Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PKP4

Gene Name Gene ID Reads Annotation
PKP4 ENSGALG00000012561 3087 plakophilin 4 [Source:NCBI gene;Acc:424328]











Genes with expression patterns similar to PKP4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PKP4 ENSGALG00000012561 3087 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 plakophilin 4 [Source:NCBI gene;Acc:424328]
2. AMMECR1L ENSGALG00000026728 2134 1.927 - - 0.938 - - - - 0.989 - - AMMECR1 like [Source:HGNC Symbol;Acc:HGNC:28658]
3. CCDC61 ENSGALG00000006714 8066 1.792 - - 0.836 - - - - 0.956 - - coiled-coil domain containing 61 [Source:NCBI gene;Acc:424880]
4. CDC42BPA ENSGALG00000009158 3926 1.765 - - 0.902 - - - - 0.863 - - CDC42 binding protein kinase alpha [Source:NCBI gene;Acc:416746]
5. ARFRP1 ENSGALG00000006101 3743 1.749 - - 0.784 - - - - 0.965 - - ADP ribosylation factor related protein 1 [Source:HGNC Symbol;Acc:HGNC:662]
6. ZNF395 ENSGALG00000034140 1868 1.626 - - 0.889 - - - 0.737 - - - zinc finger protein 395 [Source:HGNC Symbol;Acc:HGNC:18737]
7. WDR60 1631 1.619 - - 0.880 - - - - 0.739 - - WD repeat domain 60, transcript variant X4
8. MAP2 ENSGALG00000002789 6597 1.482 - - 0.774 - - - 0.708 - - - microtubule associated protein 2, transcript variant X33
9. MAP1B ENSGALG00000014999 6288 1.443 0.737 - 0.706 - - - - - - - microtubule associated protein 1B
10. ANKRD11 ENSGALG00000006222 12327 1.429 0.711 - 0.718 - - - - - - - ankyrin repeat domain 11, transcript variant X2
11. ADIPOR1 ENSGALG00000000094 1862 0.993 - - - - - - - 0.993 - - adiponectin receptor 1 [Source:NCBI gene;Acc:421148]
12. C5orf24 ENSGALG00000006371 1573 0.992 - - - - - - - 0.992 - - chromosome 5 open reading frame 24 [Source:HGNC Symbol;Acc:HGNC:26746]
13. GTDC1 ENSGALG00000012424 1446 0.992 - - - - - - - 0.992 - - glycosyltransferase like domain containing 1 [Source:NCBI gene;Acc:424304]
14. C7orf25 ENSGALG00000040161 694 0.992 - - - - - - - 0.992 - - chromosome 7 open reading frame 25 [Source:HGNC Symbol;Acc:HGNC:21703]
15. ITGA9 ENSGALG00000029378 415 0.991 - - - - - - - 0.991 - - integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
16. INOS INOS 313 0.991 - - - - - - - 0.991 - -
17. PHLPP1 ENSGALG00000012888 398 0.991 - - - - - - - 0.991 - - PH domain and leucine rich repeat protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:20610]
18. HDGFL2 ENSGALG00000027068 1300 0.991 - - - - - - - 0.991 - - HDGF like 2 [Source:NCBI gene;Acc:772302]
19. FIGN ENSGALG00000011069 311 0.991 - - - - - - - 0.991 - - fidgetin, microtubule severing factor [Source:HGNC Symbol;Acc:HGNC:13285]
20. ATP8B4 ENSGALG00000002326 456 0.991 - - - - - - - 0.991 - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
21. RGS9 ENSGALG00000029610 112 0.991 - - - - - - - 0.991 - - regulator of G protein signaling 9 [Source:HGNC Symbol;Acc:HGNC:10004]
22. NEMF ENSGALG00000012263 2250 0.991 - - - - - - - 0.991 - - nuclear export mediator factor [Source:NCBI gene;Acc:428926]
23. RP9 ENSGALG00000035453 1186 0.991 - - - - - - - 0.991 - - retinitis pigmentosa 9 (autosomal dominant)
24. ABCA3 ENSGALG00000037837 1606 0.991 - - - - - - - 0.991 - - ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]
25. RGS17 ENSGALG00000026034 707 0.99 - - - - - - - 0.990 - - regulator of G protein signaling 17 [Source:NCBI gene;Acc:395645]
26. MYH15 ENSGALG00000015358 6304 0.99 - - - - - - - 0.990 - - myosin, heavy chain 15 [Source:NCBI gene;Acc:395534]
27. ARRDC4 ENSGALG00000007012 1039 0.99 - - - - - - - 0.990 - - arrestin domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28087]
28. TFEB ENSGALG00000039878 881 0.99 - - - - - - - 0.990 - - transcription factor EB [Source:NCBI gene;Acc:419922]
29. H3-I H3-I 1498 0.99 - - - - - - - 0.990 - -
30. REXO1 ENSGALG00000001043 3179 0.99 - - - - - - - 0.990 - - RNA exonuclease 1 homolog [Source:HGNC Symbol;Acc:HGNC:24616]
31. TRPC6 ENSGALG00000029416 281 0.99 - - - - - - - 0.990 - - transient receptor potential cation channel subfamily C member 6 [Source:HGNC Symbol;Acc:HGNC:12338]
32. APOOL ENSGALG00000006978 1953 0.989 - - - - - - - 0.989 - - apolipoprotein O like [Source:NCBI gene;Acc:422271]
33. IRX1 ENSGALG00000030991 1474 0.989 - - - - - - - 0.989 - - iroquois homeobox 1 [Source:NCBI gene;Acc:374185]
34. ENSGALG00000023180 ENSGALG00000023180 83 0.989 - - 0.989 - - - - - - -
35. SMARCC1 ENSGALG00000032642 4842 0.989 - - - - - - - 0.989 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 [Source:HGNC Symbol;Acc:HGNC:11104]
36. FGF18 ENSGALG00000002203 551 0.988 - - - - - - - 0.988 - - fibroblast growth factor 18 [Source:NCBI gene;Acc:395453]
37. RHOC ENSGALG00000001569 53 0.988 - - 0.988 - - - - - - - ras homolog family member C [Source:NCBI gene;Acc:395869]
38. KIAA0195 KIAA0195 48 0.988 - - 0.988 - - - - - - -
39. ADAMTS2 ENSGALG00000032974 141 0.988 - - 0.988 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 2 [Source:HGNC Symbol;Acc:HGNC:218]
40. POMC ENSGALG00000016600 99 0.988 - - 0.988 - - - - - - - proopiomelanocortin [Source:NCBI gene;Acc:422011]
41. GRIK3 ENSGALG00000002098 111 0.988 - - 0.988 - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
42. ALG9 ENSGALG00000021174 745 0.988 - - - - - - - 0.988 - - ALG9, alpha-1,2-mannosyltransferase, transcript variant X5
43. PLEKHG5 ENSGALG00000027476 42 0.988 - - 0.988 - - - - - - - pleckstrin homology and RhoGEF domain containing G5 [Source:HGNC Symbol;Acc:HGNC:29105]
44. PNISR ENSGALG00000015483 7711 0.988 - - - - - - - 0.988 - - PNN interacting serine and arginine rich protein [Source:NCBI gene;Acc:421796]
45. MGMT ENSGALG00000042949 53 0.988 - - 0.988 - - - - - - - O-6-methylguanine-DNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:7059]
46. DCTN5 ENSGALG00000006088 3113 0.987 - - - - - - - 0.987 - - dynactin subunit 5 [Source:NCBI gene;Acc:416574]
47. gga-mir-1772 ENSGALG00000025300 2892 0.987 - - - - - - - 0.987 - - gga-mir-1772 [Source:miRBase;Acc:MI0007515]
48. CC2D2A ENSGALG00000014514 1180 0.987 - - - - - - - 0.987 - - coiled-coil and C2 domain containing 2A [Source:HGNC Symbol;Acc:HGNC:29253]
49. MTMR9 ENSGALG00000016649 2055 0.987 - - - - - - - 0.987 - - myotubularin related protein 9 [Source:NCBI gene;Acc:422033]
50. REV3L ENSGALG00000015033 1917 0.986 - - - - - - - 0.986 - - REV3 like, DNA directed polymerase zeta catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9968]
51. TMEM57 ENSGALG00000001067 3367 0.986 - - - - - - - 0.986 - - transmembrane protein 57 [Source:NCBI gene;Acc:419590]
52. CARS2 ENSGALG00000016847 3814 0.986 - - - - - - - 0.986 - - cysteinyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25695]
53. BTG1L ENSGALG00000004676 2293 0.985 - - - - - - - 0.985 - - protein BTG1-like
54. DEPDC7 ENSGALG00000011681 1181 0.985 - - - - - - - 0.985 - - DEP domain containing 7 [Source:NCBI gene;Acc:421593]
55. NSRP1 ENSGALG00000004186 1683 0.985 - - - - - - - 0.985 - - nuclear speckle splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25305]
56. ZC3H3 ENSGALG00000043265 1638 0.984 - - - - - - - 0.984 - - zinc finger CCCH-type containing 3 [Source:NCBI gene;Acc:430349]
57. MT1 MT1 218 0.984 - - 0.984 - - - - - - -
58. TMEM59 ENSGALG00000010746 4669 0.983 - - - - - - - 0.983 - - transmembrane protein 59 [Source:NCBI gene;Acc:424656]
59. DNAJA1 ENSGALG00000023066 3820 0.983 - - - - - - - 0.983 - - DnaJ heat shock protein family (Hsp40) member A1 [Source:NCBI gene;Acc:427376]
60. TRMT44 ENSGALG00000015594 1490 0.983 - - - - - - - 0.983 - - tRNA methyltransferase 44 homolog [Source:HGNC Symbol;Acc:HGNC:26653]
61. CXorf30 CXorf30 172 0.982 - - 0.982 - - - - - - -
62. LGALS3 ENSGALG00000012173 3306 0.982 - - 0.982 - - - - - - - galectin 3 [Source:NCBI gene;Acc:373917]
63. NGEF ENSGALG00000036327 1048 0.982 - - - - - - - 0.982 - - neuronal guanine nucleotide exchange factor [Source:NCBI gene;Acc:424744]
64. GOLGA2 ENSGALG00000004881 677 0.982 - - 0.982 - - - - - - - golgin A2, transcript variant X7
65. METTL22 ENSGALG00000033603 696 0.982 - - - - - - - 0.982 - - methyltransferase like 22 [Source:NCBI gene;Acc:425865]
66. GOLGB1 ENSGALG00000041494 2376 0.981 - - - - - - - 0.981 - - golgin B1 [Source:HGNC Symbol;Acc:HGNC:4429]
67. YLPM1 671 0.98 - - 0.980 - - - - - - - YLP motif containing 1
68. PYCR1 ENSGALG00000007300 7987 0.98 - - - - - - - 0.980 - - pyrroline-5-carboxylate reductase 1 [Source:NCBI gene;Acc:769203]
69. NCAPD3 ENSGALG00000001491 221 0.98 - - 0.980 - - - - - - - non-SMC condensin II complex subunit D3, transcript variant X3
70. AP3M1 ENSGALG00000005070 712 0.98 - - 0.980 - - - - - - - adaptor related protein complex 3 subunit mu 1 [Source:NCBI gene;Acc:423736]
71. STX18 ENSGALG00000015012 1489 0.98 - - - - - - - 0.980 - - syntaxin 18 [Source:NCBI gene;Acc:422848]
72. ATP2B2 ENSGALG00000030908 584 0.979 - - 0.979 - - - - - - - ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
73. CHAF1A ENSGALG00000001126 6506 0.978 - - - - - - - 0.978 - - chromatin assembly factor 1 subunit A [Source:NCBI gene;Acc:770217]
74. ACOT9 ENSGALG00000016351 330 0.978 - - 0.978 - - - - - - - acyl-CoA thioesterase 9 [Source:NCBI gene;Acc:418600]
75. ZNF423 ENSGALG00000003891 103 0.978 - - 0.978 - - - - - - - zinc finger protein 423 [Source:HGNC Symbol;Acc:HGNC:16762]
76. TMEM97 ENSGALG00000005702 2037 0.977 - - 0.977 - - - - - - - transmembrane protein 97 [Source:HGNC Symbol;Acc:HGNC:28106]
77. NR2F2 ENSGALG00000007000 4911 0.976 - - - - - - - 0.976 - - nuclear receptor subfamily 2 group F member 2 [Source:NCBI gene;Acc:386585]
78. ENSGALG00000014190 ENSGALG00000014190 5735 0.976 - - - - - - - 0.976 - -
79. RNF214 ENSGALG00000036993 3729 0.975 - - - - - - - 0.975 - - ring finger protein 214 [Source:HGNC Symbol;Acc:HGNC:25335]
80. NET1 ENSGALG00000008437 9850 0.974 - - - - - - - 0.974 - - neuroepithelial cell transforming 1 [Source:NCBI gene;Acc:416693]
81. CASP1 ENSGALG00000001049 1067 0.974 - - 0.974 - - - - - - - caspase 1, transcript variant X2
82. ENTPD5 ENSGALG00000010202 69 0.974 - - 0.974 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 5 [Source:HGNC Symbol;Acc:HGNC:3367]
83. RPUSD1 ENSGALG00000005315 651 0.974 - - 0.974 - - - - - - - RNA pseudouridylate synthase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:14173]
84. UCK2 ENSGALG00000003510 2512 0.974 - - - - - - - 0.974 - - uridine-cytidine kinase 2 [Source:NCBI gene;Acc:424406]
85. BRCC3 ENSGALG00000005383 4844 0.974 - - - - - - - 0.974 - - BRCA1/BRCA2-containing complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:24185]
86. LHFP 167 0.974 - - 0.974 - - - - - - - lipoma HMGIC fusion partner
87. SORCS1 ENSGALG00000008465 468 0.974 - - 0.974 - - - - - - - sortilin related VPS10 domain containing receptor 1 [Source:HGNC Symbol;Acc:HGNC:16697]
88. DUSP14 ENSGALG00000027641 3662 0.974 - - - - - - - 0.974 - - dual specificity phosphatase 14 [Source:HGNC Symbol;Acc:HGNC:17007]
89. IP6K1 ENSGALG00000002510 827 0.973 - - 0.973 - - - - - - - inositol hexakisphosphate kinase 1 [Source:HGNC Symbol;Acc:HGNC:18360]
90. TRIM24 ENSGALG00000012823 2725 0.973 - - - - - - - 0.973 - - tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
91. SRP72 ENSGALG00000011403 13666 0.972 - - - - - - - 0.972 - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
92. gga-mir-1306 ENSGALG00000025271 1231 0.972 - - - - - - - 0.972 - - gga-mir-1306 [Source:miRBase;Acc:MI0007057]
93. FBXO34 ENSGALG00000032563 656 0.972 - - 0.972 - - - - - - - F-box protein 34 [Source:NCBI gene;Acc:423554]
94. KHDRBS1 ENSGALG00000003272 4249 0.971 - - - - - - - 0.971 - - KH RNA binding domain containing, signal transduction associated 1 [Source:NCBI gene;Acc:374071]
95. EIF2AK2 ENSGALG00000010560 749 0.971 - - 0.971 - - - - - - - eukaryotic translation initiation factor 2 alpha kinase 2 [Source:NCBI gene;Acc:395147]
96. ARHGEF4 ENSGALG00000002193 558 0.97 - - - - - - - 0.970 - - Rho guanine nucleotide exchange factor 4 [Source:HGNC Symbol;Acc:HGNC:684]
97. LYPD6B ENSGALG00000028759 831 0.97 - - 0.970 - - - - - - - LY6/PLAUR domain containing 6B [Source:HGNC Symbol;Acc:HGNC:27018]
98. USP32 ENSGALG00000005350 1686 0.969 - - - - - - - 0.969 - - ubiquitin specific peptidase 32, transcript variant X2
99. ZEB2 ENSGALG00000040465 315 0.969 - - 0.969 - - - - - - - Gallus gallus zinc finger E-box binding homeobox 2 (ZEB2), mRNA. [Source:RefSeq mRNA;Acc:NM_001318466]
100. TCEA1 ENSGALG00000015274 2706 0.969 - - - - - - - 0.969 - - transcription elongation factor A1 [Source:NCBI gene;Acc:421119]

There are 533 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA