Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for PMF1

Gene Name Gene ID Reads Annotation
PMF1 PMF1 1172










Genes with expression patterns similar to PMF1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. PMF1 PMF1 1172 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. zcchc14 ENSDARG00000101242 630 1.575 - - - - - 0.778 - 0.797 - zinc finger, CCHC domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-060503-319]
3. glcci1 496 1.556 - 0.730 - - - 0.826 - - - glucocorticoid induced 1
4. ripk4 ENSDARG00000043211 775 1.531 0.753 0.778 - - - - - - - receptor-interacting serine-threonine kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2042]
5. fbxo10 ENSDARG00000061936, ENSDARG00000116317 1015 1.529 - 0.703 - - - 0.826 - - - F-box protein 10 [Source:ZFIN;Acc:ZDB-GENE-090313-270]
6. RPS6KC1 ENSDARG00000104103 746 1.524 - 0.802 - - - 0.722 - - - ribosomal protein S6 kinase polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-081031-83]
7. gmnn ENSDARG00000035957, ENSDARG00000113743 682 1.52 - 0.795 - 0.725 - - - - - geminin, DNA replication inhibitor [Source:ZFIN;Acc:ZDB-GENE-030429-30]
8. dusp11 ENSDARG00000038156 2490 1.507 - - - - - 0.705 0.802 - - dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) [Source:ZFIN;Acc:ZDB-GENE-050417-226]
9. sorbs3 ENSDARG00000037476 511 1.505 - - - - - 0.779 0.726 - - sorbin and SH3 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-1]
10. rnf146 ENSDARG00000089981 715 1.501 - 0.757 - - - - 0.744 - - ring finger protein 146 [Source:ZFIN;Acc:ZDB-GENE-030131-5997]
11. dnal4a ENSDARG00000031116, ENSDARG00000117095 411 1.489 - - - 0.708 - 0.781 - - - dynein, axonemal, light chain 4a [Source:ZFIN;Acc:ZDB-GENE-040801-122]
12. PRIMPOL ENSDARG00000033273, ENSDARG00000111555 918 1.483 - - - - - - 0.723 0.760 - primase and polymerase (DNA-directed) [Source:ZFIN;Acc:ZDB-GENE-051113-100]
13. nsl1 ENSDARG00000024471 1269 1.473 - 0.731 0.742 - - - - - - NSL1, MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-041014-362]
14. cln6a ENSDARG00000077584 1090 1.473 - 0.709 - - - - 0.764 - - CLN6, transmembrane ER protein a [Source:ZFIN;Acc:ZDB-GENE-041010-57]
15. uhmk1 ENSDARG00000059575 1486 1.47 0.737 0.733 - - - - - - - U2AF homology motif (UHM) kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1014]
16. arfgap3 ENSDARG00000097583 1087 1.446 - - - - - 0.728 - 0.718 - ADP-ribosylation factor GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1]
17. wu:fc26g07 wu:fc26g07 1165 1.443 - 0.741 - - - - 0.702 - -
18. st3gal2l st3gal2l 393 1.442 - - - - - 0.738 0.704 - -
19. selo 879 0.888 - - - - - - - 0.888 - selenoprotein O
20. clptm1 ENSDARG00000018973, ENSDARG00000109534, ENSDARG00000114443 2439 0.886 - - - - - - 0.886 - - cleft lip and palate associated transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040801-265]
21. prkab1a ENSDARG00000044183 264 0.872 - - - - - 0.872 - - - protein kinase, AMP-activated, beta 1 non-catalytic subunit, a [Source:ZFIN;Acc:ZDB-GENE-040718-377]
22. CR407594.2 CR407594.2 145 0.869 - - - - - 0.869 - - -
23. mysm1 ENSDARG00000034693 291 0.866 - - - - - 0.866 - - - Myb-like, SWIRM and MPN domains 1 [Source:ZFIN;Acc:ZDB-GENE-041014-28]
24. wdr46_1 ENSDARG00000095879 1291 0.862 - - - 0.862 - - - - - WD repeat domain 46 [Source:ZFIN;Acc:ZDB-GENE-040426-1264]
25. sema5a ENSDARG00000058821 333 0.862 - - - - - 0.862 - - - sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8969]
26. lysmd3 ENSDARG00000024693 754 0.854 - - - - - - - 0.854 - LysM, putative peptidoglycan-binding, domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040625-88]
27. TMEM45A ENSDARG00000070743 1669 0.853 - 0.853 - - - - - - - transmembrane protein 45a [Source:ZFIN;Acc:ZDB-GENE-050522-34]
28. rem2 ENSDARG00000074064, ENSDARG00000109687 219 0.85 - - - - - 0.850 - - - RAS (RAD and GEM)-like GTP binding 2 [Source:ZFIN;Acc:ZDB-GENE-081110-1]
29. kcnd3 ENSDARG00000056101 324 0.849 - - - - - - 0.849 - - potassium voltage-gated channel, Shal-related subfamily, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5626]
30. CCDC34 CCDC34 313 0.849 - 0.849 - - - - - - -
31. NOTUM NOTUM 232 0.848 - - - - - 0.848 - - -
32. CABZ01087568.1 CABZ01087568.1 1487 0.841 - 0.841 - - - - - - -
33. mgrn1a ENSDARG00000100072 263 0.84 - 0.840 - - - - - - - mahogunin, ring finger 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6192]
34. HEG1 ENSDARG00000018441 117 0.84 - - - - - 0.840 - - - heart development protein with EGF-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-040714-1]
35. CR628365.1 ENSDARG00000097736 29 0.839 - - - - - 0.839 - - -
36. atp6v1f ENSDARG00000045543 3445 0.838 - - - - - - 0.838 - - ATPase H+ transporting V1 subunit F [Source:ZFIN;Acc:ZDB-GENE-040718-259]
37. zgc:174315 ENSDARG00000079222 180 0.834 - - - - - 0.834 - - - zgc:174315 [Source:ZFIN;Acc:ZDB-GENE-080219-29]
38. si:ch211-232m8.3 ENSDARG00000095092 161 0.833 - - - - - 0.833 - - - si:ch211-232m8.3 [Source:ZFIN;Acc:ZDB-GENE-081107-22]
39. chordc1 chordc1 548 0.833 - - - - - 0.833 - - -
40. Sep-10 Sep-10 440 0.831 - - - - - 0.831 - - -
41. DRD5 DRD5 142 0.83 - - - - - 0.830 - - -
42. adprm ENSDARG00000026090 91 0.828 - - - - - 0.828 - - - ADP-ribose/CDP-alcohol diphosphatase, manganese-dependent [Source:ZFIN;Acc:ZDB-GENE-040426-1406]
43. TAF4 TAF4 658 0.826 - - - - - 0.826 - - -
44. si:dkeyp-110e4.6 ENSDARG00000061845 1755 0.825 - - - - - - 0.825 - - si:dkeyp-110e4.6 [Source:ZFIN;Acc:ZDB-GENE-030219-75]
45. aqp1a.1 ENSDARG00000023713 3237 0.825 - - - - - 0.825 - - - aquaporin 1a (Colton blood group), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7764]
46. si:ch211-110p13.3 si:ch211-110p13.3 197 0.825 - - - - - - - 0.825 -
47. ercc6 ENSDARG00000075612 1175 0.825 - - - - - - 0.825 - - excision repair cross-complementation group 6 [Source:ZFIN;Acc:ZDB-GENE-070228-1]
48. MAD2L1BP ENSDARG00000104943 351 0.822 - - - - - - - 0.822 - MAD2L1 binding protein [Source:ZFIN;Acc:ZDB-GENE-161230-19]
49. si:ch211-244b2.3 ENSDARG00000069244 19 0.822 - - - - - 0.822 - - - si:ch211-244b2.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4737]
50. si:ch211-126i22.5 ENSDARG00000060911 209 0.821 - - - - - 0.821 - - - si:ch211-126i22.5 [Source:ZFIN;Acc:ZDB-GENE-091204-183]
51. fbxo7 ENSDARG00000099833 304 0.82 - 0.820 - - - - - - - F-box protein 7 [Source:ZFIN;Acc:ZDB-GENE-050913-68]
52. EIF1B ENSDARG00000029445 5034 0.816 - - - - - 0.816 - - - eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
53. pctp ENSDARG00000073985 405 0.815 0.815 - - - - - - - - phosphatidylcholine transfer protein [Source:ZFIN;Acc:ZDB-GENE-081022-182]
54. PREB ENSDARG00000101602 626 0.814 - - - - - 0.814 - - - prolactin regulatory element binding [Source:ZFIN;Acc:ZDB-GENE-040718-385]
55. vps53 ENSDARG00000069324, ENSDARG00000116674 1130 0.814 - - - - - - 0.814 - - vacuolar protein sorting 53 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-199]
56. zmpste24 ENSDARG00000044090, ENSDARG00000115387 3873 0.813 - - - - - - 0.813 - - zinc metallopeptidase, STE24 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-6312]
57. fam26e fam26e 211 0.811 - - - - - 0.811 - - -
58. ZDHHC21 ENSDARG00000110709 295 0.81 - - - - - - - 0.810 - zinc finger, DHHC-type containing 21 [Source:ZFIN;Acc:ZDB-GENE-080401-2]
59. lhx2b ENSDARG00000031222 517 0.81 - - - - - 0.810 - - - LIM homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-051220-1]
60. stard3 ENSDARG00000017809 727 0.81 - - - - - - 0.810 - - StAR-related lipid transfer (START) domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-001120-2]
61. stam2 ENSDARG00000005318 2980 0.809 - - - - - 0.809 - - - signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 [Source:ZFIN;Acc:ZDB-GENE-041114-64]
62. ccdc6a ENSDARG00000043334, ENSDARG00000112924 1774 0.808 - 0.808 - - - - - - - coiled-coil domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-7848]
63. rgs7 rgs7 208 0.807 - - - - - - 0.807 - -
64. rdh10b ENSDARG00000012369 980 0.806 - - - - - 0.806 - - - retinol dehydrogenase 10b [Source:ZFIN;Acc:ZDB-GENE-030909-7]
65. vps4b ENSDARG00000069175 1922 0.806 - - - - - 0.806 - - - vacuolar protein sorting 4b homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1235]
66. vrk1 ENSDARG00000018006 1759 0.806 - - - - - - 0.806 - - vaccinia related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2709]
67. manea ENSDARG00000001898 450 0.805 - - - - - 0.805 - - - mannosidase, endo-alpha [Source:ZFIN;Acc:ZDB-GENE-040912-87]
68. dsel dsel 96 0.805 - - - - - 0.805 - - -
69. LRG1 LRG1 304 0.804 - - - - - 0.804 - - -
70. tbc1d10a tbc1d10a 462 0.804 - - - - - 0.804 - - -
71. efhd1 ENSDARG00000043446 703 0.803 - - - - - 0.803 - - - EF-hand domain family, member D1 [Source:ZFIN;Acc:ZDB-GENE-030131-7461]
72. magi2 magi2 301 0.802 - - - - - 0.802 - - -
73. FBXO46 ENSDARG00000099814 722 0.802 - - - - - 0.802 - - - F-box protein 46 [Source:HGNC Symbol;Acc:HGNC:25069]
74. naa35 ENSDARG00000012378 3442 0.801 - 0.801 - - - - - - - N(alpha)-acetyltransferase 35, NatC auxiliary subunit [Source:ZFIN;Acc:ZDB-GENE-030131-306]
75. bora ENSDARG00000042688, ENSDARG00000112916 402 0.8 - - - - - - - 0.800 - bora, aurora kinase A activator [Source:ZFIN;Acc:ZDB-GENE-041114-165]
76. tctex1d1 ENSDARG00000103545 409 0.8 - - - 0.800 - - - - - Tctex1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-49]
77. stat5.2 stat5.2 1187 0.8 - - - - - - 0.800 - -
78. ncaph ENSDARG00000061468, ENSDARG00000113773 1401 0.799 - - - - - - 0.799 - - non-SMC condensin I complex, subunit H [Source:ZFIN;Acc:ZDB-GENE-070112-652]
79. tspan14 ENSDARG00000055938, ENSDARG00000117111 4518 0.799 - 0.799 - - - - - - - tetraspanin 14 [Source:ZFIN;Acc:ZDB-GENE-060825-329]
80. si:ch211-236p5.3 ENSDARG00000086418 138 0.797 - - - - - 0.797 - - - si:ch211-236p5.3 [Source:ZFIN;Acc:ZDB-GENE-081028-31]
81. kctd6a ENSDARG00000043095 480 0.796 - - - 0.796 - - - - - potassium channel tetramerization domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-050208-474]
82. acadl ENSDARG00000088357, ENSDARG00000115321 1179 0.796 - 0.796 - - - - - - - acyl-CoA dehydrogenase long chain [Source:ZFIN;Acc:ZDB-GENE-040426-771]
83. kdm2bb ENSDARG00000046010 747 0.795 - - - - - 0.795 - - - lysine (K)-specific demethylase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080225-13]
84. sox12 ENSDARG00000025847 681 0.792 - - - - - 0.792 - - - SRY (sex determining region Y)-box 12 [Source:ZFIN;Acc:ZDB-GENE-040724-33]
85. hoxc10a ENSDARG00000070348 2323 0.791 - - - - - 0.791 - - - homeobox C10a [Source:ZFIN;Acc:ZDB-GENE-990415-110]
86. Sep-10_1 Sep-10_1 424 0.791 - - - - - 0.791 - - -
87. top2b ENSDARG00000034195 3715 0.791 0.791 - - - - - - - - DNA topoisomerase II beta [Source:ZFIN;Acc:ZDB-GENE-041008-136]
88. CU929089.1 CU929089.1 479 0.791 - - - - - 0.791 - - -
89. crabp2a ENSDARG00000073978 868 0.79 - - - - - - - 0.790 - cellular retinoic acid binding protein 2, a [Source:ZFIN;Acc:ZDB-GENE-020320-4]
90. gpx8 ENSDARG00000013302 1427 0.79 - - - - - - 0.790 - - glutathione peroxidase 8 (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-965]
91. CR361541.1 CR361541.1 688 0.79 - - - - - 0.790 - - -
92. znf319 znf319 3027 0.79 - - - - - - 0.790 - -
93. blzf1 ENSDARG00000011299 2568 0.79 - 0.790 - - - - - - - basic leucine zipper nuclear factor 1 [Source:ZFIN;Acc:ZDB-GENE-010724-1]
94. FAM35A FAM35A 1091 0.789 - - - - - - - 0.789 -
95. tuba1b ENSDARG00000045367 8485 0.789 - 0.789 - - - - - - - tubulin, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030822-1]
96. ndc80 ENSDARG00000071694 1162 0.788 - 0.788 - - - - - - - NDC80 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-030131-904]
97. NEDD4 NEDD4 2040 0.788 - 0.788 - - - - - - -
98. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 0.787 - - - - - - - 0.787 - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
99. CR931813.1 ENSDARG00000103293 84 0.787 - - - - - 0.787 - - -
100. ZBTB39 ENSDARG00000019265 687 0.787 - - - 0.787 - - - - - zinc finger and BTB domain containing 39 [Source:ZFIN;Acc:ZDB-GENE-130822-1]

There are 547 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA