Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for POLR1B

Gene Name Gene ID Reads Annotation
POLR1B ENSGALG00000032273 3845 RNA polymerase I subunit B [Source:HGNC Symbol;Acc:HGNC:20454]











Genes with expression patterns similar to POLR1B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. POLR1B ENSGALG00000032273 3845 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RNA polymerase I subunit B [Source:HGNC Symbol;Acc:HGNC:20454]
2. TXNDC11 ENSGALG00000003154 2224 2.711 - - - - 0.962 - - 0.868 - 0.881 thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
3. CYB5R2 ENSGALG00000032372 7967 2.485 - - - - 0.954 - 0.754 0.777 - - cytochrome b5 reductase 2 [Source:NCBI gene;Acc:408182]
4. CCNK ENSGALG00000011138 6416 2.472 - - - - 0.925 - - 0.721 - 0.826 cyclin K [Source:NCBI gene;Acc:423446]
5. DAP3 ENSGALG00000019796 13278 1.917 - - - - 0.978 - - - - 0.939 death associated protein 3 [Source:HGNC Symbol;Acc:HGNC:2673]
6. FZD6 ENSGALG00000030626 3336 1.911 - - - - 0.979 - - - - 0.932 frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
7. SMC6 ENSGALG00000016467 3321 1.898 - - - - 0.978 - - - - 0.920 Gallus gallus structural maintenance of chromosomes 6 (SMC6), mRNA. [Source:RefSeq mRNA;Acc:NM_001321614]
8. LOC770492 ENSGALG00000027778 695 1.873 - - - - 0.981 - - - - 0.892 ras-related and estrogen-regulated growth inhibitor-like
9. MPRIP ENSGALG00000004798 6700 1.867 - - - - 0.952 - - - - 0.915 myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
10. CKAP2 ENSGALG00000017025 25020 1.861 - - - - 0.929 - - - - 0.932 cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
11. CRCP ENSGALG00000002587 8809 1.858 - - - - 0.976 - - - - 0.882 CGRP receptor component [Source:NCBI gene;Acc:396022]
12. ZFR ENSGALG00000003235 8466 1.846 - - - - 0.940 - - - - 0.906 zinc finger RNA binding protein, transcript variant X3
13. NDUFA4 ENSGALG00000025999 53323 1.818 - - - - 0.946 - - - - 0.872 NDUFA4, mitochondrial complex associated [Source:NCBI gene;Acc:772135]
14. AGGF1 ENSGALG00000004311 3011 1.815 - - - - - - - 0.877 - 0.938 angiogenic factor with G-patch and FHA domains 1, transcript variant X1
15. COG6 ENSGALG00000017035 2777 1.802 - - - - 0.967 - - - - 0.835 component of oligomeric golgi complex 6 [Source:HGNC Symbol;Acc:HGNC:18621]
16. C1H21ORF33 ENSGALG00000019171 8910 1.77 - - - - 0.970 - - - - 0.800 chromosome 1 open reading frame, human C21orf33 [Source:NCBI gene;Acc:418552]
17. PWP1 ENSGALG00000012631 10536 1.763 - - - - 0.951 - - - - 0.812 PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
18. STOML2 STOML2 15566 1.756 - - - - 0.899 - - 0.857 - -
19. PEX2 ENSGALG00000035752 4427 1.745 - - - - 0.963 - - - - 0.782 peroxisomal biogenesis factor 2 [Source:NCBI gene;Acc:420192]
20. CPT2 ENSGALG00000010681 3211 1.739 - - - - - - - 0.844 - 0.895 carnitine palmitoyltransferase 2 [Source:NCBI gene;Acc:424649]
21. ROMO1 ENSGALG00000027416 9560 1.736 - - - - 0.938 - - - - 0.798 reactive oxygen species modulator 1 [Source:NCBI gene;Acc:768833]
22. UBN1 ENSGALG00000031416 2848 1.736 - - - - - - - 0.870 - 0.866 ubinuclein 1 [Source:NCBI gene;Acc:416398]
23. ZNF318 ENSGALG00000034040 1758 1.733 - - - - 0.980 - - - - 0.753 zinc finger protein 318 [Source:HGNC Symbol;Acc:HGNC:13578]
24. TMX4 ENSGALG00000028587 3513 1.731 - - - - 0.968 - - - - 0.763 thioredoxin related transmembrane protein 4 [Source:NCBI gene;Acc:416729]
25. UTP3 ENSGALG00000011553 8814 1.722 - - - - 0.933 - - 0.789 - - UTP3, small subunit processome component homolog (S. cerevisiae)
26. TMEM70 ENSGALG00000033568 10720 1.707 - - - - 0.930 - 0.777 - - - transmembrane protein 70 [Source:NCBI gene;Acc:420188]
27. TMEM184C ENSGALG00000010019 7856 1.704 - - - - 0.965 - 0.739 - - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
28. UBE2E3 ENSGALG00000020793 9517 1.699 - - - - 0.913 - - - - 0.786 ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
29. MYOCD ENSGALG00000001021 351 1.698 - - - - - - - 0.764 - 0.934 myocardin [Source:NCBI gene;Acc:427790]
30. RUVBL1 ENSGALG00000005931 9379 1.695 - - - - 0.915 - 0.780 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
31. IGF2BP2 ENSGALG00000033195 11421 1.681 - - - - 0.947 - 0.734 - - - insulin like growth factor 2 mRNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:28867]
32. PRPS1 ENSGALG00000004908 27994 1.681 - - - - 0.899 - - - - 0.782 phosphoribosyl pyrophosphate synthetase 1
33. STX2 ENSGALG00000002536 10438 1.668 - - - - 0.761 - - - - 0.907 syntaxin 2 [Source:NCBI gene;Acc:378895]
34. NCBP1 ENSGALG00000002087 8907 1.657 - - - - 0.885 - - - - 0.772 nuclear cap binding protein subunit 1 [Source:NCBI gene;Acc:427379]
35. SERINC1 ENSGALG00000014868 12484 1.644 - - - - 0.875 - - - - 0.769 serine incorporator 1 [Source:NCBI gene;Acc:421722]
36. PPFIA1 ENSGALG00000035774 5258 1.642 - - - - - - 0.720 - - 0.922 PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
37. YIPF3 ENSGALG00000041037 6126 1.636 - - - - - - 0.762 - - 0.874 Yip1 domain family member 3 [Source:NCBI gene;Acc:421453]
38. ILF2 ENSGALG00000011570 23050 1.636 - - - - 0.868 - 0.768 - - - interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]
39. TANK ENSGALG00000011131 3382 1.631 - - - - - - - 0.734 - 0.897 TRAF family member associated NFKB activator [Source:NCBI gene;Acc:424190]
40. NUPL1 NUPL1 8197 1.626 - - - - 0.915 - 0.711 - - -
41. SMC4 ENSGALG00000009553 15715 1.624 - - - - - - 0.737 - - 0.887 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
42. TMEM165 ENSGALG00000027886 5468 1.619 - - - - - - 0.704 - - 0.915 transmembrane protein 165 [Source:HGNC Symbol;Acc:HGNC:30760]
43. RRAGC ENSGALG00000033079 4966 1.616 - - - - - - 0.700 - - 0.916 Ras related GTP binding C [Source:NCBI gene;Acc:419605]
44. METAP2 ENSGALG00000011377 16311 1.615 - - - - 0.857 - 0.758 - - - methionyl aminopeptidase 2 [Source:NCBI gene;Acc:417912]
45. AN1ZNF5L ENSGALG00000014589 21148 1.612 - - - - 0.874 - 0.738 - - - AN1-type zinc finger protein 5-like, transcript variant X2
46. PDE3B ENSGALG00000006035 3732 1.607 - - - - - - - 0.837 - 0.770 phosphodiesterase 3B [Source:NCBI gene;Acc:423064]
47. COX5A ENSGALG00000014121 55281 1.604 - - - - - - 0.759 - - 0.845 cytochrome c oxidase subunit 5A [Source:HGNC Symbol;Acc:HGNC:2267]
48. CAMSAP1 ENSGALG00000001692 2617 1.602 - - - - - - - 0.824 - 0.778 calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
49. MED24 ENSGALG00000013506 5403 1.592 - - - - - - 0.709 - - 0.883 mediator complex subunit 24 [Source:NCBI gene;Acc:426134]
50. GORASP1 ENSGALG00000006033 4033 1.592 - - - - - - 0.704 - - 0.888 golgi reassembly stacking protein 1 [Source:NCBI gene;Acc:420426]
51. ENSGALG00000009771 ENSGALG00000009771 10273 1.591 - - - - 0.832 - 0.759 - - -
52. PPA2 ENSGALG00000010582 22301 1.588 - - - - 0.721 - - - - 0.867 pyrophosphatase (inorganic) 2 [Source:HGNC Symbol;Acc:HGNC:28883]
53. LOC426385 ENSGALG00000026301 2703 1.584 - - - - - - 0.766 - - 0.818 serine/threonine kinase 35-like, transcript variant X2
54. BRT-1 BRT-1 26083 1.577 - - - - - - - 0.726 - 0.851
55. UCHL3 ENSGALG00000016921 16208 1.574 - - - - - - 0.705 - - 0.869 ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
56. RAB10 ENSGALG00000016535 5272 1.571 - - - - - - 0.754 - - 0.817 RAB10, member RAS oncogene family [Source:NCBI gene;Acc:421994]
57. GPALPP1 ENSGALG00000031567 4221 1.569 - - - - - - 0.718 0.851 - - GPALPP motifs containing 1 [Source:NCBI gene;Acc:418842]
58. WRB ENSGALG00000016070 5199 1.562 - - - - - - 0.750 0.812 - - tryptophan rich basic protein [Source:NCBI gene;Acc:770415]
59. HSD17B7 ENSGALG00000037852 4750 1.561 - - - - - - 0.701 0.860 - - hydroxysteroid 17-beta dehydrogenase 7 [Source:NCBI gene;Acc:424367]
60. DHODH ENSGALG00000000802 3226 1.556 - - - - - - 0.723 0.833 - - dihydroorotate dehydrogenase (quinone) [Source:NCBI gene;Acc:415876]
61. SRF ENSGALG00000032029 6983 1.55 - - - - - - - 0.725 - 0.825 serum response factor [Source:NCBI gene;Acc:396103]
62. CCNB2 ENSGALG00000004161 50324 1.549 - - - - 0.844 - - - - 0.705 cyclin B2 [Source:NCBI gene;Acc:415400]
63. DGCR2 ENSGALG00000005891 8405 1.541 - - - - - - 0.714 - - 0.827 DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
64. HSPA4 ENSGALG00000040882 20966 1.539 - - - - - - 0.716 - - 0.823 heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
65. PSPC1 ENSGALG00000017142 13036 1.531 - - - - - - 0.799 - - 0.732 paraspeckle component 1 [Source:NCBI gene;Acc:418955]
66. UBL3 ENSGALG00000017084 7417 1.528 - - - - - - 0.727 - - 0.801 ubiquitin like 3 [Source:NCBI gene;Acc:418921]
67. PDDC1 5179 1.527 - - - - - - 0.775 0.752 - - Parkinson disease 7 domain containing 1, transcript variant X6
68. BET1L ENSGALG00000004172 5305 1.526 - - - - - - 0.783 0.743 - - Bet1 golgi vesicular membrane trafficking protein like [Source:NCBI gene;Acc:422985]
69. NOC4L ENSGALG00000002272 9644 1.523 - - - - - - 0.762 - - 0.761 nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
70. GTPBP4 ENSGALG00000006703 16183 1.52 - - - - - - - 0.795 - 0.725 GTP binding protein 4 [Source:NCBI gene;Acc:420458]
71. IGBP1 ENSGALG00000044628 9200 1.501 - - - - - - 0.795 0.706 - - immunoglobulin (CD79A) binding protein 1, transcript variant X3
72. SNRNP40 ENSGALG00000000615 32298 1.492 - - - - - - 0.720 - - 0.772 small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
73. CHRAC1 ENSGALG00000040823 5695 1.485 - - - - - - 0.714 - - 0.771 chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
74. MTMR8 ENSGALG00000007590 6022 1.483 - - - - - - - 0.735 - 0.748 myotubularin related protein 8 [Source:NCBI gene;Acc:422312]
75. FKBP12 FKBP12 64317 1.479 - - - - 0.710 - 0.769 - - -
76. TBC1D7 ENSGALG00000012731 4891 1.449 - - - - - - 0.710 0.739 - - TBC1 domain family member 7 [Source:HGNC Symbol;Acc:HGNC:21066]
77. RPF2 ENSGALG00000037087 12788 1.446 - - - - - - 0.742 - - 0.704 ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
78. FYTTD1 ENSGALG00000007581 9341 1.432 - - - - - - 0.712 - - 0.720 forty-two-three domain containing 1 [Source:NCBI gene;Acc:424921]
79. PCM1 ENSGALG00000013602 6347 1.424 - - - - - - 0.715 - - 0.709 pericentriolar material 1 [Source:NCBI gene;Acc:395204]
80. ATPAF1 ENSGALG00000010444 3677 0.988 - - - - 0.988 - - - - - ATP synthase mitochondrial F1 complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18803]
81. SLC9A3R2 ENSGALG00000005608 4220 0.987 - - - - 0.987 - - - - - SLC9A3 regulator 2 [Source:HGNC Symbol;Acc:HGNC:11076]
82. ARPP21 ENSGALG00000043240 2403 0.986 - - - - 0.986 - - - - - cAMP regulated phosphoprotein 21 [Source:HGNC Symbol;Acc:HGNC:16968]
83. ROR2 ENSGALG00000015208 1323 0.984 - - - - 0.984 - - - - - receptor tyrosine kinase like orphan receptor 2 [Source:NCBI gene;Acc:769516]
84. ERICH1 ENSGALG00000031021 1495 0.981 - - - - 0.981 - - - - - glutamate rich 1 [Source:NCBI gene;Acc:421904]
85. RAB23 ENSGALG00000016279 597 0.981 - - - - 0.981 - - - - - ras-related protein Rab-23 [Source:NCBI gene;Acc:421879]
86. DRD2 ENSGALG00000007794 399 0.981 - - - - 0.981 - - - - - dopamine receptor D2 [Source:NCBI gene;Acc:428252]
87. Sep-11 Sep-11 2005 0.98 - - - - 0.980 - - - - -
88. FANCM ENSGALG00000031182 1030 0.98 - - - - 0.980 - - - - - FA complementation group M [Source:HGNC Symbol;Acc:HGNC:23168]
89. ADPGK ENSGALG00000001788 208 0.979 - - - - 0.979 - - - - - ADP dependent glucokinase [Source:NCBI gene;Acc:415317]
90. TEL TEL 1231 0.979 - - - - 0.979 - - - - -
91. AP1S3 ENSGALG00000005171 2981 0.979 - - - - 0.979 - - - - - adaptor related protein complex 1 subunit sigma 3 [Source:NCBI gene;Acc:424807]
92. IL4RA IL4RA 1237 0.978 - - - - 0.978 - - - - -
93. TCERG1L ENSGALG00000010470 490 0.978 - - - - 0.978 - - - - - transcription elongation regulator 1 like [Source:HGNC Symbol;Acc:HGNC:23533]
94. OGFOD3 ENSGALG00000001618 2438 0.978 - - - - 0.978 - - - - - 2-oxoglutarate and iron dependent oxygenase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:26174]
95. ZBTB8OS ENSGALG00000003517 2436 0.978 - - - - 0.978 - - - - - zinc finger and BTB domain containing 8 opposite strand [Source:HGNC Symbol;Acc:HGNC:24094]
96. DNAJA1 ENSGALG00000023066 3820 0.978 - - - - 0.978 - - - - - DnaJ heat shock protein family (Hsp40) member A1 [Source:NCBI gene;Acc:427376]
97. THOC1 ENSGALG00000014915 5846 0.978 - - - - 0.978 - - - - - Gallus gallus THO complex 1 (THOC1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001321610]
98. PRKCD ENSGALG00000002016 1476 0.977 - - - - 0.977 - - - - - protein kinase C delta [Source:NCBI gene;Acc:415905]
99. ALDH18A1 ENSGALG00000034655 3038 0.977 - - - - 0.977 - - - - - aldehyde dehydrogenase 18 family member A1, transcript variant X13
100. CALCA CALCA 682 0.977 - - - - 0.977 - - - - -

There are 918 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA