Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for POLR1A

Gene Name Gene ID Reads Annotation
POLR1A ENSGALG00000038160 236 RNA polymerase I subunit A [Source:HGNC Symbol;Acc:HGNC:17264]











Genes with expression patterns similar to POLR1A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. POLR1A ENSGALG00000038160 236 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 RNA polymerase I subunit A [Source:HGNC Symbol;Acc:HGNC:17264]
2. PLXNC1 ENSGALG00000011309 69 1.881 - - - - - - 0.928 0.953 - - plexin C1 [Source:HGNC Symbol;Acc:HGNC:9106]
3. ARSD ENSGALG00000016648 33 1.728 - - - - - - 0.784 0.944 - - arylsulfatase D, transcript variant X1
4. LOC427545 ENSGALG00000004428 3 1 - - - - - - 1.000 - - - histamine H3 receptor-like
5. FGD4 ENSGALG00000012932 50 1 - - - - - - 1.000 - - - FYVE, RhoGEF and PH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:19125]
6. ZBTB11 ENSGALG00000015334 22 1 - - - - - - 1.000 - - - zinc finger and BTB domain containing 11 [Source:HGNC Symbol;Acc:HGNC:16740]
7. VRK2 ENSGALG00000032770 117 1 - - - - - - 1.000 - - - vaccinia related kinase 2 [Source:HGNC Symbol;Acc:HGNC:12719]
8. ST8SIA6 ENSGALG00000008671 8 1 - - - - - - 1.000 - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [Source:NCBI gene;Acc:414335]
9. LHX8 ENSGALG00000011369 77 1 - - - - - - 1.000 - - - LIM homeobox 8 [Source:NCBI gene;Acc:424721]
10. TRIM25 ENSGALG00000003144 12 1 - - - - - - 1.000 - - - Gallus gallus tripartite motif containing 25 (TRIM25), mRNA. [Source:RefSeq mRNA;Acc:NM_001318458]
11. ENSGALG00000027367 ENSGALG00000027367 7 1 - - - - - - 1.000 - - -
12. ADAM23 ENSGALG00000008582 28 1 - - - - - - 1.000 - - - ADAM metallopeptidase domain 23 [Source:NCBI gene;Acc:424099]
13. FGA ENSGALG00000009266 291 1 - - - - - - 1.000 - - - fibrinogen alpha chain [Source:NCBI gene;Acc:396307]
14. PLA2G1BL ENSGALG00000007236 4 1 - - - - - - 1.000 - - - phospholipase A2, major isoenzyme-like
15. GLRA2 ENSGALG00000016571 10 1 - - - - - - 1.000 - - - glycine receptor alpha 2 [Source:HGNC Symbol;Acc:HGNC:4327]
16. DIRAS2 ENSGALG00000005323 11 1 - - - - - - 1.000 - - - DIRAS family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:19323]
17. KCNV1 ENSGALG00000031449 64 1 - - - - - - 1.000 - - - potassium voltage-gated channel modifier subfamily V member 1
18. RD RD 99 1 - - - - - - 1.000 - - -
19. ENSGALG00000010218 ENSGALG00000010218 12 1 - - - - - - 1.000 - - -
20. EGR4 ENSGALG00000016086 4 1 - - - - - - 1.000 - - - early growth response 4 [Source:HGNC Symbol;Acc:HGNC:3241]
21. SPERT ENSGALG00000016981 145 1 - - - - - - 1.000 - - - spermatid associated [Source:NCBI gene;Acc:418848]
22. MMP13 ENSGALG00000017183 7 1 - - - - - - 1.000 - - - matrix metallopeptidase 13 [Source:NCBI gene;Acc:395683]
23. P2RY13 ENSGALG00000039432 16 1 - - - - - - 1.000 - - - purinergic receptor P2Y13 [Source:HGNC Symbol;Acc:HGNC:4537]
24. LZTS2 ENSGALG00000023612 9 1 - - - - - - 1.000 - - - leucine zipper tumor suppressor 2 [Source:HGNC Symbol;Acc:HGNC:29381]
25. SNORD79 SNORD79 12 1 - - - - - - 1.000 - - -
26. FGF13 ENSGALG00000006508 8 1 - - - - - - 1.000 - - - fibroblast growth factor 13 [Source:NCBI gene;Acc:414831]
27. CBLN4 ENSGALG00000030821 9 1 - - - - - - 1.000 - - - cerebellin 4 precursor [Source:NCBI gene;Acc:769254]
28. HPS3 ENSGALG00000040089 44 1 - - - - - - 1.000 - - - HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 [Source:HGNC Symbol;Acc:HGNC:15597]
29. FOXP1 127 1 - - - - - - 1.000 - - - forkhead box P1, transcript variant X14
30. COL4A3BP ENSGALG00000014952 96 1 - - - - - - 1.000 - - - collagen type IV alpha 3 binding protein [Source:HGNC Symbol;Acc:HGNC:2205]
31. MAT2A ENSGALG00000015366 17 0.977 - - - - - - - 0.977 - - methionine adenosyltransferase 2A, transcript variant X1
32. PTDSS2 ENSGALG00000004300 682 0.969 - - - - - - - 0.969 - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
33. P4HB ENSGALG00000038290 286 0.961 - - - - - - - 0.961 - - prolyl 4-hydroxylase subunit beta [Source:NCBI gene;Acc:374091]
34. TMEM45B ENSGALG00000001203 48 0.959 - - - - - - - 0.959 - - transmembrane protein 45B [Source:HGNC Symbol;Acc:HGNC:25194]
35. WNT16 ENSGALG00000028069 157 0.958 - - - - - - - 0.958 - - Wnt family member 16 [Source:HGNC Symbol;Acc:HGNC:16267]
36. ENSGALG00000026913 ENSGALG00000026913 12 0.957 - - - - - - - 0.957 - -
37. METTL24 ENSGALG00000041120 60 0.957 - - - - - - - 0.957 - - methyltransferase like 24 [Source:HGNC Symbol;Acc:HGNC:21566]
38. AVP ENSGALG00000014117 19 0.957 - - - - - - - 0.957 - - arginine vasopressin [Source:NCBI gene;Acc:396101]
39. OGN ENSGALG00000026736 223 0.957 - - - - - - - 0.957 - - osteoglycin [Source:NCBI gene;Acc:374039]
40. DDB1 ENSGALG00000042333 275 0.956 - - - - - - - 0.956 - - damage specific DNA binding protein 1 [Source:NCBI gene;Acc:374050]
41. TGM4 ENSGALG00000033171 19 0.955 - - - - - - - 0.955 - - transglutaminase 4 [Source:NCBI gene;Acc:420706]
42. PAPSS2 ENSGALG00000003689 278 0.955 - - - - - - - 0.955 - - 3'-phosphoadenosine 5'-phosphosulfate synthase 2 [Source:HGNC Symbol;Acc:HGNC:8604]
43. TMEM248 ENSGALG00000033954 248 0.953 - - - - - - - 0.953 - - transmembrane protein 248 [Source:HGNC Symbol;Acc:HGNC:25476]
44. ADAM17 ENSGALG00000016427 49 0.953 - - - - - - - 0.953 - - ADAM metallopeptidase domain 17 [Source:NCBI gene;Acc:421931]
45. MIF4GD ENSGALG00000026715 41 0.953 - - - - - - - 0.953 - - MIF4G domain containing [Source:HGNC Symbol;Acc:HGNC:24030]
46. ENSGALG00000021106 ENSGALG00000021106 35 0.95 - - - - - - - 0.950 - -
47. SOD3 ENSGALG00000018557 16 0.949 - - - - - - - 0.949 - - superoxide dismutase 3 [Source:HGNC Symbol;Acc:HGNC:11181]
48. FHL1 ENSGALG00000006190 22 0.949 - - - - - - - 0.949 - - four and a half LIM domains 1 [Source:HGNC Symbol;Acc:HGNC:3702]
49. ABCA4 ENSGALG00000005752 15 0.949 - - - - - - - 0.949 - - ATP binding cassette subfamily A member 4 [Source:HGNC Symbol;Acc:HGNC:34]
50. OSBP ENSGALG00000030548 439 0.946 - - - - - - - 0.946 - - oxysterol binding protein [Source:HGNC Symbol;Acc:HGNC:8503]
51. BAAT ENSGALG00000040619 579 0.945 - - - - - - - 0.945 - - bile acid-CoA:amino acid N-acyltransferase [Source:HGNC Symbol;Acc:HGNC:932]
52. ENSGALG00000027352 ENSGALG00000027352 69 0.945 - - - - - - - 0.945 - -
53. LOX ENSGALG00000028063 1488 0.945 - - - - - - - 0.945 - - lysyl oxidase [Source:NCBI gene;Acc:396474]
54. KSR1 ENSGALG00000005685 78 0.941 - - - - - - - 0.941 - - kinase suppressor of ras 1 [Source:HGNC Symbol;Acc:HGNC:6465]
55. CYP3A4 ENSGALG00000004436 75 0.938 - - - - - - - 0.938 - - Gallus gallus cytochrome P450 family 3 subfamily A member 4 (CYP3A4), mRNA. [Source:RefSeq mRNA;Acc:NM_001329508]
56. SELP 28 0.938 - - - - - - - 0.938 - - selectin P, transcript variant X9
57. C1QA ENSGALG00000021569 343 0.937 - - - - - - - 0.937 - - complement C1q A chain [Source:HGNC Symbol;Acc:HGNC:1241]
58. RAB19 ENSGALG00000012850 155 0.936 - - - - - - - 0.936 - - RAB19, member RAS oncogene family [Source:NCBI gene;Acc:418113]
59. IFT88 1241 0.935 - - - - - - - 0.935 - - intraflagellar transport 88, transcript variant X3
60. FBXL18 ENSGALG00000004611 97 0.934 - - - - - - - 0.934 - - F-box and leucine rich repeat protein 18 [Source:NCBI gene;Acc:416484]
61. CCDC102A ENSGALG00000029999 324 0.933 - - - - - - - 0.933 - - coiled-coil domain containing 102A [Source:HGNC Symbol;Acc:HGNC:28097]
62. UGT8L ENSGALG00000005599 93 0.927 - - - - - - - 0.927 - - UDP glycosyltransferase 8-like
63. ENSGALG00000016213 ENSGALG00000016213 33 0.927 - - - - - - - 0.927 - -
64. CHST3 ENSGALG00000024056 308 0.926 - - - - - - 0.926 - - - carbohydrate sulfotransferase 3 [Source:NCBI gene;Acc:396018]
65. KLHL32 68 0.925 - - - - - - - 0.925 - - kelch like family member 32, transcript variant X3
66. MXRA8 ENSGALG00000001561 181 0.923 - - - - - - - 0.923 - - matrix remodeling associated 8 [Source:NCBI gene;Acc:395347]
67. PC7 PC7 1105 0.923 - - - - - - - 0.923 - -
68. STK24 ENSGALG00000016885 442 0.923 - - - - - - - 0.923 - - serine/threonine kinase 24 [Source:NCBI gene;Acc:418780]
69. NR0B1 ENSGALG00000016287 481 0.922 - - - - - - - 0.922 - - nuclear receptor subfamily 0 group B member 1 [Source:NCBI gene;Acc:395285]
70. GLOD5 ENSGALG00000025991 17 0.922 - - - - - - - 0.922 - - glyoxalase domain containing 5 [Source:HGNC Symbol;Acc:HGNC:33358]
71. EREG ENSGALG00000010864 46 0.921 - - - - - - - 0.921 - - epiregulin [Source:NCBI gene;Acc:408036]
72. RBBP8NL ENSGALG00000045938 89 0.92 - - - - - - - 0.920 - - RBBP8 N-terminal like [Source:HGNC Symbol;Acc:HGNC:16144]
73. SERPINF2 ENSGALG00000002987 236 0.919 - - - - - - - 0.919 - - serpin family F member 2 [Source:HGNC Symbol;Acc:HGNC:9075]
74. SMARCD3 ENSGALG00000043137 401 0.917 - - - - - - - 0.917 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 [Source:HGNC Symbol;Acc:HGNC:11108]
75. GJB1 ENSGALG00000005541 261 0.913 - - - - - - - 0.913 - - gap junction protein beta 1 [Source:NCBI gene;Acc:378797]
76. DAG1 ENSGALG00000037784 1012 0.913 - - - - - - - 0.913 - - dystroglycan 1 [Source:NCBI gene;Acc:100049058]
77. C4orf47 ENSGALG00000013287 44 0.909 - - - - - - - 0.909 - - chromosome 4 open reading frame 47 [Source:HGNC Symbol;Acc:HGNC:34346]
78. TRUB1 ENSGALG00000009091 1005 0.905 - - - - - - - 0.905 - - TruB pseudouridine synthase family member 1 [Source:HGNC Symbol;Acc:HGNC:16060]
79. GRHPR ENSGALG00000005423 1567 0.905 - - - - - - - 0.905 - - glyoxylate and hydroxypyruvate reductase [Source:HGNC Symbol;Acc:HGNC:4570]
80. NTNG2 ENSGALG00000003677 73 0.904 - - - - - - - 0.904 - - netrin G2 [Source:HGNC Symbol;Acc:HGNC:14288]
81. PRKAA1 ENSGALG00000014832 547 0.903 - - - - - - - 0.903 - - protein kinase AMP-activated catalytic subunit alpha 1 [Source:NCBI gene;Acc:427185]
82. TBC1D2B ENSGALG00000003322 54 0.898 - - - - - - 0.898 - - - TBC1 domain family member 2B [Source:HGNC Symbol;Acc:HGNC:29183]
83. CHRNA6 ENSGALG00000015382 31 0.898 - - - - - - - 0.898 - - cholinergic receptor nicotinic alpha 6 subunit [Source:NCBI gene;Acc:396321]
84. KLF8 ENSGALG00000007570 1651 0.896 - - - - - - - 0.896 - - Kruppel-like factor 8, transcript variant X6
85. CHD6 477 0.894 - - - - - - - 0.894 - - chromodomain helicase DNA binding protein 6, transcript variant X10
86. DMXL1 ENSGALG00000002227 88 0.89 - - - - - - 0.890 - - - Dmx like 1 [Source:HGNC Symbol;Acc:HGNC:2937]
87. ENSGALG00000014825 ENSGALG00000014825 491 0.89 - - - - - - - 0.890 - -
88. ENSGALG00000001886 ENSGALG00000001886 1024 0.89 - - - - - - - 0.890 - -
89. OVCH2 ENSGALG00000005318 8 0.888 - - - - - - 0.888 - - - ovochymase 2 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:29970]
90. GPRC5B ENSGALG00000002028 28 0.888 - - - - - - 0.888 - - - G protein-coupled receptor class C group 5 member B [Source:HGNC Symbol;Acc:HGNC:13308]
91. ORC6 ENSGALG00000004342 454 0.887 - - - - - - - 0.887 - - origin recognition complex subunit 6 [Source:NCBI gene;Acc:415749]
92. LANCL1 ENSGALG00000002921 571 0.886 - - - - - - - 0.886 - - LanC like 1 [Source:NCBI gene;Acc:424006]
93. TNK2 ENSGALG00000027983 144 0.884 - - - - - - - 0.884 - - tyrosine kinase non receptor 2, transcript variant X7
94. C5 ENSGALG00000001565 142 0.88 - - - - - - - 0.880 - - complement C5 [Source:HGNC Symbol;Acc:HGNC:1331]
95. VDAC1 ENSGALG00000006503 864 0.879 - - - - - - - 0.879 - - voltage dependent anion channel 1 [Source:NCBI gene;Acc:416320]
96. STRIP1 ENSGALG00000037995 621 0.877 - - - - - - - 0.877 - - striatin interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:25916]
97. IGFBP4 ENSGALG00000040672 608 0.877 - - - - - - - 0.877 - - insulin like growth factor binding protein 4 [Source:NCBI gene;Acc:374271]
98. NUDT13 ENSGALG00000004319 341 0.875 - - - - - - - 0.875 - - nudix hydrolase 13 [Source:HGNC Symbol;Acc:HGNC:18827]
99. SULT6B1 ENSGALG00000046375 23 0.874 - - - - - - 0.874 - - - sulfotransferase family 6B member 1 [Source:HGNC Symbol;Acc:HGNC:33433]
100. LGR5 ENSGALG00000010163 2931 0.874 - - - - - - - 0.874 - - leucine rich repeat containing G protein-coupled receptor 5 [Source:HGNC Symbol;Acc:HGNC:4504]

There are 136 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA