Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PMP22

Gene Name Gene ID Reads Annotation
PMP22 ENSGALG00000031425 5358 peripheral myelin protein 22 [Source:NCBI gene;Acc:417327]











Genes with expression patterns similar to PMP22

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PMP22 ENSGALG00000031425 5358 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 peripheral myelin protein 22 [Source:NCBI gene;Acc:417327]
2. MAP2K2 ENSGALG00000001267 3857 1.713 - - - - - - 0.720 0.993 - - mitogen-activated protein kinase kinase 2 [Source:NCBI gene;Acc:396349]
3. SHH ENSGALG00000006379 1943 1.576 - - - - - - - - 0.803 0.773 sonic hedgehog [Source:NCBI gene;Acc:395615]
4. LIMCH1 ENSGALG00000014258 1987 1.551 - - 0.740 - - - - - 0.811 - LIM and calponin homology domains 1 [Source:HGNC Symbol;Acc:HGNC:29191]
5. EMILIN3 ENSGALG00000030012 6200 1.512 - - 0.803 - - - - - 0.709 - elastin microfibril interfacer 3 [Source:HGNC Symbol;Acc:HGNC:16123]
6. WWP2 ENSGALG00000000699 5040 1.485 - - 0.736 - - - - - 0.749 - WW domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:415868]
7. SOX9 ENSGALG00000004386 14802 1.455 - - 0.731 - - - - - 0.724 - SRY (sex determining region Y)-box 9 [Source:NCBI gene;Acc:374148]
8. PAX1 ENSGALG00000039040 3339 1.441 - - 0.736 - - - - - 0.705 - paired box 1 [Source:HGNC Symbol;Acc:HGNC:8615]
9. RFT1 ENSGALG00000001945 2446 0.998 - - - - - - - 0.998 - - RFT1 homolog [Source:NCBI gene;Acc:770487]
10. FBF1 ENSGALG00000002179 1738 0.997 - - - - - - - 0.997 - - Fas binding factor 1 [Source:NCBI gene;Acc:770159]
11. TMEM192 ENSGALG00000009528 2428 0.997 - - - - - - - 0.997 - - transmembrane protein 192 [Source:HGNC Symbol;Acc:HGNC:26775]
12. ZNF319 ENSGALG00000000999 1272 0.997 - - - - - - - 0.997 - - zinc finger protein 319 [Source:HGNC Symbol;Acc:HGNC:13644]
13. RAI2 ENSGALG00000016538 1074 0.997 - - - - - - - 0.997 - - retinoic acid induced 2 [Source:HGNC Symbol;Acc:HGNC:9835]
14. ELAVL4 ENSGALG00000010533 4978 0.997 - - - - - - - 0.997 - - ELAV like RNA binding protein 4 [Source:NCBI gene;Acc:395634]
15. NVL ENSGALG00000009322 5286 0.997 - - - - - - - 0.997 - - nuclear VCP-like [Source:NCBI gene;Acc:421326]
16. SLC35D1 ENSGALG00000011121 4456 0.997 - - - - - - - 0.997 - - solute carrier family 35 member D1 [Source:HGNC Symbol;Acc:HGNC:20800]
17. RNFT1 ENSGALG00000005205 2888 0.997 - - - - - - - 0.997 - - ring finger protein, transmembrane 1 [Source:HGNC Symbol;Acc:HGNC:30206]
18. SNIP1 ENSGALG00000002010 1429 0.997 - - - - - - - 0.997 - - Smad nuclear interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:30587]
19. CRELD2 ENSGALG00000008551 2084 0.997 - - - - - - - 0.997 - - cysteine rich with EGF like domains 2 [Source:NCBI gene;Acc:417735]
20. ATP2B4 ENSGALG00000003601 3746 0.997 - - - - - - - 0.997 - - ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
21. PIGL ENSGALG00000004492 669 0.997 - - - - - - - 0.997 - - phosphatidylinositol glycan anchor biosynthesis class L, transcript variant X4
22. RNF168 ENSGALG00000006392 507 0.997 - - - - - - - 0.997 - - ring finger protein 168 [Source:HGNC Symbol;Acc:HGNC:26661]
23. ENSGALG00000012250 ENSGALG00000012250 581 0.997 - - - - - - - 0.997 - -
24. ATE1 ENSGALG00000009502 3751 0.996 - - - - - - - 0.996 - - arginyltransferase 1 [Source:NCBI gene;Acc:423936]
25. SPDYA ENSGALG00000017392 503 0.996 - - - - - - - 0.996 - - speedy/RINGO cell cycle regulator family member A [Source:HGNC Symbol;Acc:HGNC:30613]
26. CENPL ENSGALG00000038411 4867 0.996 - - - - - - - 0.996 - - centromere protein L [Source:NCBI gene;Acc:426563]
27. PDCD6IP ENSGALG00000033500 580 0.996 - - - - - - - 0.996 - - programmed cell death 6 interacting protein [Source:NCBI gene;Acc:420725]
28. C6ORF192 C6ORF192 4224 0.996 - - - - - - - 0.996 - -
29. FUNDC2 ENSGALG00000029585 9334 0.995 - - - - - - - 0.995 - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
30. DLC1 ENSGALG00000013715 5297 0.995 - - - - - - - 0.995 - - DLC1 Rho GTPase activating protein [Source:HGNC Symbol;Acc:HGNC:2897]
31. ALS2 ENSGALG00000008415 2576 0.995 - - - - - - - 0.995 - - ALS2, alsin Rho guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:443]
32. TMEM126A ENSGALG00000014066 6149 0.994 - - - - - - - 0.994 - - transmembrane protein 126A [Source:HGNC Symbol;Acc:HGNC:25382]
33. NBL1 ENSGALG00000040297 8165 0.994 - - - - - - - 0.994 - - neuroblastoma 1, DAN family BMP antagonist [Source:NCBI gene;Acc:373952]
34. RCOR3 ENSGALG00000009871 7022 0.994 - - - - - - - 0.994 - - REST corepressor 3 [Source:NCBI gene;Acc:421380]
35. CDCA7 ENSGALG00000040833 7484 0.993 - - - - - - - 0.993 - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
36. CETN1 ENSGALG00000026741 7243 0.993 - - - - - - - 0.993 - - centrin 1 [Source:NCBI gene;Acc:422668]
37. CRNKL1 ENSGALG00000008429 7280 0.992 - - - - - - - 0.992 - - crooked neck pre-mRNA splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:15762]
38. TTL ENSGALG00000008614 3991 0.991 - - - - - - - 0.991 - - tubulin tyrosine ligase [Source:NCBI gene;Acc:416711]
39. PPP3R1 ENSGALG00000023648 3417 0.99 - - - - - - - 0.990 - - protein phosphatase 3 regulatory subunit B, alpha [Source:NCBI gene;Acc:378804]
40. IFNAR2 ENSGALG00000041867 1596 0.99 - - - - - - - 0.990 - - interferon alpha and beta receptor subunit 2 [Source:NCBI gene;Acc:395664]
41. YAF2 ENSGALG00000009540 8452 0.99 - - - - - - - 0.990 - - YY1 associated factor 2 [Source:NCBI gene;Acc:417790]
42. PPM1D ENSGALG00000035610 6530 0.99 - - - - - - - 0.990 - - protein phosphatase, Mg2+/Mn2+ dependent 1D [Source:HGNC Symbol;Acc:HGNC:9277]
43. RBM7 ENSGALG00000007017 8779 0.989 - - - - - - - 0.989 - - RNA binding motif protein 7 [Source:NCBI gene;Acc:419760]
44. PDHB ENSGALG00000029576 12254 0.988 - - - - - - - 0.988 - - pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]
45. G3BP2 ENSGALG00000010882 21129 0.988 - - - - - - - 0.988 - - G3BP stress granule assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:30291]
46. gga-mir-6587 ENSGALG00000026386 9441 0.984 - - - - - - - 0.984 - - gga-mir-6587 [Source:miRBase;Acc:MI0022407]
47. EXO1 ENSGALG00000010748 7572 0.981 - - - - - - - 0.981 - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
48. JSC JSC 7982 0.972 - - - - - - - 0.972 - -
49. COX7A2L ENSGALG00000037996 13646 0.97 - - - - - - - 0.970 - - cytochrome c oxidase subunit 7A2 like [Source:NCBI gene;Acc:421392]
50. KIAA0196 KIAA0196 4011 0.97 - - - - - - - 0.970 - -
51. RFC3 ENSGALG00000017064 7011 0.97 - - - - - - - 0.970 - - replication factor C subunit 3 [Source:NCBI gene;Acc:418907]
52. AP2B1 ENSGALG00000042125 13229 0.967 - - - - - - - 0.967 - - adaptor related protein complex 2 subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:563]
53. XPO5 ENSGALG00000010341 24765 0.965 - - - - - - - 0.965 - - exportin 5 [Source:NCBI gene;Acc:421450]
54. GARS ENSGALG00000005694 18264 0.964 - - - - - - - 0.964 - - glycyl-tRNA synthetase [Source:NCBI gene;Acc:428403]
55. INPP5A ENSGALG00000010493 6769 0.961 - - - - - - - 0.961 - - inositol polyphosphate-5-phosphatase A [Source:HGNC Symbol;Acc:HGNC:6076]
56. NUP107 ENSGALG00000009934 2097 0.96 - - - - - - - 0.960 - - nucleoporin 107 [Source:NCBI gene;Acc:101751988]
57. SBNO1 ENSGALG00000003392 6731 0.959 - - - - - - - 0.959 - - strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
58. TPD52 ENSGALG00000040167 9891 0.958 - - - - - - - 0.958 - - tumor protein D52 [Source:NCBI gene;Acc:770339]
59. SFT2D1 ENSGALG00000020005 10855 0.957 - - - - - - - 0.957 - - SFT2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21102]
60. ANKRD11 ENSGALG00000006222 12327 0.955 - - - - - - - 0.955 - - ankyrin repeat domain 11, transcript variant X2
61. XRCC5 ENSGALG00000011492 6802 0.941 - - - - - - - 0.941 - - X-ray repair cross complementing 5 [Source:HGNC Symbol;Acc:HGNC:12833]
62. PRTG ENSGALG00000037336 34665 0.933 - - - - - - - 0.933 - - protogenin [Source:NCBI gene;Acc:415407]
63. MRPL54 ENSGALG00000027611 39450 0.931 - - - - - - - 0.931 - - mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]
64. PPA2 ENSGALG00000010582 22301 0.922 - - - - - - - 0.922 - - pyrophosphatase (inorganic) 2 [Source:HGNC Symbol;Acc:HGNC:28883]
65. Sep-02_1 Sep-02_1 19203 0.915 - - - - - - - 0.915 - -
66. CHD4 ENSGALG00000013565 25695 0.914 - - - - - - - 0.914 - - chromodomain helicase DNA binding protein 4
67. ENSGALG00000017396 ENSGALG00000017396 9028 0.907 - - - - - - - 0.907 - -
68. SLC25A39 ENSGALG00000042894 10654 0.902 - - - - - - - 0.902 - - solute carrier family 25 member 39 [Source:HGNC Symbol;Acc:HGNC:24279]
69. TNFAIP8L1 ENSGALG00000004266 12611 0.9 - - - - - - - 0.900 - - TNF alpha induced protein 8 like 1 [Source:NCBI gene;Acc:420162]
70. FAM98A ENSGALG00000010428 9585 0.9 - - - - - - - 0.900 - - family with sequence similarity 98 member A [Source:NCBI gene;Acc:421458]
71. CDC42EP4 ENSGALG00000023364 9240 0.9 - - - - - - - 0.900 - - CDC42 effector protein 4 [Source:HGNC Symbol;Acc:HGNC:17147]
72. ZOV3 ZOV3 3267 0.897 - - - - - - - 0.897 - -
73. LRPPRC ENSGALG00000009967 17091 0.88 - - - - - - - 0.880 - - leucine rich pentatricopeptide repeat containing [Source:HGNC Symbol;Acc:HGNC:15714]
74. ENSGALG00000023609 ENSGALG00000023609 6933 0.867 - - - - - - - 0.867 - -
75. ATP6V1G1 ENSGALG00000007190 82534 0.85 - - - - - - - 0.850 - - ATPase H+ transporting V1 subunit G1 [Source:NCBI gene;Acc:417249]
76. GTF2H5 ENSGALG00000013733 12293 0.835 - - - - - - - 0.835 - - general transcription factor IIH subunit 5 [Source:NCBI gene;Acc:769754]
77. C1QTNF3 ENSGALG00000027887 8646 0.823 - - 0.823 - - - - - - - C1q and tumor necrosis factor related protein 3, transcript variant X1
78. MAPK6 ENSGALG00000031448 28384 0.82 - - - - - - - 0.820 - - mitogen-activated protein kinase 6 [Source:NCBI gene;Acc:415419]
79. SURF1 ENSGALG00000033754 2130 0.818 - - - - - - 0.818 - - - SURF1, cytochrome c oxidase assembly factor [Source:NCBI gene;Acc:417157]
80. SMOC1 ENSGALG00000009415 2403 0.814 - - 0.814 - - - - - - - SPARC related modular calcium binding 1 [Source:HGNC Symbol;Acc:HGNC:20318]
81. SLC25A36 ENSGALG00000005283 4221 0.812 - - - - - - 0.812 - - - solute carrier family 25 member 36 [Source:NCBI gene;Acc:424817]
82. ACBD7 ENSGALG00000019663 2328 0.811 - - 0.811 - - - - - - - acyl-CoA binding domain containing 7 [Source:HGNC Symbol;Acc:HGNC:17715]
83. SPON1 ENSGALG00000038775 16503 0.803 - - 0.803 - - - - - - - spondin 1 [Source:NCBI gene;Acc:395657]
84. CRIP1 ENSGALG00000002771 4270 0.8 - - 0.800 - - - - - - - cysteine rich protein 1 [Source:NCBI gene;Acc:101747696]
85. RAB33B ENSGALG00000009790 2340 0.8 - - - - - - 0.800 - - - RAB33B, member RAS oncogene family [Source:NCBI gene;Acc:422441]
86. LECT1 LECT1 12694 0.793 - - - - - - - - 0.793 -
87. CLPX ENSGALG00000007289 6348 0.792 - - - - - - 0.792 - - - caseinolytic mitochondrial matrix peptidase chaperone subunit [Source:NCBI gene;Acc:415527]
88. USP15 ENSGALG00000030024 2761 0.788 - - - - - - 0.788 - - - ubiquitin specific peptidase 15 [Source:NCBI gene;Acc:395644]
89. TMEM43 ENSGALG00000006345 2284 0.784 - - - - - - 0.784 - - - transmembrane protein 43
90. TBC1D1 ENSGALG00000039380 4423 0.777 - - - - - - 0.777 - - - TBC1 domain family member 1 [Source:NCBI gene;Acc:426162]
91. BTG2 ENSGALG00000026858 6716 0.776 - - - - - - 0.776 - - - BTG anti-proliferation factor 2 [Source:HGNC Symbol;Acc:HGNC:1131]
92. ABHD17A ENSGALG00000041163 5578 0.774 - - - - - - - 0.774 - - abhydrolase domain containing 17A [Source:HGNC Symbol;Acc:HGNC:28756]
93. MRPS6 ENSGALG00000027579 8225 0.771 - - - - - - - 0.771 - - mitochondrial ribosomal protein S6 [Source:NCBI gene;Acc:427978]
94. MYH1D ENSGALG00000027323 365 0.769 - - 0.769 - - - - - - - Gallus gallus myosin, heavy chain 1D, skeletal muscle (MYH1D), mRNA. [Source:RefSeq mRNA;Acc:NM_001319304]
95. SAMD3 ENSGALG00000032409 459 0.768 - - - - - - - - - 0.768 sterile alpha motif domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21574]
96. TST ENSGALG00000012488 5314 0.767 - - - - - - 0.767 - - - thiosulfate sulfurtransferase [Source:NCBI gene;Acc:418049]
97. ACTA1 ENSGALG00000011086 2543 0.767 - - 0.767 - - - - - - - actin, alpha 1, skeletal muscle [Source:NCBI gene;Acc:421534]
98. gga-mir-7474 ENSGALG00000033766 5727 0.765 - - 0.765 - - - - - - - gga-mir-7474 [Source:miRBase;Acc:MI0024147]
99. PPIE ENSGALG00000013383 3923 0.765 - - - - - - 0.765 - - - peptidylprolyl isomerase E [Source:HGNC Symbol;Acc:HGNC:9258]
100. FCF1 ENSGALG00000010275 24928 0.765 - - - - - - - 0.765 - - FCF1, rRNA-processing protein [Source:HGNC Symbol;Acc:HGNC:20220]

There are 108 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA