Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PMPCB

Gene Name Gene ID Reads Annotation
PMPCB ENSGALG00000008280 6357 peptidase, mitochondrial processing beta subunit [Source:NCBI gene;Acc:417718]











Genes with expression patterns similar to PMPCB

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PMPCB ENSGALG00000008280 6357 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 peptidase, mitochondrial processing beta subunit [Source:NCBI gene;Acc:417718]
2. USP54 ENSGALG00000005232 2749 1.805 - - - - - - 0.822 0.983 - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
3. LPAR1 ENSGALG00000015729 3874 1.789 - - - - - - 0.808 0.981 - - lysophosphatidic acid receptor 1 [Source:NCBI gene;Acc:427339]
4. TMEM135 2283 1.746 - - - - - - 0.767 0.979 - - transmembrane protein 135, transcript variant X4
5. TATDN1 ENSGALG00000041072 1585 1.725 - - - - - - - 0.978 - 0.747 TatD DNase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24220]
6. KIAA1191 ENSGALG00000003370 2599 1.714 - - - - - - 0.741 0.973 - - KIAA1191 [Source:NCBI gene;Acc:416230]
7. CEPT1 ENSGALG00000000142 4219 1.713 - - - - - - - 0.944 - 0.769 choline/ethanolamine phosphotransferase 1 [Source:NCBI gene;Acc:421152]
8. CA9 ENSGALG00000021340 1431 1.712 - - 0.743 - - - - 0.969 - - carbonic anhydrase 9 [Source:HGNC Symbol;Acc:HGNC:1383]
9. EIF2A ENSGALG00000010401 2201 1.697 - - - - - - - 0.971 - 0.726 eukaryotic translation initiation factor 2A [Source:NCBI gene;Acc:425042]
10. UPK3BL ENSGALG00000001885 1650 1.694 - - - - - - 0.761 0.933 - - uroplakin 3B-like
11. TBC1D32 ENSGALG00000014876 681 1.672 - - - - - - - 0.969 - 0.703 TBC1 domain family member 32 [Source:HGNC Symbol;Acc:HGNC:21485]
12. UBE2E3 ENSGALG00000020793 9517 1.66 - - 0.814 - - - - 0.846 - - ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
13. DIEXF ENSGALG00000009887 4782 1.613 - - - - - - 0.892 - - 0.721 digestive organ expansion factor homolog (zebrafish) [Source:NCBI gene;Acc:421384]
14. HNRNPLL ENSGALG00000008504 14719 1.595 - - - - - - 0.823 0.772 - - heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]
15. ZNF142 ENSGALG00000011393 2078 1.578 - - - - - - 0.810 - - 0.768 zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
16. MRPL15 ENSGALG00000041086 16820 1.569 - - - - - - - 0.846 - 0.723 mitochondrial ribosomal protein L15 [Source:NCBI gene;Acc:421121]
17. MBNL1 ENSGALG00000029190 3953 1.566 - - 0.727 - - - 0.839 - - - muscleblind like splicing regulator 1 [Source:NCBI gene;Acc:425033]
18. IWS1 ENSGALG00000001803 2305 1.566 - - 0.816 - - - - - - 0.750 IWS1, SUPT6H interacting protein [Source:HGNC Symbol;Acc:HGNC:25467]
19. SEC22B ENSGALG00000039704 16080 1.561 - - 0.771 - - - 0.790 - - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
20. RAB3IP ENSGALG00000009959 1652 1.538 - - 0.710 - - - 0.828 - - - RAB3A interacting protein, transcript variant X1
21. PRPF40A ENSGALG00000012526 7724 1.53 - - 0.772 - - - 0.758 - - - pre-mRNA processing factor 40 homolog A [Source:HGNC Symbol;Acc:HGNC:16463]
22. COQ7 ENSGALG00000006861 5118 1.53 - - - - - - 0.739 - - 0.791 coenzyme Q7, hydroxylase [Source:NCBI gene;Acc:416609]
23. IFT57 ENSGALG00000015356 5540 1.519 - - 0.760 - - - - 0.759 - - intraflagellar transport 57 [Source:HGNC Symbol;Acc:HGNC:17367]
24. ARHGAP19 ENSGALG00000007609 3655 1.511 - - - - - - 0.770 - - 0.741 Rho GTPase activating protein 19 [Source:NCBI gene;Acc:423846]
25. FLCN ENSGALG00000004816 4101 1.51 - - - - 0.707 - 0.803 - - - folliculin, transcript variant X1
26. EMC7 ENSGALG00000009637 4969 1.504 - - - - - - 0.761 - - 0.743 ER membrane protein complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:24301]
27. UBR7 ENSGALG00000010842 16488 1.498 - - - - - - - 0.782 - 0.716 Gallus gallus ubiquitin protein ligase E3 component n-recognin 7 (putative) (UBR7), mRNA. [Source:RefSeq mRNA;Acc:NM_001318461]
28. SNN ENSGALG00000028876 1687 1.498 - - 0.781 - - - - - - 0.717 stannin [Source:NCBI gene;Acc:416429]
29. RNF20 ENSGALG00000015548 7199 1.488 - - 0.711 - - - 0.777 - - - ring finger protein 20 [Source:NCBI gene;Acc:427310]
30. PPP1CC ENSGALG00000004571 14748 1.472 - - - - 0.750 - - - - 0.722 protein phosphatase 1 catalytic subunit gamma [Source:NCBI gene;Acc:416872]
31. PDIA5 ENSGALG00000011689 6913 1.468 - - 0.730 - 0.738 - - - - - protein disulfide isomerase family A member 5 [Source:HGNC Symbol;Acc:HGNC:24811]
32. ADARB1 ENSGALG00000007527 2480 1.454 - - - - - - 0.720 - - 0.734 adenosine deaminase, RNA specific B1 [Source:NCBI gene;Acc:374087]
33. TPGS2 ENSGALG00000026547 1967 1.45 - - - - 0.728 - - - - 0.722 tubulin polyglutamylase complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:24561]
34. ACOX1 ENSGALG00000002159 2953 1.441 - - 0.723 - - - - - - 0.718 acyl-CoA oxidase 1 [Source:NCBI gene;Acc:417366]
35. SCFD1 ENSGALG00000009916 5756 1.441 - - - - 0.713 - 0.728 - - - sec1 family domain containing 1 [Source:NCBI gene;Acc:423307]
36. DNAJC24 ENSGALG00000012130 1882 1.414 - - 0.710 - - - - - - 0.704 DnaJ heat shock protein family (Hsp40) member C24 [Source:NCBI gene;Acc:421603]
37. UTP20 ENSGALG00000011643 3012 0.982 - - - - - - - 0.982 - - UTP20, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:17897]
38. CDC7 ENSGALG00000006051 3996 0.981 - - - - - - - 0.981 - - cell division cycle 7 [Source:HGNC Symbol;Acc:HGNC:1745]
39. CXorf56 ENSGALG00000008652 7848 0.98 - - - - - - - 0.980 - - chromosome X open reading frame 56 [Source:HGNC Symbol;Acc:HGNC:26239]
40. GCN1L1 GCN1L1 4601 0.979 - - - - - - - 0.979 - -
41. RAB35 ENSGALG00000007308 6300 0.979 - - - - - - - 0.979 - - RAB35, member RAS oncogene family [Source:NCBI gene;Acc:416983]
42. EMG1 ENSGALG00000014568 8102 0.979 - - - - - - - 0.979 - - EMG1, N1-specific pseudouridine methyltransferase [Source:NCBI gene;Acc:418292]
43. RAB9A ENSGALG00000016579 3262 0.979 - - - - - - - 0.979 - - RAB9A, member RAS oncogene family [Source:NCBI gene;Acc:418635]
44. SFRP2 ENSGALG00000009241 4716 0.978 - - - - - - - 0.978 - - secreted frizzled related protein 2 [Source:NCBI gene;Acc:395546]
45. RPP38 ENSGALG00000008794 1057 0.978 - - - - - - - 0.978 - - ribonuclease P/MRP subunit p38 [Source:NCBI gene;Acc:420530]
46. NFU1 ENSGALG00000030200 6882 0.976 - - - - - - - 0.976 - - NFU1 iron-sulfur cluster scaffold [Source:NCBI gene;Acc:419513]
47. TMF1 ENSGALG00000013408 3344 0.976 - - - - - - - 0.976 - - TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]
48. JARID2 ENSGALG00000012702 4280 0.976 - - - - - - - 0.976 - - jumonji and AT-rich interaction domain containing 2 [Source:NCBI gene;Acc:420839]
49. DFFA ENSGALG00000002820 2046 0.976 - - - - - - - 0.976 - - DNA fragmentation factor subunit alpha [Source:HGNC Symbol;Acc:HGNC:2772]
50. MYBBP1A ENSGALG00000001363 10331 0.975 - - - - - - - 0.975 - - MYB binding protein 1a [Source:HGNC Symbol;Acc:HGNC:7546]
51. ATG13 ENSGALG00000008347 7374 0.975 - - - - - - - 0.975 - - autophagy related 13 [Source:HGNC Symbol;Acc:HGNC:29091]
52. ACOT13 ENSGALG00000013632 5550 0.975 - - - - - - - 0.975 - - acyl-CoA thioesterase 13 [Source:HGNC Symbol;Acc:HGNC:20999]
53. BET1 ENSGALG00000024485 2451 0.974 - - - - - - - 0.974 - - Bet1 golgi vesicular membrane trafficking protein [Source:NCBI gene;Acc:420563]
54. MGAT4B ENSGALG00000005924 2663 0.974 - - - - - - - 0.974 - - alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B [Source:HGNC Symbol;Acc:HGNC:7048]
55. BFAR ENSGALG00000003111 1778 0.974 - - - - - - - 0.974 - - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
56. USP25 ENSGALG00000015693 2567 0.974 - - - - - - - 0.974 - - ubiquitin specific peptidase 25 [Source:HGNC Symbol;Acc:HGNC:12624]
57. OXSR1 ENSGALG00000005979 2905 0.973 - - - - - - - 0.973 - - oxidative stress responsive 1
58. HSBP1 ENSGALG00000043039 2365 0.972 - - - - - - - 0.972 - - heat shock factor binding protein 1 [Source:NCBI gene;Acc:415813]
59. TMEM168 ENSGALG00000009443 2452 0.971 - - - - - - - 0.971 - - transmembrane protein 168, transcript variant X1
60. KLF5 ENSGALG00000016927 1080 0.971 - - - - - - - 0.971 - - Kruppel like factor 5 [Source:HGNC Symbol;Acc:HGNC:6349]
61. IRF2BPL ENSGALG00000041616 2835 0.971 - - - - - - - 0.971 - - interferon regulatory factor 2 binding protein like [Source:HGNC Symbol;Acc:HGNC:14282]
62. FBXO28 ENSGALG00000009331 2871 0.97 - - - - - - - 0.970 - - F-box protein 28 [Source:HGNC Symbol;Acc:HGNC:29046]
63. ENSGALG00000012564 ENSGALG00000012564 426 0.97 - - - - - - - 0.970 - -
64. AP3S1 ENSGALG00000002341 12388 0.97 - - - - - - - 0.970 - - adaptor related protein complex 3 sigma 1 subunit [Source:NCBI gene;Acc:427389]
65. WDFY1 ENSGALG00000005158 2512 0.969 - - - - - - - 0.969 - - WD repeat and FYVE domain containing 1 [Source:NCBI gene;Acc:424806]
66. COPG2 ENSGALG00000008144 4542 0.969 - - - - - - - 0.969 - - coatomer protein complex subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:2237]
67. ITPR1 ENSGALG00000008294 1226 0.969 - - - - - - - 0.969 - - inositol 1,4,5-trisphosphate receptor type 1 [Source:NCBI gene;Acc:395412]
68. LMAN2 ENSGALG00000033232 11740 0.968 - - - - - - - 0.968 - - lectin, mannose binding 2 [Source:HGNC Symbol;Acc:HGNC:16986]
69. ACSBG2 ENSGALG00000001749 1681 0.967 - - - - - - - 0.967 - - acyl-CoA synthetase bubblegum family member 2 [Source:NCBI gene;Acc:420090]
70. WDR36 ENSGALG00000000247 11277 0.967 - - - - - - - 0.967 - - WD repeat domain 36 [Source:NCBI gene;Acc:415609]
71. APC ENSGALG00000000220 1266 0.967 - - - - - - - 0.967 - - APC, WNT signaling pathway regulator, transcript variant X12
72. NPHP3 ENSGALG00000034586 1465 0.967 - - - - - - - 0.967 - - nephrocystin 3, transcript variant X1
73. RGCC ENSGALG00000016954 1282 0.967 - - - - - - - 0.967 - - regulator of cell cycle [Source:HGNC Symbol;Acc:HGNC:20369]
74. MAN2A2 ENSGALG00000033790 2717 0.966 - - - - - - - 0.966 - - mannosidase alpha class 2A member 2 [Source:HGNC Symbol;Acc:HGNC:6825]
75. SLC16A2 ENSGALG00000007748 446 0.966 - - - - - - - 0.966 - - Gallus gallus solute carrier family 16 member 2 (SLC16A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001321737]
76. CTTN ENSGALG00000007700 709 0.966 - - - - - - - 0.966 - - cortactin [Source:NCBI gene;Acc:396455]
77. AP1S2 ENSGALG00000016551 421 0.966 - - - - - - - 0.966 - - adaptor related protein complex 1 subunit sigma 2 [Source:NCBI gene;Acc:418621]
78. HES5 ENSGALG00000001141 6514 0.966 - - - - - - - 0.966 - - hes family bHLH transcription factor 5 [Source:NCBI gene;Acc:419392]
79. C3H6ORF154 C3H6ORF154 1078 0.965 - - - - - - - 0.965 - -
80. OSR2 ENSGALG00000037695 2010 0.965 - - - - - - - 0.965 - - odd-skipped related transciption factor 2 [Source:NCBI gene;Acc:771523]
81. SLC38A11 ENSGALG00000011052 386 0.965 - - - - - - - 0.965 - - solute carrier family 38 member 11 [Source:HGNC Symbol;Acc:HGNC:26836]
82. BPTF ENSGALG00000038222 7521 0.965 - - - - - - - 0.965 - - bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]
83. MSC ENSGALG00000037777 1109 0.964 - - - - - - - 0.964 - - musculin [Source:HGNC Symbol;Acc:HGNC:7321]
84. CCM2 ENSGALG00000005612 323 0.964 - - - - - - - 0.964 - - CCM2 scaffold protein [Source:NCBI gene;Acc:420410]
85. GOLGA1 ENSGALG00000001025 334 0.964 - - - - - - - 0.964 - - golgin A1 [Source:HGNC Symbol;Acc:HGNC:4424]
86. PIGG ENSGALG00000015349 314 0.963 - - - - - - - 0.963 - - phosphatidylinositol glycan anchor biosynthesis class G [Source:HGNC Symbol;Acc:HGNC:25985]
87. LONRF2 ENSGALG00000016768 193 0.963 - - - - - - - 0.963 - - LON peptidase N-terminal domain and ring finger 2 [Source:HGNC Symbol;Acc:HGNC:24788]
88. MSANTD1 ENSGALG00000015628 154 0.963 - - - - - - - 0.963 - - Myb/SANT DNA binding domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33741]
89. SIGMAR1 ENSGALG00000028996 12267 0.961 - - - - - - - 0.961 - - sigma non-opioid intracellular receptor 1 [Source:NCBI gene;Acc:100859748]
90. AFAP1L2 ENSGALG00000008999 1305 0.961 - - - - - - - 0.961 - - actin filament associated protein 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25901]
91. DOCK7 6385 0.961 - - - - - - - 0.961 - - dedicator of cytokinesis 7, transcript variant X3
92. FAM49B ENSGALG00000036490 7984 0.961 - - - - - - - 0.961 - - family with sequence similarity 49 member B [Source:HGNC Symbol;Acc:HGNC:25216]
93. TGS1 ENSGALG00000015340 5897 0.959 - - - - - - - 0.959 - - trimethylguanosine synthase 1 [Source:NCBI gene;Acc:421126]
94. UBR2 ENSGALG00000009906 7717 0.957 - - - - - - - 0.957 - - ubiquitin protein ligase E3 component n-recognin 2 [Source:HGNC Symbol;Acc:HGNC:21289]
95. RPN2 ENSGALG00000003815 18864 0.957 - - - - - - - 0.957 - - ribophorin II [Source:NCBI gene;Acc:419177]
96. HSD17B2 ENSGALG00000005467 275 0.957 - - - - - - - 0.957 - - hydroxysteroid 17-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5211]
97. FAM162A ENSGALG00000007378 8290 0.953 - - - - - - - 0.953 - - family with sequence similarity 162 member A [Source:HGNC Symbol;Acc:HGNC:17865]
98. DDX47 ENSGALG00000011794 4255 0.951 - - - - - - - 0.951 - - DEAD-box helicase 47 [Source:NCBI gene;Acc:417959]
99. MRPS36 ENSGALG00000014789 7584 0.948 - - - - - - - 0.948 - - mitochondrial ribosomal protein S36 [Source:HGNC Symbol;Acc:HGNC:16631]
100. CDC23 ENSGALG00000007610 11945 0.942 - - - - - - - 0.942 - - cell division cycle 23 [Source:HGNC Symbol;Acc:HGNC:1724]

There are 754 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA