Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PKP1

Gene Name Gene ID Reads Annotation
PKP1 ENSGALG00000000299 155 plakophilin 1 [Source:HGNC Symbol;Acc:HGNC:9023]











Genes with expression patterns similar to PKP1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PKP1 ENSGALG00000000299 155 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 plakophilin 1 [Source:HGNC Symbol;Acc:HGNC:9023]
2. MAN1B1 ENSGALG00000037375 308 1.544 - - 0.704 - - - 0.840 - - - mannosidase alpha class 1B member 1 [Source:HGNC Symbol;Acc:HGNC:6823]
3. PPL ENSGALG00000002201 13 0.927 - - - - - - - - - 0.927 periplakin
4. CALML3 ENSGALG00000008424 88 0.901 - - - - - 0.901 - - - - calmodulin like 3 [Source:NCBI gene;Acc:416692]
5. NCOA2 ENSGALG00000036017 256 0.883 - - 0.883 - - - - - - - nuclear receptor coactivator 2, transcript variant X9
6. SLC27A6 ENSGALG00000000184 98 0.876 - - - - - - 0.876 - - - solute carrier family 27 member 6 [Source:HGNC Symbol;Acc:HGNC:11000]
7. CTSB ENSGALG00000030016 177 0.871 - - - - - - 0.871 - - - cathepsin B [Source:NCBI gene;Acc:396329]
8. RALGAPA2 240 0.866 - - - - - - 0.866 - - - Ral GTPase activating protein, alpha subunit 2 (catalytic), transcript variant X6
9. CFH ENSGALG00000002431 31 0.865 - - - - - - 0.865 - - - complement factor H, transcript variant X1
10. ZC3H12C ENSGALG00000017154 59 0.865 - - - - - - 0.865 - - - zinc finger CCCH-type containing 12C [Source:HGNC Symbol;Acc:HGNC:29362]
11. ENSGALG00000003817 ENSGALG00000003817 45 0.861 - - - - - - 0.861 - - -
12. WBP2NL ENSGALG00000011908 23 0.859 - - - - - - 0.859 - - - Gallus gallus WBP2 N-terminal like (WBP2NL), mRNA. [Source:RefSeq mRNA;Acc:NM_001318465]
13. NBEAL2 ENSGALG00000039120 277 0.859 - - - - - - 0.859 - - - neurobeachin like 2 [Source:HGNC Symbol;Acc:HGNC:31928]
14. EPG5 ENSGALG00000036259 71 0.858 - - 0.858 - - - - - - - ectopic P-granules autophagy protein 5 homolog [Source:HGNC Symbol;Acc:HGNC:29331]
15. C8G ENSGALG00000040644 443 0.858 - - - - - - 0.858 - - - complement C8 gamma chain [Source:HGNC Symbol;Acc:HGNC:1354]
16. SKI ENSGALG00000001229 50 0.858 - - - - - - 0.858 - - - SKI proto-oncogene [Source:NCBI gene;Acc:428181]
17. DENND1A ENSGALG00000001157 503 0.857 - - - - - - 0.857 - - - DENN domain containing 1A [Source:HGNC Symbol;Acc:HGNC:29324]
18. UBAC2 ENSGALG00000016880 1343 0.857 - - - - - - 0.857 - - - UBA domain containing 2 [Source:NCBI gene;Acc:418778]
19. TRPC6 ENSGALG00000029416 281 0.856 - - - - - - 0.856 - - - transient receptor potential cation channel subfamily C member 6 [Source:HGNC Symbol;Acc:HGNC:12338]
20. C20orf194 C20orf194 145 0.856 - - 0.856 - - - - - - -
21. C11orf74 C11orf74 260 0.856 - - - - - - - - - 0.856
22. DHX35 ENSGALG00000003658 1090 0.855 - - - - - - 0.855 - - - DEAH-box helicase 35 [Source:HGNC Symbol;Acc:HGNC:15861]
23. PLEK2 ENSGALG00000009562 706 0.854 - - - - - - 0.854 - - - pleckstrin 2 [Source:NCBI gene;Acc:423278]
24. ARHGAP20 ENSGALG00000017150 100 0.854 - - - - - - 0.854 - - - Rho GTPase activating protein 20 [Source:HGNC Symbol;Acc:HGNC:18357]
25. NCBP2 ENSGALG00000006843 938 0.854 - - - - - - 0.854 - - - nuclear cap binding protein subunit 2, 20kDa [Source:NCBI gene;Acc:424889]
26. CAPRIN1 ENSGALG00000013532 1699 0.849 - - - - - - 0.849 - - - cell cycle associated protein 1 [Source:NCBI gene;Acc:426151]
27. RAPGEF5 ENSGALG00000034024 1264 0.846 - - - - - - 0.846 - - - Rap guanine nucleotide exchange factor 5 [Source:HGNC Symbol;Acc:HGNC:16862]
28. CCDC117 ENSGALG00000005784 185 0.844 - - - - - - 0.844 - - - coiled-coil domain containing 117 [Source:HGNC Symbol;Acc:HGNC:26599]
29. GPSM2 ENSGALG00000002090 50 0.844 - - - - - - 0.844 - - - G protein signaling modulator 2 [Source:HGNC Symbol;Acc:HGNC:29501]
30. CCDC135 CCDC135 220 0.843 - - - - - - 0.843 - - -
31. TMEM150C ENSGALG00000011175 218 0.843 - - - - - - 0.843 - - - transmembrane protein 150C [Source:HGNC Symbol;Acc:HGNC:37263]
32. NPY2R ENSGALG00000009280 29 0.843 - - - - - - 0.843 - - - neuropeptide Y receptor Y2 [Source:NCBI gene;Acc:422405]
33. MICAL3 ENSGALG00000013042 90 0.841 - - - - - - 0.841 - - - microtubule associated monooxygenase, calponin and LIM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24694]
34. SRSF2 ENSGALG00000017357 180 0.839 - - 0.839 - - - - - - - serine and arginine rich splicing factor 2 [Source:NCBI gene;Acc:396195]
35. ZRANB3 ENSGALG00000012223 475 0.838 - - - - - - 0.838 - - - zinc finger RANBP2-type containing 3 [Source:HGNC Symbol;Acc:HGNC:25249]
36. C3H6ORF154 C3H6ORF154 1078 0.836 - - - - - - 0.836 - - -
37. ANXA8 ENSGALG00000005956 479 0.836 - - - - - - 0.836 - - - annexin A8, transcript variant X1
38. SCN9A ENSGALG00000027793 161 0.834 - - - - - - 0.834 - - - sodium voltage-gated channel alpha subunit 9 [Source:NCBI gene;Acc:395946]
39. TCIRG1 ENSGALG00000036069 1117 0.83 - - 0.830 - - - - - - - T-cell immune regulator 1, ATPase H+ transporting V0 subunit a3 [Source:NCBI gene;Acc:395472]
40. CREBL2 ENSGALG00000037030 1247 0.828 - - - - - - 0.828 - - - cAMP responsive element binding protein like 2 [Source:NCBI gene;Acc:426496]
41. SLC5A11 ENSGALG00000005933 28 0.828 - - - - - - 0.828 - - - solute carrier family 5 member 11 [Source:HGNC Symbol;Acc:HGNC:23091]
42. FAM167B ENSGALG00000003301 11 0.828 - - - - - - - - - 0.828 family with sequence similarity 167 member B [Source:HGNC Symbol;Acc:HGNC:28133]
43. ZFHX4 ENSGALG00000037164 811 0.827 - - - - - - 0.827 - - - zinc finger homeobox 4 [Source:HGNC Symbol;Acc:HGNC:30939]
44. MPP2 ENSGALG00000035580 383 0.827 - - - - - - 0.827 - - - membrane palmitoylated protein 2 [Source:HGNC Symbol;Acc:HGNC:7220]
45. HSF3 ENSGALG00000040662 140 0.826 - - - - - - 0.826 - - - Heat shock factor protein 3 [Source:NCBI gene;Acc:422169]
46. SCUBE2 ENSGALG00000032161 63 0.825 - - - - - - 0.825 - - - signal peptide, CUB domain and EGF like domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30425]
47. DTNBP1 ENSGALG00000012703 539 0.824 - - - - - - 0.824 - - - dystrobrevin binding protein 1 [Source:NCBI gene;Acc:420840]
48. TFAP2C ENSGALG00000007690 768 0.822 - - - - - - 0.822 - - - transcription factor AP-2 gamma [Source:HGNC Symbol;Acc:HGNC:11744]
49. KIF9 ENSGALG00000005517 70 0.821 - - - - - - - - - 0.821 kinesin family member 9 [Source:HGNC Symbol;Acc:HGNC:16666]
50. DEPDC7 ENSGALG00000011681 1181 0.821 - - - - - - 0.821 - - - DEP domain containing 7 [Source:NCBI gene;Acc:421593]
51. PCYOX1L ENSGALG00000040340 2162 0.821 - - - - - - 0.821 - - - prenylcysteine oxidase 1 like [Source:HGNC Symbol;Acc:HGNC:28477]
52. FAM47E-STBD1 FAM47E-STBD1 1148 0.821 - - - - - - 0.821 - - -
53. MYO3B ENSGALG00000009602 315 0.82 - - 0.820 - - - - - - - myosin IIIB [Source:HGNC Symbol;Acc:HGNC:15576]
54. GNB1L ENSGALG00000001925 1981 0.82 - - - - - - 0.820 - - - G protein subunit beta 1 like [Source:NCBI gene;Acc:416781]
55. CNTN1 ENSGALG00000009523 158 0.82 - - - - - - 0.820 - - - contactin 1 [Source:NCBI gene;Acc:417786]
56. SNX16 ENSGALG00000029678 1104 0.82 - - - - - - 0.820 - - - sorting nexin 16 [Source:NCBI gene;Acc:420202]
57. CPE ENSGALG00000027788 153 0.816 - - - - - - 0.816 - - - carboxypeptidase E [Source:HGNC Symbol;Acc:HGNC:2303]
58. MTMR9 ENSGALG00000016649 2055 0.812 - - 0.812 - - - - - - - myotubularin related protein 9 [Source:NCBI gene;Acc:422033]
59. KCNIP1 ENSGALG00000002132 34 0.812 - - - - - - - - - 0.812 potassium voltage-gated channel interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:15521]
60. FICD ENSGALG00000004858 171 0.811 - - - - - - 0.811 - - - FIC domain containing [Source:HGNC Symbol;Acc:HGNC:18416]
61. TMEM248 ENSGALG00000033954 248 0.81 - - - - - - 0.810 - - - transmembrane protein 248 [Source:HGNC Symbol;Acc:HGNC:25476]
62. QARS ENSGALG00000029980 4207 0.809 - - - - - - 0.809 - - - glutaminyl-tRNA synthetase [Source:NCBI gene;Acc:416057]
63. PLXNB2 ENSGALG00000039861 338 0.809 - - - - - - 0.809 - - - plexin B2 [Source:HGNC Symbol;Acc:HGNC:9104]
64. SUPT6H ENSGALG00000000146 131 0.808 - - 0.808 - - - - - - - SPT6 homolog, histone chaperone [Source:HGNC Symbol;Acc:HGNC:11470]
65. C14orf79 C14orf79 401 0.808 - - 0.808 - - - - - - -
66. WHAMM ENSGALG00000006002 1678 0.806 - - - - - - 0.806 - - - WAS protein homolog associated with actin, golgi membranes and microtubules [Source:HGNC Symbol;Acc:HGNC:30493]
67. BAI3 BAI3 106 0.806 - - - - - - 0.806 - - -
68. MGTNIPA2L ENSGALG00000004975 143 0.805 - - - - - - - 0.805 - - magnesium transporter NIPA2-like
69. NMT2 ENSGALG00000008791 542 0.805 - - - - - - 0.805 - - - N-myristoyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:7858]
70. RBM48 ENSGALG00000009467 1096 0.804 - - 0.804 - - - - - - - RNA binding motif protein 48 [Source:NCBI gene;Acc:420555]
71. PIFO ENSGALG00000023763 11 0.804 - - - - - - - - - 0.804 primary cilia formation [Source:HGNC Symbol;Acc:HGNC:27009]
72. C14orf159 C14orf159 7 0.804 - - - - - - - - - 0.804
73. RASSF7 ENSGALG00000044251 8 0.804 - - - - - - - - - 0.804 Ras association domain family member 7 [Source:HGNC Symbol;Acc:HGNC:1166]
74. GTF2E1L ENSGALG00000013600 4 0.804 - - - - - - - - - 0.804 general transcription factor IIE subunit 1-like
75. L3MBTL1 1 0.804 - - - - - - - - - 0.804 l(3)mbt-like 1 (Drosophila)
76. NALCN ENSGALG00000016868 164 0.804 - - - - - - 0.804 - - - sodium leak channel, non-selective [Source:HGNC Symbol;Acc:HGNC:19082]
77. CD274 1 0.804 - - - - - - - - - 0.804 CD274 molecule, transcript variant X4
78. CNKSR2L ENSGALG00000007028 4 0.804 - - - - - - - - - 0.804 connector enhancer of kinase suppressor of Ras 2-like
79. ENSGALG00000027458 ENSGALG00000027458 2 0.804 - - - - - - - - - 0.804
80. ENSGALG00000027059 ENSGALG00000027059 7 0.804 - - - - - - - - - 0.804
81. ENSGALG00000026897 ENSGALG00000026897 6 0.804 - - - - - - - - - 0.804
82. SLC6A4 ENSGALG00000004246 5 0.804 - - - - - - - - - 0.804 solute carrier family 6 member 4 [Source:NCBI gene;Acc:404747]
83. FAM237A ENSGALG00000020836 21 0.804 - - - - - - - - - 0.804 family with sequence similarity 237 member A [Source:HGNC Symbol;Acc:HGNC:52388]
84. GRM1 ENSGALG00000012297 41 0.804 - - - - - - - - - 0.804 glutamate metabotropic receptor 1 [Source:HGNC Symbol;Acc:HGNC:4593]
85. ERBB4 ENSGALG00000003126 1 0.804 - - - - - - - - - 0.804 erb-b2 receptor tyrosine kinase 4 [Source:NCBI gene;Acc:395671]
86. ACACB 6 0.804 - - - - - - - - - 0.804 acetyl-CoA carboxylase beta
87. ENSGALG00000029029 ENSGALG00000029029 10 0.804 - - - - - - - - - 0.804
88. VNN1 ENSGALG00000013993 11 0.804 - - - - - - - - - 0.804 vanin 1 [Source:NCBI gene;Acc:421702]
89. PCOLCE2 ENSGALG00000002623 8 0.804 - - - - - - - - - 0.804 procollagen C-endopeptidase enhancer 2 [Source:HGNC Symbol;Acc:HGNC:8739]
90. GALNT15 ENSGALG00000011235 1 0.804 - - - - - - - - - 0.804 polypeptide N-acetylgalactosaminyltransferase 15 [Source:HGNC Symbol;Acc:HGNC:21531]
91. MYO19 9 0.804 - - - - - - - - - 0.804 myosin XIX, transcript variant X5
92. HCLS1 ENSGALG00000039682 34 0.804 - - - - - - - - - 0.804 hematopoietic cell-specific Lyn substrate 1 [Source:NCBI gene;Acc:426867]
93. CERS1 ENSGALG00000003160 3 0.804 - - - - - - - - - 0.804 ceramide synthase 1 [Source:NCBI gene;Acc:420118]
94. ASB2 ENSGALG00000010881 4 0.804 - - - - - - - - - 0.804 ankyrin repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:16012]
95. C2orf50 ENSGALG00000046449 17 0.804 - - - - - - - - - 0.804 chromosome 2 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26324]
96. SLC6A17 ENSGALG00000000394 10 0.804 - - - - - - - - - 0.804 solute carrier family 6 member 17 [Source:HGNC Symbol;Acc:HGNC:31399]
97. COL27A1 ENSGALG00000006958 12 0.804 - - - - - - - - - 0.804 collagen type XXVII alpha 1 chain, transcript variant X5
98. HGD ENSGALG00000014966 6 0.804 - - - - - - - - - 0.804 homogentisate 1,2-dioxygenase [Source:HGNC Symbol;Acc:HGNC:4892]
99. CYB561 ENSGALG00000024031 1 0.804 - - - - - - - - - 0.804 cytochrome b561 [Source:HGNC Symbol;Acc:HGNC:2571]
100. FHIT ENSGALG00000007172 580 0.802 - - - - - - 0.802 - - - fragile histidine triad [Source:NCBI gene;Acc:416071]

There are 217 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA