.882 - - - - - serine/threonine kinase 35-like, transcript variant X2
64. HSF2 ENSGALG00000038420 5259 0.882 - - - - 0.882 - - - - - heat shock transcription factor 2 [Source:NCBI gene;Acc:421724]
65. STK4 ENSGALG00000004098 11366 0.882 - - - - 0.882 - - - - - serine/threonine kinase 4 [Source:NCBI gene;Acc:419187]
66. SELT SELT 25524 0.882 - - - - 0.882 - - - - -
67. DGKZ ENSGALG00000008380 5389 0.882 - - - - 0.882 - - - - - diacylglycerol kinase zeta [Source:NCBI gene;Acc:423197]
68. COMMD2 ENSGALG00000028001 18981 0.882 - - - - 0.882 - - - - - COMM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24993]
69. GATC ENSGALG00000007195 8610 0.882 - - - - 0.882 - - - - - glutamyl-tRNA amidotransferase subunit C, transcript variant X2
70. SYNE1 ENSGALG00000013505 2324 0.882 - - - - 0.882 - - - - - spectrin repeat containing, nuclear envelope 1, transcript variant X3
71. BHMT ENSGALG00000004518 4700 0.881 - - - - 0.881 - - - - - betaine--homocysteine S-methyltransferase
72. PBRM1 ENSGALG00000037455 6450 0.881 - - - - 0.881 - - - - - polybromo 1 [Source:NCBI gene;Acc:396074]
73. UMPS ENSGALG00000011770 11331 0.881 - - - - 0.881 - - - - - uridine monophosphate synthetase [Source:NCBI gene;Acc:424256]
74. KIF11 ENSGALG00000030597 5528 0.88 - - - - 0.880 - - - - - kinesin family member 11 [Source:NCBI gene;Acc:423809]
75. ASAP2 ENSGALG00000016419 1393 0.88 - - - - 0.880 - - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
76. ZC3H6 ENSGALG00000008269 10353 0.879 - - - - 0.879 - - - - - zinc finger CCCH-type containing 6 [Source:NCBI gene;Acc:421230]
77. ENSGALG00000027854 ENSGALG00000027854 5007 0.879 - - - - 0.879 - - - - -
78. PHTF1 ENSGALG00000001845 3276 0.879 - - - - 0.879 - - - - - putative homeodomain transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:8939]
79. MRPS26 ENSGALG00000014118 27422 0.879 - - - - 0.879 - - - - - mitochondrial ribosomal protein S26 [Source:NCBI gene;Acc:426561]
80. PRKCI ENSGALG00000009364 11574 0.879 - - - - 0.879 - - - - - protein kinase C iota [Source:NCBI gene;Acc:424991]
81. PITHD1 ENSGALG00000003986 11470 0.879 - - - - 0.879 - - - - - PITH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25022]
82. PSMA1 ENSGALG00000006022 26724 0.878 - - - - 0.878 - - - - - proteasome subunit alpha 1 [Source:NCBI gene;Acc:395874]
83. DLL1 ENSGALG00000011182 1613 0.878 - - - - 0.878 - - - - - delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
84. NDUFV1 ENSGALG00000042809 6222 0.878 - - - - 0.878 - - - - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:NCBI gene;Acc:430210]
85. FNDC5 ENSGALG00000003567 3328 0.878 - - - - 0.878 - - - - - Gallus gallus fibronectin type III domain containing 5 (FNDC5), mRNA. [Source:RefSeq mRNA;Acc:NM_001318986]
86. LMAN2 ENSGALG00000033232 11740 0.877 - - - - 0.877 - - - - - lectin, mannose binding 2 [Source:HGNC Symbol;Acc:HGNC:16986]
87. STARD3NL ENSGALG00000033038 4851 0.877 - - - - 0.877 - - - - - STARD3 N-terminal like [Source:HGNC Symbol;Acc:HGNC:19169]
88. SFXN5 ENSGALG00000016094 2678 0.877 - - - - 0.877 - - - - - sideroflexin 5 [Source:HGNC Symbol;Acc:HGNC:16073]
89. TMF1 ENSGALG00000013408 3344 0.877 - - - - 0.877 - - - - - TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]
90. ETS1 ENSGALG00000001143 7284 0.877 - - - - 0.877 - - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:NCBI gene;Acc:396235]
91. SNX14 ENSGALG00000015831 2554 0.877 - - - - 0.877 - - - - - sorting nexin 14 [Source:NCBI gene;Acc:421832]
92. GABARAPL2 ENSGALG00000003208 9195 0.877 - - - - 0.877 - - - - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
93. TIMMDC1 ENSGALG00000024480 9337 0.877 - - - - 0.877 - - - - - translocase of inner mitochondrial membrane domain containing 1 [Source:NCBI gene;Acc:418453]
94. CCDC132 CCDC132 2632 0.876 - - - - 0.876 - - - - -
95. SRGAP1 ENSGALG00000009825 6753 0.876 - - - - 0.876 - - - - - SLIT-ROBO Rho GTPase activating protein 1 [Source:NCBI gene;Acc:417821]
96. BRF1 ENSGALG00000011705 3406 0.876 - - - - 0.876 - - - - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
97. RBM34 ENSGALG00000029915 5618 0.876 - - - - 0.876 - - - - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
98. WNK2 ENSGALG00000038850 4712 0.876 - - - - 0.876 - - - - - WNK lysine deficient protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:14542]
99. MARC1 ENSGALG00000009453 5675 0.876 - - - - 0.876 - - - - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
100. RBM6 ENSGALG00000035578 1690 0.875 - - - - 0.875 - - - - - RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]

There are 306 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA