Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for PNN

Gene Name Gene ID Reads Annotation
PNN ENSGALG00000010167 6417 pinin, desmosome associated protein [Source:HGNC Symbol;Acc:HGNC:9162]











Genes with expression patterns similar to PNN

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PNN ENSGALG00000010167 6417 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 pinin, desmosome associated protein [Source:HGNC Symbol;Acc:HGNC:9162]
2. GKAP1 ENSGALG00000012586 2908 1.684 0.754 - - - - - - 0.930 - - G kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:17496]
3. TOP2A ENSGALG00000003922 7726 1.527 0.814 0.713 - - - - - - - - topoisomerase (DNA) II alpha [Source:NCBI gene;Acc:395570]
4. PABPC1 ENSGALG00000030280 23934 1.471 0.760 - 0.711 - - - - - - - poly(A) binding protein cytoplasmic 1 [Source:NCBI gene;Acc:430997]
5. ANKRD17 ENSGALG00000011642 3192 1.422 0.713 - - - - - - - 0.709 - ankyrin repeat domain 17 [Source:HGNC Symbol;Acc:HGNC:23575]
6. ATP1B3 ENSGALG00000002764 1890 0.958 - - - - - - - 0.958 - - ATPase Na+/K+ transporting subunit beta 3 [Source:NCBI gene;Acc:396549]
7. HOOK1 ENSGALG00000010889 1007 0.956 - - - - - - - 0.956 - - hook microtubule tethering protein 1 [Source:NCBI gene;Acc:424675]
8. TXNDC11 ENSGALG00000003154 2224 0.949 - - - - - - - 0.949 - - thioredoxin domain containing 11 [Source:HGNC Symbol;Acc:HGNC:28030]
9. SMG8 ENSGALG00000005093 5557 0.948 - - - - - - - 0.948 - - SMG8 nonsense mediated mRNA decay factor
10. TICAM1 ENSGALG00000026850 723 0.946 - - - - - - - 0.946 - - toll like receptor adaptor molecule 1 [Source:NCBI gene;Acc:100008585]
11. KIAA1009 KIAA1009 1261 0.945 - - - - - - - 0.945 - -
12. EPGN ENSGALG00000010859 187 0.945 - - - - - - - 0.945 - - epithelial mitogen [Source:NCBI gene;Acc:497270]
13. MTIF2 ENSGALG00000031265 2366 0.943 - - - - - - - 0.943 - - mitochondrial translational initiation factor 2 [Source:NCBI gene;Acc:421213]
14. LRIG3 ENSGALG00000009755 6655 0.943 - - - - - - - 0.943 - - leucine rich repeats and immunoglobulin like domains 3 [Source:NCBI gene;Acc:417813]
15. TPM3 ENSGALG00000013537 934 0.942 - - - - - - - 0.942 - - Gallus gallus tropomyosin 3 (TPM3), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001352039]
16. G2E3 ENSGALG00000009907 1754 0.942 - - - - - - - 0.942 - - G2/M-phase specific E3 ubiquitin protein ligase [Source:NCBI gene;Acc:423305]
17. GP1BB ENSGALG00000021529 348 0.942 - - - - - - - 0.942 - - glycoprotein Ib platelet subunit beta [Source:HGNC Symbol;Acc:HGNC:4440]
18. PDZD8 ENSGALG00000029095 1068 0.941 - - - - - - - 0.941 - - PDZ domain containing 8 [Source:HGNC Symbol;Acc:HGNC:26974]
19. BRCA1 ENSGALG00000002781 2052 0.94 - - - - - - - 0.940 - - BRCA1, DNA repair associated [Source:NCBI gene;Acc:373983]
20. APBB2 ENSGALG00000014262 569 0.939 - - - - - - - 0.939 - - amyloid beta precursor protein binding family B member 2 [Source:HGNC Symbol;Acc:HGNC:582]
21. ARNTL2 ENSGALG00000014096 998 0.939 - - - - - - - 0.939 - - aryl hydrocarbon receptor nuclear translocator-like 2 [Source:NCBI gene;Acc:373925]
22. NT5C3B ENSGALG00000003651 5190 0.939 - - - - - - - 0.939 - - 5'-nucleotidase, cytosolic IIIB [Source:NCBI gene;Acc:420034]
23. CLCN5 ENSGALG00000007234 1143 0.939 - - - - - - - 0.939 - - chloride voltage-gated channel 5 [Source:HGNC Symbol;Acc:HGNC:2023]
24. SLC25A28 ENSGALG00000007479 4902 0.939 - - - - - - - 0.939 - - solute carrier family 25 member 28 [Source:HGNC Symbol;Acc:HGNC:23472]
25. ENSGALG00000021439 ENSGALG00000021439 628 0.939 - - - - - - - 0.939 - -
26. SPATA2 ENSGALG00000008026 2040 0.938 - - - - - - - 0.938 - - spermatogenesis associated 2 [Source:NCBI gene;Acc:419355]
27. CCDC80 ENSGALG00000015193 1387 0.937 - - - - - - - 0.937 - - coiled-coil domain containing 80 [Source:NCBI gene;Acc:395074]
28. CRABP2 ENSGALG00000029140 559 0.937 - - - - - - - 0.937 - - cellular retinoic acid binding protein 2 [Source:HGNC Symbol;Acc:HGNC:2339]
29. ABHD12B ENSGALG00000020342 511 0.937 - - - - - - - 0.937 - - abhydrolase domain containing 12B, transcript variant X2
30. HAGHL ENSGALG00000021040 1568 0.936 - - - - - - - 0.936 - - hydroxyacylglutathione hydrolase-like [Source:NCBI gene;Acc:416536]
31. ASTN2 ENSGALG00000007038 1748 0.936 - - - - - - - 0.936 - - astrotactin 2 [Source:HGNC Symbol;Acc:HGNC:17021]
32. NRG1 ENSGALG00000015422 196 0.935 - - - - - - - 0.935 - - neuregulin 1 [Source:NCBI gene;Acc:373906]
33. TRPC1 ENSGALG00000002639 296 0.935 - - - - - - - 0.935 - - transient receptor potential cation channel subfamily C member 1 [Source:NCBI gene;Acc:424776]
34. NPR2 ENSGALG00000027630 871 0.935 - - - - - - - 0.935 - - natriuretic peptide receptor 2 [Source:HGNC Symbol;Acc:HGNC:7944]
35. DMA DMA 1012 0.935 - - - - - - - 0.935 - -
36. RBM46 ENSGALG00000009278 98 0.935 - - - - - - - 0.935 - - RNA binding motif protein 46 [Source:HGNC Symbol;Acc:HGNC:28401]
37. PAIP1 ENSGALG00000014867 202 0.935 - - - - - - - 0.935 - - poly(A) binding protein interacting protein 1 [Source:NCBI gene;Acc:427195]
38. RFX7 ENSGALG00000041896 69 0.934 - - - - - - - 0.934 - - regulatory factor X7 [Source:HGNC Symbol;Acc:HGNC:25777]
39. ENSGALG00000011233 ENSGALG00000011233 42 0.934 - - - - - - - 0.934 - -
40. ANGPTL1 ENSGALG00000004290 1922 0.933 - - - - - - - 0.933 - - angiopoietin like 1 [Source:NCBI gene;Acc:770850]
41. RIMKLB ENSGALG00000040184 281 0.932 - - - - - - - 0.932 - - ribosomal modification protein rimK like family member B [Source:HGNC Symbol;Acc:HGNC:29228]
42. SPATA2L ENSGALG00000044991 463 0.932 - - - - - - - 0.932 - - spermatogenesis associated 2 like [Source:HGNC Symbol;Acc:HGNC:28393]
43. NPL ENSGALG00000004614 617 0.931 - - - - - - - 0.931 - - N-acetylneuraminate pyruvate lyase [Source:NCBI gene;Acc:429074]
44. USP28 ENSGALG00000006969 2645 0.931 - - - - - - - 0.931 - - ubiquitin specific peptidase 28 [Source:NCBI gene;Acc:428246]
45. SRR ENSGALG00000003155 93 0.931 - - - - - - - 0.931 - - serine racemase [Source:HGNC Symbol;Acc:HGNC:14398]
46. ZNF750 ENSGALG00000001518 151 0.93 - - - - - - - 0.930 - - zinc finger protein 750 [Source:HGNC Symbol;Acc:HGNC:25843]
47. MURC 3759 0.93 - - - - - - - 0.930 - - muscle related coiled-coil protein
48. CCDC117 ENSGALG00000005784 185 0.929 - - - - - - - 0.929 - - coiled-coil domain containing 117 [Source:HGNC Symbol;Acc:HGNC:26599]
49. ENSGALG00000018634 ENSGALG00000018634 414 0.928 - - - - - - - 0.928 - -
50. BUD13 ENSGALG00000025882 1800 0.927 - - - - - - - 0.927 - - BUD13 homolog [Source:NCBI gene;Acc:428248]
51. TMEM161A ENSGALG00000025809 2813 0.927 - - - - - - - 0.927 - - transmembrane protein 161A [Source:HGNC Symbol;Acc:HGNC:26020]
52. AIP ENSGALG00000040247 4166 0.926 - - - - - - - 0.926 - - aryl hydrocarbon receptor interacting protein [Source:NCBI gene;Acc:395123]
53. MAOB ENSGALG00000032836 1054 0.926 - - - - - - - 0.926 - - monoamine oxidase B
54. UBN1 ENSGALG00000031416 2848 0.926 - - - - - - - 0.926 - - ubinuclein 1 [Source:NCBI gene;Acc:416398]
55. MTUS1 ENSGALG00000013615 1040 0.923 - - - - - - - 0.923 - - microtubule associated tumor suppressor 1, transcript variant X4
56. RASA3 ENSGALG00000016817 2146 0.923 - - - - - - - 0.923 - - RAS p21 protein activator 3 [Source:NCBI gene;Acc:418736]
57. SELENBP1 ENSGALG00000000866 1253 0.923 - - - - - - - 0.923 - - selenium binding protein 1 [Source:NCBI gene;Acc:425664]
58. EML1 1941 0.923 - - - - - - - 0.923 - - echinoderm microtubule associated protein like 1, transcript variant X11
59. NUDT6 ENSGALG00000011834 1309 0.922 - - - - - - - 0.922 - - nudix hydrolase 6 [Source:HGNC Symbol;Acc:HGNC:8053]
60. TCTN2 ENSGALG00000023683 3596 0.922 - - - - - - - 0.922 - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
61. ZBTB18 ENSGALG00000010705 3433 0.921 - - - - - - - 0.921 - - zinc finger and BTB domain containing 18 [Source:HGNC Symbol;Acc:HGNC:13030]
62. PKN3 532 0.92 - - - - - - - 0.920 - - protein kinase N3, transcript variant X2
63. PCYOX1 ENSGALG00000013878 2200 0.918 - - - - - - - 0.918 - - prenylcysteine oxidase 1 [Source:HGNC Symbol;Acc:HGNC:20588]
64. KIF21B ENSGALG00000034347 4144 0.917 - - - - - - - 0.917 - - kinesin family member 21B [Source:HGNC Symbol;Acc:HGNC:29442]
65. PPP2R3A ENSGALG00000034512 1091 0.916 - - - - - - - 0.916 - - protein phosphatase 2 regulatory subunit B''alpha [Source:HGNC Symbol;Acc:HGNC:9307]
66. FGFR1 ENSGALG00000039786 4480 0.916 - - - - - - - 0.916 - - fibroblast growth factor receptor 1 [Source:NCBI gene;Acc:396516]
67. AGRN ENSGALG00000039193 8135 0.916 - - - - - - - 0.916 - - agrin [Source:NCBI gene;Acc:396538]
68. SH3TC1 ENSGALG00000015568 484 0.914 - - - - - - - 0.914 - - SH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:26009]
69. SLC19A1 ENSGALG00000030511 1397 0.914 - - - - - - - 0.914 - - solute carrier family 19 member 1 [Source:NCBI gene;Acc:424034]
70. ITFG1 ENSGALG00000004049 2934 0.913 - - - - - - - 0.913 - - integrin alpha FG-GAP repeat containing 1 [Source:NCBI gene;Acc:415742]
71. RCAN3 ENSGALG00000004282 7778 0.912 - - - - - - - 0.912 - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
72. ZNF384 ENSGALG00000032599 2369 0.911 - - - - - - - 0.911 - - zinc finger protein 384 [Source:NCBI gene;Acc:770350]
73. TTC38 ENSGALG00000014551 1135 0.911 - - - - - - - 0.911 - - tetratricopeptide repeat domain 38 [Source:HGNC Symbol;Acc:HGNC:26082]
74. DOCK10 ENSGALG00000005030 848 0.909 - - - - - - - 0.909 - - dedicator of cytokinesis 10 [Source:HGNC Symbol;Acc:HGNC:23479]
75. MMP15 ENSGALG00000038758 49988 0.907 - - - - - - - 0.907 - - matrix metallopeptidase 15 [Source:HGNC Symbol;Acc:HGNC:7161]
76. FBXL8 ENSGALG00000003201 847 0.906 - - - - - - - 0.906 - - F-box and leucine rich repeat protein 8 [Source:NCBI gene;Acc:415701]
77. LIMS1 ENSGALG00000029970 7244 0.904 - - - - - - - 0.904 - - LIM zinc finger domain containing 1 [Source:NCBI gene;Acc:414880]
78. KLF6 ENSGALG00000033178 679 0.903 - - - - - - - 0.903 - - Kruppel like factor 6 [Source:NCBI gene;Acc:420463]
79. ERMARD ENSGALG00000011186 1001 0.903 - - - - - - - 0.903 - - ER membrane associated RNA degradation [Source:HGNC Symbol;Acc:HGNC:21056]
80. EFCAB10 ENSGALG00000045949 514 0.901 - - - - - - - 0.901 - - EF-hand calcium binding domain 10 [Source:HGNC Symbol;Acc:HGNC:34531]
81. ENTPD4 ENSGALG00000000390 1394 0.901 - - - - - - - 0.901 - - ectonucleoside triphosphate diphosphohydrolase 4 [Source:HGNC Symbol;Acc:HGNC:14573]
82. BACE2 ENSGALG00000034932 1570 0.9 - - - - - - - 0.900 - - beta-secretase 2 [Source:HGNC Symbol;Acc:HGNC:934]
83. PECR ENSGALG00000011497 1714 0.9 - - - - - - - 0.900 - - peroxisomal trans-2-enoyl-CoA reductase [Source:NCBI gene;Acc:424224]
84. CCNL2 ENSGALG00000001551 2620 0.898 - - - - - - - 0.898 - - cyclin L2 [Source:NCBI gene;Acc:395124]
85. NPAT ENSGALG00000017162 1574 0.898 - - - - - - - 0.898 - - nuclear protein, coactivator of histone transcription [Source:HGNC Symbol;Acc:HGNC:7896]
86. ITFG2 ENSGALG00000014335 1896 0.896 - - - - - - - 0.896 - - integrin alpha FG-GAP repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:30879]
87. CPT2 ENSGALG00000010681 3211 0.896 - - - - - - - 0.896 - - carnitine palmitoyltransferase 2 [Source:NCBI gene;Acc:424649]
88. CLMP ENSGALG00000006507 8079 0.895 - - - - - - - 0.895 - - CXADR like membrane protein [Source:HGNC Symbol;Acc:HGNC:24039]
89. NCAPH ENSGALG00000032270 2103 0.89 - - - - - - - 0.890 - - non-SMC condensin I complex subunit H [Source:NCBI gene;Acc:425304]
90. AGGF1 ENSGALG00000004311 3011 0.889 - - - - - - - 0.889 - - angiogenic factor with G-patch and FHA domains 1, transcript variant X1
91. HDAC1 ENSGALG00000003297 3528 0.889 - - - - - - - 0.889 - - histone deacetylase 1 [Source:NCBI gene;Acc:373961]
92. VPS13D ENSGALG00000034777 2350 0.888 - - - - - - - 0.888 - - vacuolar protein sorting 13 homolog D [Source:HGNC Symbol;Acc:HGNC:23595]
93. FBXL17 ENSGALG00000000276 2443 0.887 - - - - - - - 0.887 - - F-box and leucine rich repeat protein 17 [Source:HGNC Symbol;Acc:HGNC:13615]
94. BCAS3 ENSGALG00000005295 2595 0.886 - - - - - - - 0.886 - - BCAS3, microtubule associated cell migration factor [Source:HGNC Symbol;Acc:HGNC:14347]
95. POLR1B ENSGALG00000032273 3845 0.886 - - - - - - - 0.886 - - RNA polymerase I subunit B [Source:HGNC Symbol;Acc:HGNC:20454]
96. HYAL1 ENSGALG00000000785 1778 0.886 - - - - - - - 0.886 - - hyaluronoglucosaminidase 1, transcript variant X3
97. ACBD5 ENSGALG00000007519 1646 0.884 - - - - - - - 0.884 - - acyl-CoA binding domain containing 5 [Source:NCBI gene;Acc:420488]
98. LBP ENSGALG00000006756 1684 0.881 - - - - - - - 0.881 - - lipopolysaccharide binding protein, transcript variant X1
99. BUD13_1 ENSGALG00000025882 1118 0.88 - - - - - - - 0.880 - - BUD13 homolog [Source:NCBI gene;Acc:428248]
100. IL1RL1 ENSGALG00000016785 928 0.878 - - - - - - - 0.878 - - interleukin 1 receptor like 1 [Source:NCBI gene;Acc:374136]

There are 134 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA