Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PMS1

Gene Name Gene ID Reads Annotation
PMS1 ENSGALG00000034011 2031 PMS1 homolog 1, mismatch repair system component [Source:NCBI gene;Acc:423980]











Genes with expression patterns similar to PMS1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PMS1 ENSGALG00000034011 2031 9 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 PMS1 homolog 1, mismatch repair system component [Source:NCBI gene;Acc:423980]
2. IL2RB ENSGALG00000012472 7 0.819 - - - - - 0.819 - - - - Gallus gallus interleukin 2 receptor subunit beta (IL2RB), mRNA. [Source:RefSeq mRNA;Acc:NM_001318989]
3. MAP3K5 ENSGALG00000013892 565 0.812 - - - - - 0.812 - - - - mitogen-activated protein kinase kinase kinase 5 [Source:HGNC Symbol;Acc:HGNC:6857]
4. ENSGALG00000001398 ENSGALG00000001398 3248 0.808 - - - - 0.808 - - - - -
5. CBX8 ENSGALG00000026548 1063 0.805 - - - - - - 0.805 - - - chromobox 8 [Source:HGNC Symbol;Acc:HGNC:15962]
6. Mar-02 Mar-02 7 0.8 - - - - - 0.800 - - - -
7. CDC14A ENSGALG00000005248 502 0.797 - - - - - - - 0.797 - - cell division cycle 14A [Source:NCBI gene;Acc:424466]
8. uc_6 uc_6 14 0.793 - - - - - 0.793 - - - -
9. CYP3A4 ENSGALG00000004436 75 0.792 - - - - - - - - - 0.792 Gallus gallus cytochrome P450 family 3 subfamily A member 4 (CYP3A4), mRNA. [Source:RefSeq mRNA;Acc:NM_001329508]
10. LY86 ENSGALG00000012801 865 0.791 - - - - - 0.791 - - - - lymphocyte antigen 86 [Source:NCBI gene;Acc:420872]
11. CRLS1 ENSGALG00000009214 8652 0.79 - - - - - - 0.790 - - - cardiolipin synthase 1 [Source:HGNC Symbol;Acc:HGNC:16148]
12. C16orf72 ENSGALG00000007291 228 0.786 - - - - - 0.786 - - - - chromosome 16 open reading frame 72 [Source:HGNC Symbol;Acc:HGNC:30103]
13. RFXANK ENSGALG00000037261 2432 0.785 - - - - - 0.785 - - - - regulatory factor X associated ankyrin containing protein [Source:NCBI gene;Acc:426623]
14. FANCE ENSGALG00000002561 3532 0.783 - - - - - 0.783 - - - - Fanconi anemia complementation group E
15. ELF1 ENSGALG00000016947 2769 0.781 - - - - - - - 0.781 - - E74 like ETS transcription factor 1 [Source:NCBI gene;Acc:418828]
16. AHCTF1 ENSGALG00000010630 4809 0.776 - - - - - - 0.776 - - - AT-hook containing transcription factor 1 [Source:NCBI gene;Acc:421484]
17. PLXNC1 ENSGALG00000011309 69 0.775 - - - - - - - - - 0.775 plexin C1 [Source:HGNC Symbol;Acc:HGNC:9106]
18. MARVELD3 ENSGALG00000012886 155 0.773 - - - - 0.773 - - - - - MARVEL domain containing 3
19. SRGAP2 ENSGALG00000000816 97 0.769 - - - - - - - - - 0.769 SLIT-ROBO Rho GTPase activating protein 2, transcript variant X11
20. KCTD20 ENSGALG00000000511 298 0.769 - - - - - - - - - 0.769 potassium channel tetramerization domain containing 20 [Source:HGNC Symbol;Acc:HGNC:21052]
21. VAV2 ENSGALG00000002699 503 0.768 - - - - - 0.768 - - - - vav guanine nucleotide exchange factor 2 [Source:NCBI gene;Acc:373938]
22. PFKL ENSGALG00000006543 4361 0.766 - - - - - - 0.766 - - - Gallus gallus phosphofructokinase, liver type (PFKL), mRNA. [Source:RefSeq mRNA;Acc:NM_001318442]
23. LOC421584 ENSGALG00000011579 8 0.762 - - - - - - - - - 0.762 solute carrier family 22 member 2-like
24. HOMER3_1 ENSGALG00000003058, ENSGALG00000003074 1364 0.759 - - - - - - - 0.759 - - homer scaffolding protein 3, transcript variant X4
25. SHCBP1 ENSGALG00000004444 59 0.759 - - - - - - - - - 0.759 SHC binding and spindle associated 1 [Source:HGNC Symbol;Acc:HGNC:29547]
26. S100A4 ENSGALG00000037599 280 0.759 - - - - - 0.759 - - - - S100 calcium binding protein A4
27. FHOD1 ENSGALG00000002198 426 0.758 - - - - - - - - - 0.758 formin homology 2 domain containing 1 [Source:NCBI gene;Acc:415672]
28. LRRC2 ENSGALG00000013634 69 0.758 - - - - - - - - - 0.758 leucine rich repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:14676]
29. DNAJA2 ENSGALG00000004115 1670 0.757 - - - - - - - - - 0.757 DnaJ heat shock protein family (Hsp40) member A2 [Source:NCBI gene;Acc:415744]
30. ENSGALG00000002903 ENSGALG00000002903 18304 0.756 - - - - - - 0.756 - - -
31. CPN2 ENSGALG00000045776 18 0.755 - - - - - - - - - 0.755 carboxypeptidase N subunit 2
32. NUDT15 ENSGALG00000016994 210 0.755 - - - - - - - - - 0.755 nudix hydrolase 15 [Source:HGNC Symbol;Acc:HGNC:23063]
33. CIRH1A CIRH1A 6975 0.754 - - - - - - 0.754 - - -
34. MKNK1 ENSGALG00000010440 196 0.753 - - - - - - - - - 0.753 MAP kinase interacting serine/threonine kinase 1 [Source:HGNC Symbol;Acc:HGNC:7110]
35. TRIM37 ENSGALG00000005084 4036 0.753 - - - - - - - 0.753 - - tripartite motif containing 37 [Source:NCBI gene;Acc:417628]
36. PLRG1 ENSGALG00000009257 8613 0.753 - - - - - - 0.753 - - - pleiotropic regulator 1 [Source:HGNC Symbol;Acc:HGNC:9089]
37. CDON ENSGALG00000035419 2240 0.752 - - - - - - 0.752 - - - cell adhesion associated, oncogene regulated [Source:HGNC Symbol;Acc:HGNC:17104]
38. PRPSAP2 ENSGALG00000005064 5549 0.752 - - - - - - 0.752 - - - phosphoribosyl pyrophosphate synthetase associated protein 2 [Source:NCBI gene;Acc:416521]
39. MADCAM1 ENSGALG00000028341 6 0.752 - - - - - 0.752 - - - - mucosal vascular addressin cell adhesion molecule 1
40. KCNE3 ENSGALG00000022696 561 0.752 - - - - - 0.752 - - - - potassium voltage-gated channel subfamily E regulatory subunit 3 [Source:HGNC Symbol;Acc:HGNC:6243]
41. STARD5 ENSGALG00000021193 315 0.752 - - - - - - - - - 0.752 StAR related lipid transfer domain containing 5 [Source:HGNC Symbol;Acc:HGNC:18065]
42. RANBP3L 19 0.751 - - - - - - - - - 0.751 RAN binding protein 3 like, transcript variant X2
43. PITPNM2 ENSGALG00000003645 17 0.751 - - - - - - - - - 0.751 phosphatidylinositol transfer protein membrane associated 2 [Source:HGNC Symbol;Acc:HGNC:21044]
44. RAP2C ENSGALG00000006061 11 0.751 - - - - - - - - - 0.751 RAP2C, member of RAS oncogene family [Source:NCBI gene;Acc:422232]
45. ENSGALG00000000188 ENSGALG00000000188 11 0.751 - - - - - - - - - 0.751
46. SLC39A8 ENSGALG00000012298 9 0.751 - - - - - - - - - 0.751 solute carrier family 39 member 8 [Source:HGNC Symbol;Acc:HGNC:20862]
47. PHF10 ENSGALG00000011192 361 0.75 - - - - - - - - - 0.750 PHD finger protein 10 [Source:HGNC Symbol;Acc:HGNC:18250]
48. KIAA1045 KIAA1045 23 0.75 - - - - - - - - - 0.750
49. OIT3 ENSGALG00000004345 4886 0.75 - - - - - - - - - 0.750 oncoprotein induced transcript 3 [Source:HGNC Symbol;Acc:HGNC:29953]
50. N6AMT2 N6AMT2 4703 0.749 - - - - - 0.749 - - - -
51. CASR ENSGALG00000038405 53 0.749 - - - - - 0.749 - - - - calcium sensing receptor [Source:HGNC Symbol;Acc:HGNC:1514]
52. PHF21A ENSGALG00000008403 3090 0.748 - - - - - 0.748 - - - - PHD finger protein 21A [Source:NCBI gene;Acc:423199]
53. EVA1CL ENSGALG00000004734 168 0.748 - - - - - 0.748 - - - - protein eva-1 homolog C-like, transcript variant X2
54. gga-mir-6599 ENSGALG00000028121 4746 0.748 - - - - - - 0.748 - - - gga-mir-6599 [Source:miRBase;Acc:MI0022544]
55. RBBP7 ENSGALG00000016546 2442 0.748 - - - - - - 0.748 - - - RB binding protein 7, chromatin remodeling factor [Source:NCBI gene;Acc:395390]
56. RABEPK ENSGALG00000042210 4492 0.748 - - - - - - 0.748 - - - Rab9 effector protein with kelch motifs [Source:NCBI gene;Acc:772357]
57. PAXIP1 ENSGALG00000036064 3120 0.748 - - - - - - 0.748 - - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
58. LY96 ENSGALG00000032701 18 0.747 - - - - - 0.747 - - - - lymphocyte antigen 96 [Source:HGNC Symbol;Acc:HGNC:17156]
59. AGO1 ENSGALG00000002249 125 0.747 - - - - - 0.747 - - - - argonaute 1, RISC catalytic component [Source:NCBI gene;Acc:428222]
60. NABP1 ENSGALG00000025884 4195 0.747 - - - - - 0.747 - - - - nucleic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:26232]
61. DPP10 ENSGALG00000012156 20 0.747 - - - - - 0.747 - - - - dipeptidyl peptidase like 10 [Source:HGNC Symbol;Acc:HGNC:20823]
62. PVALB1 PVALB1 267 0.747 - - - - - 0.747 - - - -
63. ENSGALG00000014946 ENSGALG00000014946 40 0.747 - - - - - 0.747 - - - -
64. ALDH6A1 ENSGALG00000010211 29 0.747 - - - - - 0.747 - - - - aldehyde dehydrogenase 6 family member A1 [Source:HGNC Symbol;Acc:HGNC:7179]
65. TAB2 ENSGALG00000012356 3467 0.747 - - - - - - 0.747 - - - TGF-beta activated kinase 1 (MAP3K7) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17075]
66. ATP6V1AL ENSGALG00000000048 21 0.747 - - - - - 0.747 - - - - ATPase H+ transporting V1 subunit A-like, transcript variant X2
67. ENSGALG00000023485 ENSGALG00000023485 46 0.747 - - - - - 0.747 - - - -
68. PPM1L ENSGALG00000009537 5 0.747 - - - - - 0.747 - - - - protein phosphatase, Mg2+/Mn2+ dependent 1L [Source:HGNC Symbol;Acc:HGNC:16381]
69. FAM208B 24 0.747 - - - - - 0.747 - - - - family with sequence similarity 208 member B, transcript variant X3
70. PPIP5K1 ENSGALG00000008385 7 0.747 - - - - - 0.747 - - - - diphosphoinositol pentakisphosphate kinase 1 [Source:HGNC Symbol;Acc:HGNC:29023]
71. CLSPN ENSGALG00000002346 2590 0.746 - - - - - - 0.746 - - - claspin [Source:NCBI gene;Acc:428223]
72. TTC28 ENSGALG00000005676 36 0.746 - - - - - - - - - 0.746 tetratricopeptide repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29179]
73. ANKRD28 ENSGALG00000011226 160 0.746 - - - - - - - - - 0.746 ankyrin repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29024]
74. MRC1 ENSGALG00000008629 259 0.745 - - - - - 0.745 - - - - Gallus gallus mannose receptor C-type 1 (MRC1), mRNA. [Source:RefSeq mRNA;Acc:NM_001319007]
75. SERPINB5 ENSGALG00000012873 24 0.745 - - - - - - - - - 0.745 serpin family B member 5 [Source:HGNC Symbol;Acc:HGNC:8949]
76. TRPC4 ENSGALG00000017044 300 0.745 - - - - - 0.745 - - - - transient receptor potential cation channel subfamily C member 4 [Source:HGNC Symbol;Acc:HGNC:12336]
77. MCL1 ENSGALG00000044383 6874 0.745 - - - - - - - - - 0.745 Gallus gallus BCL2 family apoptosis regulator (MCL1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001319309]
78. LYVE1 ENSGALG00000005643 1230 0.745 - - - - - 0.745 - - - - lymphatic vessel endothelial hyaluronan receptor 1 [Source:NCBI gene;Acc:423038]
79. RPL35 ENSGALG00000035677 252113 0.744 - - - - - - 0.744 - - - ribosomal protein L35 [Source:NCBI gene;Acc:374133]
80. ACVR2A ENSGALG00000012444 324 0.744 - - - - 0.744 - - - - - activin A receptor type 2A [Source:NCBI gene;Acc:396324]
81. MAP7D3 1733 0.743 - - - - - - - - - 0.743 MAP7 domain containing 3
82. OSGEPL1 ENSGALG00000037727 1879 0.743 - - - - - - - - - 0.743 O-sialoglycoprotein endopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:23075]
83. BEND6 ENSGALG00000016283 319 0.742 - - - - - - - - - 0.742 BEN domain containing 6 [Source:HGNC Symbol;Acc:HGNC:20871]
84. HMBOX1 ENSGALG00000016633 247 0.742 - - - - - 0.742 - - - - homeobox containing 1 [Source:NCBI gene;Acc:422024]
85. UBE2G1 ENSGALG00000001441 1234 0.742 - - - - - 0.742 - - - - ubiquitin conjugating enzyme E2 G1 [Source:NCBI gene;Acc:770961]
86. KIAA1919 KIAA1919 58 0.741 - - - - - 0.741 - - - -
87. YTHDF1 ENSGALG00000005745 135 0.741 - - - - - - - - - 0.741 YTH N6-methyladenosine RNA binding protein 1 [Source:NCBI gene;Acc:419238]
88. NOC4L ENSGALG00000002272 9644 0.741 - - - - - - 0.741 - - - nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
89. SYT10 ENSGALG00000012911 17 0.741 - - - - 0.741 - - - - - synaptotagmin 10 [Source:HGNC Symbol;Acc:HGNC:19266]
90. RFK ENSGALG00000033558 1364 0.74 - - - - - - 0.740 - - - riboflavin kinase, transcript variant X3
91. AZI1 AZI1 6732 0.74 - - - - - - 0.740 - - -
92. URAH ENSGALG00000000549 484 0.74 - - - - - - - - - 0.740 5-hydroxyisourate hydrolase [Source:NCBI gene;Acc:415859]
93. PCDH12 ENSGALG00000002544 36 0.739 - - - - - 0.739 - - - - protocadherin 12 [Source:HGNC Symbol;Acc:HGNC:8657]
94. PRKAA1 ENSGALG00000014832 547 0.739 - - - - - - - - - 0.739 protein kinase AMP-activated catalytic subunit alpha 1 [Source:NCBI gene;Acc:427185]
95. APPBP2 ENSGALG00000005314 6447 0.738 - - - - - - 0.738 - - - amyloid beta precursor protein binding protein 2 [Source:NCBI gene;Acc:417645]
96. TMEM141 ENSGALG00000041390 8871 0.738 - - - - - - 0.738 - - - transmembrane protein 141 [Source:NCBI gene;Acc:417294]
97. C2CD5 ENSGALG00000013210 3060 0.738 - - - - - - 0.738 - - - C2 calcium dependent domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29062]
98. PYROXD1 ENSGALG00000013173 89 0.738 - - - - - - - - - 0.738 pyridine nucleotide-disulphide oxidoreductase domain 1 [Source:NCBI gene;Acc:418191]
99. MLF1IP MLF1IP 219 0.737 - - - - - - - - - 0.737
100. LRRC58 ENSGALG00000033186 15 0.736 - - - - - 0.736 - - - - leucine rich repeat containing 58 [Source:HGNC Symbol;Acc:HGNC:26968]

There are 121 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA