Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for PKP4

Gene Name Gene ID Reads Annotation
PKP4 ENSDARG00000045331 577 plakophilin 4 [Source:ZFIN;Acc:ZDB-GENE-120411-14]










Genes with expression patterns similar to PKP4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. PKP4 ENSDARG00000045331 577 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 plakophilin 4 [Source:ZFIN;Acc:ZDB-GENE-120411-14]
2. rasal2 ENSDARG00000036257 3223 1.66 - 0.920 - 0.740 - - - - - RAS protein activator like 2 [Source:ZFIN;Acc:ZDB-GENE-070912-180]
3. thbs3a ENSDARG00000077641 631 1.566 - 0.777 - - - - - 0.789 - thrombospondin 3a [Source:ZFIN;Acc:ZDB-GENE-020708-3]
4. SCYL2 ENSDARG00000032627 683 1.511 - 0.711 - 0.800 - - - - - SCY1 like pseudokinase 2 [Source:HGNC Symbol;Acc:HGNC:19286]
5. rnf141 ENSDARG00000041802, ENSDARG00000113109 531 1.51 - - - 0.805 - 0.705 - - - ring finger protein 141 [Source:ZFIN;Acc:ZDB-GENE-040625-71]
6. arrdc1b ENSDARG00000079839 236 1.486 - 0.764 - - - - - 0.722 - arrestin domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080515-2]
7. agk ENSDARG00000009837, ENSDARG00000113514 811 1.454 - - - 0.744 - 0.710 - - - acylglycerol kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6202]
8. nudcd1 ENSDARG00000036158 608 1.419 - 0.718 - - - 0.701 - - - NudC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-483]
9. SLC17A7 SLC17A7 1226 0.902 - - - - - - 0.902 - -
10. AL954697.2 AL954697.2 1809 0.896 - 0.896 - - - - - - -
11. rabgef1 ENSDARG00000014430 1176 0.894 - - - 0.894 - - - - - RAB guanine nucleotide exchange factor (GEF) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1486]
12. ccdc19 ccdc19 495 0.878 - - - 0.878 - - - - -
13. mark4a ENSDARG00000023914, ENSDARG00000112220 445 0.877 - - - 0.877 - - - - - MAP/microtubule affinity-regulating kinase 4a [Source:ZFIN;Acc:ZDB-GENE-060531-156]
14. rxrgb ENSDARG00000004697 332 0.874 - - - 0.874 - - - - - retinoid X receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-040718-34]
15. slc17a9b ENSDARG00000011049 231 0.873 - - - 0.873 - - - - - solute carrier family 17 (vesicular nucleotide transporter), member 9b [Source:ZFIN;Acc:ZDB-GENE-040718-380]
16. C17H15orf52 244 0.871 - - - 0.871 - - - - - chromosome 17 C15orf52 homolog, transcript variant X3
17. CACNG4 CACNG4 123 0.871 - - - 0.871 - - - - -
18. si:ch211-212k5.2 si:ch211-212k5.2 152 0.871 - - - 0.871 - - - - -
19. SLITRK6 ENSDARG00000098769 217 0.87 - - - 0.870 - - - - - SLIT and NTRK-like family, member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2816]
20. yipf2 ENSDARG00000021399 702 0.87 - - - 0.870 - - - - - Yip1 domain family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040724-124]
21. LPHN1 LPHN1 152 0.87 - 0.870 - - - - - - -
22. b3gat3 ENSDARG00000001939 58 0.869 - - - 0.869 - - - - - beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) [Source:ZFIN;Acc:ZDB-GENE-020419-3]
23. rdh12l ENSDARG00000045277 139 0.868 - - - 0.868 - - - - - retinol dehydrogenase 12, like [Source:ZFIN;Acc:ZDB-GENE-040801-48]
24. si:ch211-136a13.1 ENSDARG00000060927 250 0.868 - - - 0.868 - - - - - si:ch211-136a13.1 [Source:ZFIN;Acc:ZDB-GENE-050419-214]
25. DNAJC14 ENSDARG00000105398 20 0.867 - - - - - - - 0.867 - DnaJ (Hsp40) homolog, subfamily C, member 14 [Source:ZFIN;Acc:ZDB-GENE-121105-7]
26. IL17RA_1 IL17RA_1 39 0.867 - - - 0.867 - - - - -
27. ppcs ENSDARG00000061889 224 0.867 - - - 0.867 - - - - - phosphopantothenoylcysteine synthetase [Source:ZFIN;Acc:ZDB-GENE-060512-104]
28. pgm2 ENSDARG00000018178 985 0.866 - - - 0.866 - - - - - phosphoglucomutase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2218]
29. wdr54 ENSDARG00000010248 245 0.865 - - - 0.865 - - - - - WD repeat domain 54 [Source:ZFIN;Acc:ZDB-GENE-040801-151]
30. calhm2 ENSDARG00000039482 138 0.865 - - - 0.865 - - - - - calcium homeostasis modulator 2 [Source:ZFIN;Acc:ZDB-GENE-030616-561]
31. flcn ENSDARG00000062385, ENSDARG00000116055 614 0.865 - - - 0.865 - - - - - folliculin [Source:ZFIN;Acc:ZDB-GENE-060421-3470]
32. dot1l ENSDARG00000061992 602 0.865 - - - 0.865 - - - - - DOT1-like histone H3K79 methyltransferase [Source:ZFIN;Acc:ZDB-GENE-060503-341]
33. bdnf ENSDARG00000018817 193 0.864 - - - 0.864 - - - - - brain-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-000412-1]
34. KCNA3 KCNA3 748 0.864 - - - 0.864 - - - - -
35. si:ch211-120e1.6 si:ch211-120e1.6 292 0.864 - - - 0.864 - - - - -
36. zgc:165518 ENSDARG00000075737 35 0.864 - - - 0.864 - - - - - zgc:165518 [Source:ZFIN;Acc:ZDB-GENE-070720-15]
37. sorbs1 ENSDARG00000103435 2297 0.863 - - - 0.863 - - - - - sorbin and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090313-168]
38. foxo1a ENSDARG00000099555 288 0.863 - - - 0.863 - - - - - forkhead box O1 a [Source:ZFIN;Acc:ZDB-GENE-061013-59]
39. ahcyl1 ENSDARG00000056331 1765 0.862 - 0.862 - - - - - - - adenosylhomocysteinase-like 1 [Source:ZFIN;Acc:ZDB-GENE-021206-7]
40. osgin2 ENSDARG00000040302 45 0.861 - - - 0.861 - - - - - oxidative stress induced growth inhibitor family member 2 [Source:ZFIN;Acc:ZDB-GENE-081028-57]
41. OSBPL3 OSBPL3 145 0.861 - - - 0.861 - - - - -
42. SLC5A6 SLC5A6 179 0.861 - - - 0.861 - - - - -
43. AL840631.3 AL840631.3 82 0.86 - - - 0.860 - - - - -
44. STAC ENSDARG00000074004 83 0.86 - - - 0.860 - - - - - SH3 and cysteine rich domain [Source:ZFIN;Acc:ZDB-GENE-131121-459]
45. si:dkey-151m22.8 ENSDARG00000095934 41 0.86 - - - 0.860 - - - - - si:dkey-151m22.8 [Source:ZFIN;Acc:ZDB-GENE-110411-250]
46. zgc:173480 171 0.86 - - - 0.860 - - - - - zgc:173480
47. dnajb1b ENSDARG00000041394 25 0.86 - - - 0.860 - - - - - DnaJ (Hsp40) homolog, subfamily B, member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5455]
48. slc34a1a ENSDARG00000028824 35 0.859 - - - 0.859 - - - - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-101006-3]
49. ftr67 ENSDARG00000098820 611 0.859 - - - 0.859 - - - - - finTRIM family, member 67 [Source:ZFIN;Acc:ZDB-GENE-060312-27]
50. olfml3a ENSDARG00000061852 139 0.858 - - - 0.858 - - - - - olfactomedin-like 3a [Source:ZFIN;Acc:ZDB-GENE-060825-31]
51. plod1a ENSDARG00000059746 3364 0.858 - - - 0.858 - - - - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3165]
52. ITFG3 ITFG3 1803 0.858 - - - 0.858 - - - - -
53. tnni2a.2 ENSDARG00000005841 483 0.858 - - - 0.858 - - - - - troponin I type 2a (skeletal, fast), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040426-970]
54. nox1 ENSDARG00000087574 60 0.858 - - - 0.858 - - - - - NADPH oxidase 1 [Source:ZFIN;Acc:ZDB-GENE-070404-1]
55. abhd2a ENSDARG00000025797 312 0.858 - - - 0.858 - - - - - abhydrolase domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-040426-784]
56. fam84a ENSDARG00000018921 375 0.858 - - - 0.858 - - - - - family with sequence similarity 84, member A [Source:ZFIN;Acc:ZDB-GENE-040426-1247]
57. lhfpl4a ENSDARG00000111810 206 0.857 - - - 0.857 - - - - - lipoma HMGIC fusion partner-like 4a [Source:ZFIN;Acc:ZDB-GENE-111017-1]
58. ntf7 ntf7 72 0.857 - - - 0.857 - - - - -
59. CABZ01038313.1 CABZ01038313.1 79 0.857 - - - - - - - 0.857 -
60. ecscr ENSDARG00000087457 319 0.857 - - - 0.857 - - - - - endothelial cell surface expressed chemotaxis and apoptosis regulator [Source:ZFIN;Acc:ZDB-GENE-050411-37]
61. ASXL2 ENSDARG00000076501 378 0.857 - - - 0.857 - - - - - ASXL transcriptional regulator 2 [Source:ZFIN;Acc:ZDB-GENE-100412-1]
62. fam49bb ENSDARG00000045417 513 0.857 - - - 0.857 - - - - - family with sequence similarity 49, member Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2590]
63. hbs1l ENSDARG00000036778, ENSDARG00000115090 130 0.857 - - - 0.857 - - - - - HBS1-like translational GTPase [Source:ZFIN;Acc:ZDB-GENE-030131-2987]
64. creld2 ENSDARG00000029071, ENSDARG00000116264 333 0.857 - - - 0.857 - - - - - cysteine-rich with EGF-like domains 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1626]
65. armc9 ENSDARG00000087299 459 0.856 - - - 0.856 - - - - - armadillo repeat containing 9 [Source:ZFIN;Acc:ZDB-GENE-100922-67]
66. mfsd10 ENSDARG00000086786 304 0.856 - - - 0.856 - - - - - major facilitator superfamily domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-050417-154]
67. VASH1 ENSDARG00000092716 33 0.855 - - - 0.855 - - - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
68. grap2b ENSDARG00000101169 58 0.855 - - - 0.855 - - - - - GRB2 related adaptor protein 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1485]
69. cactin ENSDARG00000059866 553 0.855 - - - 0.855 - - - - - cactin [Source:ZFIN;Acc:ZDB-GENE-060503-322]
70. fam169ab ENSDARG00000004177 232 0.854 - - - 0.854 - - - - - family with sequence similarity 169, member Ab [Source:ZFIN;Acc:ZDB-GENE-091118-95]
71. kptn ENSDARG00000015937, ENSDARG00000111197 290 0.854 - - - 0.854 - - - - - kaptin (actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-040801-258]
72. LRIG3 ENSDARG00000079363 909 0.854 - - - 0.854 - - - - - leucine-rich repeats and immunoglobulin-like domains 3 [Source:ZFIN;Acc:ZDB-GENE-130530-866]
73. arf3a ENSDARG00000070539 29 0.853 - - - - - - - 0.853 - ADP-ribosylation factor 3a [Source:ZFIN;Acc:ZDB-GENE-040801-176]
74. nicn1 ENSDARG00000069677, ENSDARG00000116330 790 0.852 - - - - - - - 0.852 - nicolin 1 [Source:ZFIN;Acc:ZDB-GENE-040801-129]
75. rnf11b ENSDARG00000040635 242 0.852 - - - 0.852 - - - - - ring finger protein 11b [Source:ZFIN;Acc:ZDB-GENE-050913-69]
76. skilb ENSDARG00000022904 300 0.852 - - - 0.852 - - - - - SKI-like proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-080723-40]
77. zgc:77151 ENSDARG00000054307 120 0.851 - - - 0.851 - - - - - zgc:77151 [Source:ZFIN;Acc:ZDB-GENE-030131-9097]
78. fam198b ENSDARG00000077054 98 0.851 - - - 0.851 - - - - - family with sequence similarity 198, member B [Source:ZFIN;Acc:ZDB-GENE-100105-1]
79. snx9a ENSDARG00000000837 424 0.851 - - - 0.851 - - - - - sorting nexin 9a [Source:ZFIN;Acc:ZDB-GENE-030616-66]
80. si:dkey-14k9.3 ENSDARG00000045595 256 0.851 - - - 0.851 - - - - - si:dkey-14k9.3 [Source:ZFIN;Acc:ZDB-GENE-030131-2893]
81. apba1b ENSDARG00000074328 254 0.85 - - - 0.850 - - - - - amyloid beta (A4) precursor protein-binding, family A, member 1b [Source:ZFIN;Acc:ZDB-GENE-070925-3]
82. rad9a ENSDARG00000056984, ENSDARG00000115514 152 0.85 - - - 0.850 - - - - - RAD9 checkpoint clamp component A [Source:ZFIN;Acc:ZDB-GENE-040426-935]
83. CABZ01077449.1 CABZ01077449.1 3 0.848 - - - - - - - 0.848 -
84. si:dkeyp-122a9.1 ENSDARG00000091954 3 0.848 - - - - - - - 0.848 - si:dkeyp-122a9.1 [Source:ZFIN;Acc:ZDB-GENE-060503-651]
85. csde1_1 ENSDARG00000074758 2759 0.848 - - - 0.848 - - - - - cold shock domain containing E1, RNA-binding [Source:ZFIN;Acc:ZDB-GENE-030131-8623]
86. myo5ab ENSDARG00000025218 14 0.848 - - - - - - - 0.848 - myosin VAb [Source:ZFIN;Acc:ZDB-GENE-050411-72]
87. U5_5 U5_5 3 0.848 - - - - - - - 0.848 -
88. olfcg5 ENSDARG00000102459 5 0.848 - - - - - - - 0.848 - olfactory receptor C family, g5 [Source:ZFIN;Acc:ZDB-GENE-060503-913]
89. mms19 ENSDARG00000079067 65 0.848 - - - 0.848 - - - - - MMS19 homolog, cytosolic iron-sulfur assembly component [Source:ZFIN;Acc:ZDB-GENE-120316-2]
90. gsdf ENSDARG00000075301 6 0.848 - - - - - - - 0.848 - gonadal somatic cell derived factor [Source:ZFIN;Acc:ZDB-GENE-101029-3]
91. slc44a1a ENSDARG00000015946 10 0.848 - - - - - - - 0.848 - solute carrier family 44 (choline transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050417-204]
92. CU570987.1 CU570987.1 7 0.848 - - - - - - - 0.848 -
93. ddx31 ENSDARG00000035507 167 0.847 - - - 0.847 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 [Source:ZFIN;Acc:ZDB-GENE-030131-3973]
94. zgc:92242 ENSDARG00000029443 367 0.847 - - - 0.847 - - - - - zgc:92242 [Source:ZFIN;Acc:ZDB-GENE-040718-371]
95. ANKRD6 ANKRD6 73 0.847 - - - 0.847 - - - - -
96. si:ch211-126i22.5 ENSDARG00000060911 209 0.847 - - - 0.847 - - - - - si:ch211-126i22.5 [Source:ZFIN;Acc:ZDB-GENE-091204-183]
97. NTF4 NTF4 355 0.846 - - - 0.846 - - - - -
98. SLC6A7 ENSDARG00000030006 304 0.846 - - - - - 0.846 - - - solute carrier family 6 member 7 [Source:ZFIN;Acc:ZDB-GENE-070112-1492]
99. cmc1 ENSDARG00000103670 1197 0.845 - - - 0.845 - - - - - C-x(9)-C motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2626]
100. mxra7 ENSDARG00000095300 332 0.845 - - - 0.845 - - - - - matrix-remodelling associated 7 [Source:ZFIN;Acc:ZDB-GENE-041014-95]

There are 501 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA