Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for POLR2D

Gene Name Gene ID Reads Annotation
POLR2D ENSGALG00000002057 14548 RNA polymerase II subunit D [Source:NCBI gene;Acc:424754]











Genes with expression patterns similar to POLR2D

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. POLR2D ENSGALG00000002057 14548 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA polymerase II subunit D [Source:NCBI gene;Acc:424754]
2. FZD6 ENSGALG00000030626 3336 1.654 - - - - - - - 0.828 - 0.826 frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
3. MIPEP ENSGALG00000017118 8666 1.628 - - - - - - - 0.776 - 0.852 mitochondrial intermediate peptidase [Source:HGNC Symbol;Acc:HGNC:7104]
4. HEXA ENSGALG00000043828 4789 1.627 - - - - - - - 0.833 - 0.794 hexosaminidase subunit alpha [Source:NCBI gene;Acc:415320]
5. PDIA3 ENSGALG00000008348 4982 1.609 - - - - - - - 0.833 - 0.776 protein disulfide isomerase family A member 3 [Source:NCBI gene;Acc:373899]
6. MOB3A ENSGALG00000031729 9690 0.998 - - - - - - 0.998 - - - MOB kinase activator 3A [Source:HGNC Symbol;Acc:HGNC:29802]
7. ENSGALG00000004773 ENSGALG00000004773 10418 0.998 - - - - - - 0.998 - - -
8. POLR1C ENSGALG00000010349 7059 0.997 - - - - - - 0.997 - - - RNA polymerase I and III subunit C [Source:NCBI gene;Acc:421452]
9. IMP4 ENSGALG00000029152 11669 0.997 - - - - - - 0.997 - - - IMP4, U3 small nucleolar ribonucleoprotein [Source:NCBI gene;Acc:100857200]
10. M6PR ENSGALG00000031681 9442 0.997 - - - - - - 0.997 - - - mannose-6-phosphate receptor, cation dependent, transcript variant X3
11. EIF3J ENSGALG00000008187 43570 0.997 - - - - - - 0.997 - - - eukaryotic translation initiation factor 3 subunit J [Source:NCBI gene;Acc:415573]
12. PFDN4 ENSGALG00000007792 26514 0.997 - - - - - - 0.997 - - - prefoldin subunit 4 [Source:NCBI gene;Acc:419337]
13. MRPL32 ENSGALG00000037258 6861 0.996 - - - - - - 0.996 - - - mitochondrial ribosomal protein L32 [Source:HGNC Symbol;Acc:HGNC:14035]
14. ATP5MC1 ENSGALG00000001330 37766 0.996 - - - - - - 0.996 - - - ATP synthase membrane subunit c locus 1 [Source:HGNC Symbol;Acc:HGNC:841]
15. HOXD8 ENSGALG00000037272 4338 0.996 - - - - - - 0.996 - - - homeobox D8 [Source:NCBI gene;Acc:396301]
16. CTU2 4818 0.995 - - - - - - 0.995 - - - cytosolic thiouridylase subunit 2, transcript variant X3
17. BMP3 ENSGALG00000035052 3260 0.994 - - - - - - 0.994 - - - bone morphogenetic protein 3 [Source:NCBI gene;Acc:422581]
18. EGFLAM ENSGALG00000003726 4588 0.994 - - - - - - 0.994 - - - EGF like, fibronectin type III and laminin G domains, transcript variant X1
19. ABCC10 2213 0.994 - - - - - - 0.994 - - - ATP binding cassette subfamily C member 10, transcript variant X10
20. TMEM97 ENSGALG00000005702 2037 0.994 - - - - - - 0.994 - - - transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
21. ENSGALG00000014190 ENSGALG00000014190 5735 0.994 - - - - - - 0.994 - - -
22. TMEM120B ENSGALG00000004254 2819 0.994 - - - - - - 0.994 - - - transmembrane protein 120B [Source:NCBI gene;Acc:416847]
23. CAND1 4541 0.994 - - - - - - 0.994 - - - cullin associated and neddylation dissociated 1
24. PTBP2 ENSGALG00000005552 3443 0.994 - - - - - - 0.994 - - - polypyrimidine tract binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17662]
25. TMC1 ENSGALG00000015145 1180 0.993 - - - - - - 0.993 - - - transmembrane channel like 1 [Source:NCBI gene;Acc:427255]
26. TMEM62 ENSGALG00000009260 1170 0.993 - - - - - - 0.993 - - - transmembrane protein 62 [Source:HGNC Symbol;Acc:HGNC:26269]
27. FBN3 ENSGALG00000037625 23313 0.992 - - - - - - 0.992 - - - fibrillin 3 [Source:HGNC Symbol;Acc:HGNC:18794]
28. PRDX6 ENSGALG00000003053 17928 0.991 - - - - - - 0.991 - - - peroxiredoxin 6 [Source:NCBI gene;Acc:429062]
29. FAM103A1 17380 0.991 - - - - - - 0.991 - - - family with sequence similarity 103 member A1, transcript variant X2
30. PHGDH ENSGALG00000002988 6912 0.99 - - - - - - 0.990 - - - phosphoglycerate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:8923]
31. DYNLL2 ENSGALG00000005522 17107 0.989 - - - - - - 0.989 - - - dynein light chain LC8-type 2 [Source:NCBI gene;Acc:417663]
32. DDX21 ENSGALG00000004144 13105 0.989 - - - - - - 0.989 - - - DExD-box helicase 21 [Source:HGNC Symbol;Acc:HGNC:2744]
33. DENR ENSGALG00000003795 30805 0.989 - - - - - - 0.989 - - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
34. MCM2 ENSGALG00000006037 13458 0.989 - - - - - - 0.989 - - - minichromosome maintenance complex component 2 [Source:NCBI gene;Acc:416027]
35. SMC2 ENSGALG00000015691 34013 0.988 - - - - - - 0.988 - - - structural maintenance of chromosomes 2 [Source:NCBI gene;Acc:396156]
36. ITGA1 ENSGALG00000014891 11378 0.986 - - - - - - 0.986 - - - integrin subunit alpha 1 [Source:NCBI gene;Acc:395951]
37. CHNTHL1 CHNTHL1 4976 0.983 - - - - - - 0.983 - - -
38. CALM_1 CALM_1 57812 0.952 - - - - - - 0.952 - - -
39. ALDH1A2 ENSGALG00000004270 49483 0.946 - - - - - - 0.946 - - - aldehyde dehydrogenase 1 family member A2 [Source:NCBI gene;Acc:395844]
40. TIA1 ENSGALG00000013879 16330 0.929 - - - - - - - 0.929 - - TIA1 cytotoxic granule associated RNA binding protein [Source:NCBI gene;Acc:771327]
41. UQCRFS1 ENSGALG00000025819 66637 0.918 - - - - - - 0.918 - - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:NCBI gene;Acc:415752]
42. ATP2A2 ENSGALG00000032287 12734 0.915 - - - - - - 0.915 - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 [Source:NCBI gene;Acc:396446]
43. EXOSC7 ENSGALG00000030084 8654 0.902 - - - - - - - 0.902 - - exosome component 7 [Source:NCBI gene;Acc:420704]
44. MRPL44 ENSGALG00000003067 15256 0.899 - - - - - - - 0.899 - - mitochondrial ribosomal protein L44 [Source:NCBI gene;Acc:424795]
45. NCAPG2 ENSGALG00000006525 2319 0.896 - - - - - - - - - 0.896 non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
46. PPA2 ENSGALG00000010582 22301 0.885 - - - - - - - - - 0.885 pyrophosphatase (inorganic) 2 [Source:HGNC Symbol;Acc:HGNC:28883]
47. ACAP2 ENSGALG00000007040 4182 0.884 - - - - - - - - - 0.884 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:NCBI gene;Acc:424895]
48. TMLHE ENSGALG00000007443 3619 0.883 - - - - - - - - - 0.883 trimethyllysine hydroxylase, epsilon [Source:NCBI gene;Acc:422296]
49. PCNP ENSGALG00000015330 15750 0.883 - - - - - - - - - 0.883 PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
50. AGGF1 ENSGALG00000004311 3011 0.882 - - - - - - - - - 0.882 angiogenic factor with G-patch and FHA domains 1, transcript variant X1
51. DYNC1H1 ENSGALG00000011330 16400 0.882 - - - - - - - 0.882 - - dynein cytoplasmic 1 heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:2961]
52. PWP1 ENSGALG00000012631 10536 0.879 - - - - - - - - - 0.879 PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
53. GTF3C1 ENSGALG00000007387 5788 0.876 - - - - - - - - - 0.876 general transcription factor IIIC subunit 1 [Source:HGNC Symbol;Acc:HGNC:4664]
54. MIER1 ENSGALG00000011118 1418 0.876 - - - - - - - - - 0.876 MIER1 transcriptional regulator [Source:NCBI gene;Acc:424702]
55. AGPS ENSGALG00000009236 2250 0.875 - - - - - - - - - 0.875 alkylglycerone phosphate synthase [Source:HGNC Symbol;Acc:HGNC:327]
56. PRR14L ENSGALG00000028473 439 0.874 - - - - - - - - - 0.874 proline rich 14-like, transcript variant X5
57. MYOCD ENSGALG00000001021 351 0.874 - - - - - - - - - 0.874 myocardin [Source:NCBI gene;Acc:427790]
58. DAP3 ENSGALG00000019796 13278 0.873 - - - - - - - - - 0.873 death associated protein 3 [Source:HGNC Symbol;Acc:HGNC:2673]
59. RWDD2B ENSGALG00000015807 3601 0.872 - - - - - - - - - 0.872 RWD domain containing 2B [Source:HGNC Symbol;Acc:HGNC:1302]
60. RAD50 ENSGALG00000006794 4308 0.872 - - - - - - - - - 0.872 RAD50 double strand break repair protein, transcript variant X4
61. SLC39A13 ENSGALG00000008122 2003 0.871 - - - - - - - - - 0.871 solute carrier family 39 member 13 [Source:NCBI gene;Acc:423183]
62. ASB3 ENSGALG00000008176 5422 0.87 - - - - - - - - - 0.870 ankyrin repeat and SOCS box containing 3 [Source:NCBI gene;Acc:428545]
63. MTSS1 ENSGALG00000041969 1312 0.869 - - - - - - - - - 0.869 MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
64. HDHD1 HDHD1 2928 0.869 - - - - - - - - - 0.869
65. DIAPH3 ENSGALG00000016937 1069 0.867 - - - - - - - - - 0.867 diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
66. TBC1D19 ENSGALG00000029673 1868 0.867 - - - - - - - - - 0.867 TBC1 domain family member 19 [Source:HGNC Symbol;Acc:HGNC:25624]
67. SPC25 ENSGALG00000010900 14238 0.867 - - - - - - - - - 0.867 SPC25, NDC80 kinetochore complex component [Source:NCBI gene;Acc:424172]
68. LAMP2 ENSGALG00000008572 198 0.865 - - - - - - - - - 0.865 lysosomal associated membrane protein 2 [Source:NCBI gene;Acc:414800]
69. MB21D1 2460 0.865 - - - - - - - - - 0.865 Mab-21 domain containing 1
70. ARHGAP21 ENSGALG00000007721 3961 0.864 - - - - - - - - - 0.864 Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
71. ETFDH ENSGALG00000009442 7671 0.864 - - - - - - - - - 0.864 electron transfer flavoprotein dehydrogenase [Source:NCBI gene;Acc:428724]
72. CCDC88A ENSGALG00000043587 2208 0.863 - - - - - - - - - 0.863 coiled-coil domain containing 88A [Source:HGNC Symbol;Acc:HGNC:25523]
73. CCDC51 ENSGALG00000006465 1845 0.863 - - - - - - - - - 0.863 coiled-coil domain containing 51, transcript variant X1
74. ERCC6 ENSGALG00000006254 3452 0.863 - - - - - - - - - 0.863 ERCC excision repair 6, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:3438]
75. SNRNP48 ENSGALG00000013005 1468 0.863 - - - - - - - - - 0.863 small nuclear ribonucleoprotein U11/U12 subunit 48 [Source:HGNC Symbol;Acc:HGNC:21368]
76. KCNMA1 ENSGALG00000004980 261 0.863 - - - - - - - - - 0.863 potassium calcium-activated channel subfamily M alpha 1 [Source:NCBI gene;Acc:374065]
77. FAM129A ENSGALG00000004812 269 0.862 - - - - - - - - - 0.862 family with sequence similarity 129 member A [Source:NCBI gene;Acc:424451]
78. SSH1 ENSGALG00000004928 222 0.862 - - - - - - - - - 0.862 slingshot protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:30579]
79. MRPL50 ENSGALG00000015543 11649 0.862 - - - - - - - - - 0.862 mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
80. BDP1 BDP1 3073 0.861 - - - - - - - - - 0.861
81. CNTRL ENSGALG00000001513 1773 0.861 - - - - - - - - - 0.861 centriolin [Source:NCBI gene;Acc:417121]
82. FBXO21 ENSGALG00000008201 2608 0.861 - - - - - - - - - 0.861 F-box protein 21 [Source:HGNC Symbol;Acc:HGNC:13592]
83. ITSN2 ENSGALG00000016504 651 0.861 - - - - - - - - - 0.861 intersectin 2 [Source:HGNC Symbol;Acc:HGNC:6184]
84. COG5 ENSGALG00000042764 4205 0.861 - - - - - - - - - 0.861 component of oligomeric golgi complex 5 [Source:NCBI gene;Acc:417704]
85. PPFIA1 ENSGALG00000035774 5258 0.86 - - - - - - - - - 0.860 PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
86. AURKA ENSGALG00000007768 793 0.86 - - - - - - - - - 0.860 aurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]
87. BRD1 ENSGALG00000029379 6047 0.859 - - - - - - - - - 0.859 bromodomain containing 1 [Source:NCBI gene;Acc:417731]
88. MPP5 ENSGALG00000009581 724 0.859 - - - - - - - - - 0.859 membrane palmitoylated protein 5 [Source:NCBI gene;Acc:423281]
89. PGD ENSGALG00000002797 15115 0.859 - - - - - - - - - 0.859 phosphogluconate dehydrogenase [Source:NCBI gene;Acc:419450]
90. CPNE2 ENSGALG00000001316 236 0.858 - - - - - - - - - 0.858 copine 2 [Source:NCBI gene;Acc:415646]
91. SOX6 ENSGALG00000006074 102 0.858 - - - - - - - - - 0.858 Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]
92. MCPH1 ENSGALG00000016332 2097 0.858 - - - - - - - - - 0.858 microcephalin 1 [Source:NCBI gene;Acc:100125976]
93. MSI1 ENSGALG00000007227 2279 0.858 - - - - - - - - - 0.858 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
94. PIGT ENSGALG00000003909 3804 0.857 - - - - - - - - - 0.857 phosphatidylinositol glycan anchor biosynthesis class T [Source:HGNC Symbol;Acc:HGNC:14938]
95. ACADL ENSGALG00000002891 8058 0.857 - - - - - - - - - 0.857 acyl-CoA dehydrogenase long chain [Source:NCBI gene;Acc:424005]
96. FAM190B FAM190B 165 0.857 - - - - - - - - - 0.857
97. WHSC1 1712 0.857 - - - - - - - - - 0.857 Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
98. PTX3 ENSGALG00000028284 2984 0.857 - - - - - - - - - 0.857 pentraxin 3 [Source:NCBI gene;Acc:548626]
99. TMEM128 ENSGALG00000014992 6567 0.857 - - - - - - - - - 0.857 transmembrane protein 128 [Source:NCBI gene;Acc:422845]
100. ASAP2 ENSGALG00000016419 1393 0.857 - - - - - - - - - 0.857 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]

There are 450 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA