Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for POLB

Gene Name Gene ID Reads Annotation
POLB ENSGALG00000040828 7462 DNA polymerase beta [Source:HGNC Symbol;Acc:HGNC:9174]











Genes with expression patterns similar to POLB

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. POLB ENSGALG00000040828 7462 9 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 DNA polymerase beta [Source:HGNC Symbol;Acc:HGNC:9174]
2. CCDC90B ENSGALG00000037072 5088 1.789 - - - - - 0.804 0.985 - - - coiled-coil domain containing 90B [Source:HGNC Symbol;Acc:HGNC:28108]
3. ZNF276 ENSGALG00000000513 2410 1.77 - - - - - 0.787 0.983 - - - zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
4. EXOSC7 ENSGALG00000030084 8654 1.761 - - - - - 0.806 0.955 - - - exosome component 7 [Source:NCBI gene;Acc:420704]
5. TPRG1L ENSGALG00000001024 9809 1.676 - - - - - 0.772 - 0.904 - - tumor protein p63 regulated 1 like [Source:HGNC Symbol;Acc:HGNC:27007]
6. APITD1 APITD1 11830 0.993 - - - - - - 0.993 - - -
7. TP53INP1 ENSGALG00000041353 6890 0.993 - - - - - - 0.993 - - - tumor protein p53 inducible nuclear protein 1 [Source:NCBI gene;Acc:420232]
8. CTNNBL1 ENSGALG00000006817 6765 0.991 - - - - - - 0.991 - - - catenin beta like 1 [Source:HGNC Symbol;Acc:HGNC:15879]
9. MRPS34 ENSGALG00000001792 14262 0.99 - - - - - - 0.990 - - - mitochondrial ribosomal protein S34 [Source:NCBI gene;Acc:426987]
10. MMADHC ENSGALG00000012473 9026 0.989 - - - - - - 0.989 - - - methylmalonic aciduria and homocystinuria, cblD type [Source:NCBI gene;Acc:424311]
11. GDPD4 ENSGALG00000000690 824 0.989 - - - - - - 0.989 - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
12. GSDMA ENSGALG00000013495 1650 0.988 - - - - - - 0.988 - - - gasdermin A [Source:NCBI gene;Acc:426132]
13. SPINT1 ENSGALG00000008469 5735 0.987 - - - - - - 0.987 - - - serine peptidase inhibitor, Kunitz type 1, transcript variant X2
14. RNF13 ENSGALG00000010411 8749 0.987 - - - - - - 0.987 - - - ring finger protein 13 [Source:NCBI gene;Acc:396303]
15. NOB1 ENSGALG00000000693 15442 0.986 - - - - - - 0.986 - - - NIN1 (RPN12) binding protein 1 homolog [Source:HGNC Symbol;Acc:HGNC:29540]
16. GALNTL4 GALNTL4 3548 0.984 - - - - - - 0.984 - - -
17. MYBL2 ENSGALG00000003503 15875 0.984 - - - - - - 0.984 - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
18. COMMD8 ENSGALG00000026279 13509 0.983 - - - - - - 0.983 - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
19. TTF1 4214 0.983 - - - - - - 0.983 - - - transcription termination factor 1
20. gga-mir-1723 ENSGALG00000025386 6662 0.983 - - - - - - 0.983 - - - gga-mir-1723 [Source:miRBase;Acc:MI0007460]
21. ENSGALG00000006730 ENSGALG00000006730 3695 0.983 - - - - - - 0.983 - - -
22. GCAT ENSGALG00000012312 7906 0.983 - - - - - - 0.983 - - - glycine C-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:4188]
23. LOC425795 ENSGALG00000027696 2357 0.982 - - - - - - 0.982 - - - ectoderm-neural cortex protein 1-like, transcript variant X1
24. PRKG1 ENSGALG00000003805 4654 0.982 - - - - - - 0.982 - - - protein kinase cGMP-dependent 1 [Source:HGNC Symbol;Acc:HGNC:9414]
25. USO1 ENSGALG00000010878 9506 0.982 - - - - - - 0.982 - - - USO1 vesicle transport factor [Source:NCBI gene;Acc:422575]
26. C6H10ORF32 C6H10ORF32 7694 0.982 - - - - - - 0.982 - - -
27. ATPAF2 ENSGALG00000004926 3393 0.982 - - - - - - 0.982 - - - ATP synthase mitochondrial F1 complex assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:18802]
28. GLT8D1 ENSGALG00000001642 4232 0.982 - - - - - - 0.982 - - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
29. DIS3 ENSGALG00000016930 3696 0.982 - - - - - - 0.982 - - - DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease [Source:HGNC Symbol;Acc:HGNC:20604]
30. SNAPIN ENSGALG00000026796 11155 0.982 - - - - - - 0.982 - - - SNAP associated protein [Source:HGNC Symbol;Acc:HGNC:17145]
31. LOC424109 ENSGALG00000008738 3932 0.982 - - - - - - 0.982 - - - alpha-aspartyl dipeptidase
32. CRAC1A CRAC1A 5265 0.981 - - - - - - 0.981 - - -
33. LYVE1 ENSGALG00000005643 1230 0.981 - - - - - - 0.981 - - - lymphatic vessel endothelial hyaluronan receptor 1 [Source:NCBI gene;Acc:423038]
34. DNAJC10 ENSGALG00000008862 3114 0.981 - - - - - - 0.981 - - - DnaJ heat shock protein family (Hsp40) member C10 [Source:HGNC Symbol;Acc:HGNC:24637]
35. RPUSD4 ENSGALG00000024326 3788 0.981 - - - - - - 0.981 - - - RNA pseudouridylate synthase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25898]
36. SAV1 ENSGALG00000012341 3313 0.981 - - - - - - 0.981 - - - salvador family WW domain containing protein 1 [Source:HGNC Symbol;Acc:HGNC:17795]
37. LHFPL2 ENSGALG00000004437 500 0.981 - - - - - - 0.981 - - - LHFPL tetraspan subfamily member 2 [Source:HGNC Symbol;Acc:HGNC:6588]
38. ACTR6 ENSGALG00000040976 31271 0.981 - - - - - - 0.981 - - - ARP6 actin-related protein 6 homolog [Source:NCBI gene;Acc:395348]
39. LUZP2 ENSGALG00000030151 585 0.981 - - - - - - 0.981 - - - leucine zipper protein 2 [Source:NCBI gene;Acc:423001]
40. MAPT ENSGALG00000000625 659 0.981 - - - - - - 0.981 - - - microtubule associated protein tau [Source:NCBI gene;Acc:426737]
41. CSDE1 ENSGALG00000002139 1683 0.981 - - - - - - 0.981 - - - cold shock domain containing E1 [Source:NCBI gene;Acc:419886]
42. CHL1 ENSGALG00000037856 1565 0.981 - - - - - - 0.981 - - - cell adhesion molecule L1 like [Source:HGNC Symbol;Acc:HGNC:1939]
43. PPP3CB ENSGALG00000005243 8794 0.98 - - - - - - 0.980 - - - Gallus gallus protein phosphatase 3 catalytic subunit beta (PPP3CB), mRNA. [Source:RefSeq mRNA;Acc:NM_001030340]
44. FHL3 ENSGALG00000035187 9753 0.98 - - - - - - 0.980 - - - four and a half LIM domains 3 [Source:HGNC Symbol;Acc:HGNC:3704]
45. SERBP1 ENSGALG00000011229 30489 0.98 - - - - - - 0.980 - - - SERPINE1 mRNA binding protein 1 [Source:NCBI gene;Acc:424706]
46. CCAR1 ENSGALG00000004108 13219 0.978 - - - - - - 0.978 - - - cell division cycle and apoptosis regulator 1 [Source:HGNC Symbol;Acc:HGNC:24236]
47. POLR2C ENSGALG00000001168 10703 0.977 - - - - - - 0.977 - - - RNA polymerase II subunit C [Source:NCBI gene;Acc:415635]
48. ANLN 10479 0.977 - - - - - - 0.977 - - - anillin actin binding protein, transcript variant X2
49. PSMD13 ENSGALG00000043684 14720 0.976 - - - - - - 0.976 - - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
50. MRPS26 ENSGALG00000014118 27422 0.976 - - - - - - 0.976 - - - mitochondrial ribosomal protein S26 [Source:NCBI gene;Acc:426561]
51. CNBP 42704 0.975 - - - - - - 0.975 - - - CCHC-type zinc finger nucleic acid binding protein, transcript variant X7
52. CDC5L ENSGALG00000016704 22893 0.975 - - - - - - 0.975 - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
53. EPHA3 ENSGALG00000015403 9811 0.975 - - - - - - 0.975 - - - EPH receptor A3 [Source:NCBI gene;Acc:396402]
54. SH3RF3 ENSGALG00000016810 2169 0.975 - - - - - - 0.975 - - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
55. ABRACL ENSGALG00000013826 19445 0.974 - - - - - - 0.974 - - - ABRA C-terminal like [Source:NCBI gene;Acc:770205]
56. MRPS15 ENSGALG00000044433 15356 0.974 - - - - - - 0.974 - - - mitochondrial ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:14504]
57. RPF1 ENSGALG00000008796 9809 0.973 - - - - - - 0.973 - - - ribosome production factor 1 homolog
58. FGD5 ENSGALG00000008546 4031 0.972 - - - - - - 0.972 - - - FYVE, RhoGEF and PH domain containing 5 [Source:HGNC Symbol;Acc:HGNC:19117]
59. MRPS36 ENSGALG00000014789 7584 0.972 - - - - - - 0.972 - - - mitochondrial ribosomal protein S36 [Source:HGNC Symbol;Acc:HGNC:16631]
60. MOB4 ENSGALG00000008128 10322 0.97 - - - - - - 0.970 - - - MOB family member 4, phocein [Source:NCBI gene;Acc:429007]
61. DDX1 ENSGALG00000016461 15157 0.968 - - - - - - - 0.968 - - DEAD-box helicase 1 [Source:NCBI gene;Acc:395249]
62. PELI1 ENSGALG00000008837 11561 0.967 - - - - - - 0.967 - - - pellino E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421279]
63. OLFML1 ENSGALG00000027184 19 0.966 - - - - - 0.966 - - - - olfactomedin like 1 [Source:HGNC Symbol;Acc:HGNC:24473]
64. KIF7 ENSGALG00000006611 33 0.966 - - - - - 0.966 - - - - kinesin family member 7 [Source:HGNC Symbol;Acc:HGNC:30497]
65. SH2D1B ENSGALG00000028448 17 0.966 - - - - - 0.966 - - - - SH2 domain containing 1B [Source:NCBI gene;Acc:418411]
66. PACSIN2 ENSGALG00000014159 601 0.964 - - - - - 0.964 - - - - protein kinase C and casein kinase substrate in neurons 2 [Source:NCBI gene;Acc:395975]
67. HJURP ENSGALG00000015363 54 0.964 - - - - - 0.964 - - - - Holliday junction recognition protein [Source:NCBI gene;Acc:418413]
68. GPD1L2 ENSGALG00000012061 31 0.963 - - - - - 0.963 - - - - glycerol-3-phosphate dehydrogenase 1-like 2
69. CCT5 ENSGALG00000013041 56190 0.963 - - - - - - 0.963 - - - chaperonin containing TCP1 subunit 5 [Source:NCBI gene;Acc:420930]
70. AQP1 ENSGALG00000005209 111 0.962 - - - - - 0.962 - - - - aquaporin 1 [Source:NCBI gene;Acc:420384]
71. CDC20 ENSGALG00000009971 11197 0.961 - - - - - - - 0.961 - - cell division cycle 20 [Source:NCBI gene;Acc:424563]
72. RAC3 ENSGALG00000040606 355 0.961 - - - - - 0.961 - - - - Rac family small GTPase 3 [Source:NCBI gene;Acc:395870]
73. ENSGALG00000013825 ENSGALG00000013825 16473 0.96 - - - - - - 0.960 - - -
74. BRE 10440 0.96 - - - - - - - 0.960 - - brain and reproductive organ-expressed (TNFRSF1A modulator), transcript variant X2
75. MCC ENSGALG00000000208 61 0.959 - - - - - 0.959 - - - - MCC, WNT signaling pathway regulator [Source:HGNC Symbol;Acc:HGNC:6935]
76. ENSGALG00000002946 ENSGALG00000002946 56 0.959 - - - - - 0.959 - - - -
77. DRD4 ENSGALG00000040761 79 0.958 - - - - - 0.958 - - - - dopamine receptor D4 [Source:NCBI gene;Acc:423016]
78. ISL1 ENSGALG00000014884 7666 0.957 - - - - - - - 0.957 - - ISL LIM homeobox 1 [Source:NCBI gene;Acc:396383]
79. TBL1X ENSGALG00000040006 28597 0.957 - - - - - - 0.957 - - - transducin beta like 1 X-linked [Source:NCBI gene;Acc:426045]
80. C1orf168 C1orf168 98 0.956 - - - - - 0.956 - - - -
81. NIPAL4 ENSGALG00000039687 29 0.953 - - - - - 0.953 - - - - NIPA like domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28018]
82. ZDHHC6 ENSGALG00000008870 16575 0.953 - - - - - - 0.953 - - - zinc finger DHHC-type containing 6 [Source:HGNC Symbol;Acc:HGNC:19160]
83. SCAF8 ENSGALG00000013635 421 0.953 - - - - - 0.953 - - - - SR-related CTD associated factor 8 [Source:HGNC Symbol;Acc:HGNC:20959]
84. LOC419851 ENSGALG00000023953 80 0.952 - - - - - 0.952 - - - - complement component 4 binding protein, alpha chain
85. CLASP1 ENSGALG00000011645 1378 0.952 - - - - - 0.952 - - - - cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]
86. ADNP2 ENSGALG00000035669 318 0.951 - - - - - 0.951 - - - - ADNP homeobox 2 [Source:HGNC Symbol;Acc:HGNC:23803]
87. MED1 ENSGALG00000001708 9556 0.95 - - - - - - 0.950 - - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
88. TRIB2 ENSGALG00000016457 17641 0.949 - - - - - - 0.949 - - - tribbles pseudokinase 2 [Source:NCBI gene;Acc:378919]
89. BLVRA ENSGALG00000031786 23 0.949 - - - - - 0.949 - - - - biliverdin reductase A [Source:HGNC Symbol;Acc:HGNC:1062]
90. TTC7A ENSGALG00000010020 793 0.948 - - - - - 0.948 - - - - tetratricopeptide repeat domain 7A [Source:NCBI gene;Acc:421414]
91. GTF3C4 ENSGALG00000031016 1221 0.948 - - - - - 0.948 - - - - general transcription factor IIIC subunit 4 [Source:HGNC Symbol;Acc:HGNC:4667]
92. SMOC2 ENSGALG00000011205 340 0.947 - - - - - 0.947 - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
93. DIAPH3 ENSGALG00000016937 1069 0.946 - - - - - 0.946 - - - - diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
94. PRDX1 ENSGALG00000010243 151918 0.946 - - - - - - 0.946 - - - peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
95. TPI1 ENSGALG00000014526 43273 0.946 - - - - - - 0.946 - - - triosephosphate isomerase 1 [Source:NCBI gene;Acc:396435]
96. EZH2 ENSGALG00000043399 15881 0.945 - - - - - - 0.945 - - - enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]
97. ELMSAN1 ENSGALG00000009282 79 0.945 - - - - - 0.945 - - - - ELM2 and Myb/SANT domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19853]
98. COBL ENSGALG00000013102 84 0.944 - - - - - 0.944 - - - - cordon-bleu WH2 repeat protein [Source:HGNC Symbol;Acc:HGNC:22199]
99. BUB3 ENSGALG00000009681 36055 0.944 - - - - - - 0.944 - - - BUB3, mitotic checkpoint protein [Source:NCBI gene;Acc:423949]
100. SERPINB1 ENSGALG00000019555 29 0.943 - - - - - 0.943 - - - - serpin family B member 1 [Source:HGNC Symbol;Acc:HGNC:3311]

There are 334 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA