Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for PKM

Gene Name Gene ID Reads Annotation
PKM ENSGALG00000001992 93960 pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]











Genes with expression patterns similar to PKM

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PKM ENSGALG00000001992 93960 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
2. MARCKSL1 ENSGALG00000032335 88728 3.15 - - 0.724 - 0.803 0.785 - - 0.838 - MARCKS like 1 [Source:NCBI gene;Acc:770764]
3. ALDOC ENSGALG00000026077 106910 2.319 - - 0.796 - - 0.780 - - - 0.743 aldolase, fructose-bisphosphate C [Source:NCBI gene;Acc:395492]
4. NHLH1 ENSGALG00000025817 1617 2.279 - - 0.726 - - 0.766 - - 0.787 - nescient helix-loop-helix 1 [Source:NCBI gene;Acc:373910]
5. ZIC1 ENSGALG00000040532 6543 2.222 - - 0.733 - 0.762 - - - 0.727 - Zic family member 1 [Source:NCBI gene;Acc:374103]
6. SAMM50 ENSGALG00000014194 20437 1.811 - - - - 0.874 - 0.937 - - - SAMM50 sorting and assembly machinery component [Source:NCBI gene;Acc:418234]
7. HOXB3 ENSGALG00000043219 5198 1.803 - - - - 0.876 - 0.927 - - - homeobox B3 [Source:NCBI gene;Acc:395502]
8. MTF2 ENSGALG00000043087 15225 1.779 - - - - 0.835 - 0.944 - - - metal response element binding transcription factor 2 [Source:NCBI gene;Acc:395174]
9. GNB2L1 ENSGALG00000000122 194871 1.711 - - - - - - 0.955 - - 0.756 receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
10. EIF5A2 ENSGALG00000009309 143671 1.631 - - 0.760 - - - 0.871 - - - eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
11. ENSGALG00000026433 ENSGALG00000026433 14463 1.535 0.792 0.743 - - - - - - - -
12. TAGLN3 ENSGALG00000015379 7865 1.531 - - 0.795 - - - - - 0.736 - transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]
13. HMGN2 HMGN2 158543 1.504 - - - - - - - - 0.765 0.739
14. MIF ENSGALG00000006326 109683 1.504 - 0.712 0.792 - - - - - - - macrophage migration inhibitory factor (glycosylation-inhibiting factor) [Source:NCBI gene;Acc:100857237]
15. C1QBP ENSGALG00000001654 34814 1.499 - - - - - - - - 0.771 0.728 complement C1q binding protein [Source:HGNC Symbol;Acc:HGNC:1243]
16. ENSGALG00000027002 ENSGALG00000027002 7570 1.483 - - 0.722 - - - - - 0.761 -
17. RGMA ENSGALG00000039173 12874 1.47 - - - - - 0.709 - - 0.761 - repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]
18. SRGAP3 ENSGALG00000008378 4331 1.465 - - 0.720 - - - - - 0.745 - SLIT-ROBO Rho GTPase activating protein 3 [Source:NCBI gene;Acc:416115]
19. TUBB2B ENSGALG00000012821 41535 1.458 - - - - - 0.707 - - 0.751 - tubulin beta 2B class IIb [Source:NCBI gene;Acc:420883]
20. HES5 ENSGALG00000001141 6514 1.453 - - 0.733 - - - - - 0.720 - hes family bHLH transcription factor 5 [Source:NCBI gene;Acc:419392]
21. ALYREF ENSGALG00000007237 48479 1.441 - - - 0.714 - - - - - 0.727 Aly/REF export factor [Source:NCBI gene;Acc:769169]
22. ATF4 ENSGALG00000012135 53361 1.43 - 0.704 - - - - - - - 0.726 activating transcription factor 4 [Source:NCBI gene;Acc:395693]
23. WSCD2 ENSGALG00000004849 477 1.406 - - 0.706 - - 0.700 - - - - WSC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:29117]
24. SRSF7 ENSGALG00000033120 43444 0.969 - - - - - - 0.969 - - - serine and arginine rich splicing factor 7 [Source:NCBI gene;Acc:426265]
25. ACTG1 ENSGALG00000001381 63905 0.965 - - - - - - 0.965 - - - Actin, gamma 1 [Source:NCBI gene;Acc:415296]
26. NOL9 ENSGALG00000028958 23978 0.964 - - - - - - 0.964 - - - nucleolar protein 9 [Source:HGNC Symbol;Acc:HGNC:26265]
27. GFPT1 ENSGALG00000036391 14025 0.957 - - - - - - 0.957 - - - glutamine--fructose-6-phosphate transaminase 1 [Source:NCBI gene;Acc:419514]
28. LPHN2 LPHN2 16507 0.956 - - - - - - 0.956 - - -
29. NAA15 ENSGALG00000009782 18563 0.956 - - - - - - 0.956 - - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit [Source:HGNC Symbol;Acc:HGNC:30782]
30. PPP1R8 ENSGALG00000000729 11797 0.955 - - - - - - 0.955 - - - protein phosphatase 1 regulatory subunit 8 [Source:NCBI gene;Acc:419564]
31. BTG1 ENSGALG00000011276 17496 0.954 - - - - - - 0.954 - - - BTG anti-proliferation factor 1 [Source:NCBI gene;Acc:396295]
32. NSF ENSGALG00000001055 7399 0.949 - - - - - - 0.949 - - - N-ethylmaleimide sensitive factor, vesicle fusing ATPase [Source:NCBI gene;Acc:419972]
33. STT3B ENSGALG00000011465 11939 0.947 - - - - - - 0.947 - - - STT3B, catalytic subunit of the oligosaccharyltransferase complex [Source:NCBI gene;Acc:428444]
34. FKBP9 ENSGALG00000037669 12079 0.946 - - - - - - 0.946 - - - FK506 binding protein 9 [Source:NCBI gene;Acc:395652]
35. SSR1 ENSGALG00000012798 62626 0.945 - - - - - - 0.945 - - - signal sequence receptor subunit 1 [Source:NCBI gene;Acc:420871]
36. LARS ENSGALG00000007494 13966 0.945 - - - - - - 0.945 - - - leucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:6512]
37. PCNA ENSGALG00000029292 19163 0.945 - - - - - - 0.945 - - - proliferating cell nuclear antigen [Source:NCBI gene;Acc:373984]
38. TMEM9B ENSGALG00000005908 14074 0.944 - - - - - - 0.944 - - - TMEM9 domain family member B [Source:HGNC Symbol;Acc:HGNC:1168]
39. EIF5B ENSGALG00000016764 30681 0.943 - - - - - - 0.943 - - - eukaryotic translation initiation factor 5B [Source:NCBI gene;Acc:395514]
40. GAS41 GAS41 9941 0.941 - - - - - - 0.941 - - -
41. TLE4 TLE4 7278 0.941 - - - - - - 0.941 - - -
42. SF3A1 ENSGALG00000007937 11716 0.94 - - - - - - 0.940 - - - splicing factor 3a subunit 1 [Source:NCBI gene;Acc:427717]
43. OLFML3 ENSGALG00000001956 28633 0.937 - - - - - - 0.937 - - - olfactomedin like 3 [Source:NCBI gene;Acc:419882]
44. FAM206A ENSGALG00000019524 7170 0.936 - - - - - - 0.936 - - - family with sequence similarity 206 member A [Source:NCBI gene;Acc:420983]
45. BID ENSGALG00000013039 12427 0.935 - - - - - - 0.935 - - - BH3 interacting domain death agonist [Source:NCBI gene;Acc:395236]
46. CASC4 ENSGALG00000008208 8338 0.935 - - - - - - 0.935 - - - cancer susceptibility 4 [Source:NCBI gene;Acc:415575]
47. PPP1CB ENSGALG00000010026 6909 0.934 - - - - - - 0.934 - - - protein phosphatase 1 catalytic subunit beta [Source:NCBI gene;Acc:396019]
48. WDR33 ENSGALG00000002043 6340 0.933 - - - - - - 0.933 - - - WD repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:25651]
49. USP34 ENSGALG00000004455 6667 0.933 - - - - - - 0.933 - - - ubiquitin specific peptidase 34 [Source:NCBI gene;Acc:421193]
50. FANCC ENSGALG00000012618 7002 0.932 - - - - - - 0.932 - - - FA complementation group C [Source:NCBI gene;Acc:427468]
51. SLC9A3R2 ENSGALG00000005608 4220 0.931 - - - - - - 0.931 - - - SLC9A3 regulator 2 [Source:HGNC Symbol;Acc:HGNC:11076]
52. CCDC47 ENSGALG00000000564 6584 0.931 - - - - - - 0.931 - - - coiled-coil domain containing 47 [Source:HGNC Symbol;Acc:HGNC:24856]
53. GTF2I ENSGALG00000021665 6812 0.931 - - - - - - 0.931 - - - general transcription factor IIi [Source:HGNC Symbol;Acc:HGNC:4659]
54. SH2D3C ENSGALG00000005036 5101 0.931 - - - - - - 0.931 - - - SH2 domain containing 3C [Source:HGNC Symbol;Acc:HGNC:16884]
55. POGZ ENSGALG00000036365 4056 0.927 - - - - - - 0.927 - - - pogo transposable element with ZNF domain, transcript variant X2
56. ZCCHC17 ENSGALG00000000618 5163 0.927 - - - - - - 0.927 - - - zinc finger CCHC-type containing 17 [Source:NCBI gene;Acc:404295]
57. VPS41 ENSGALG00000031635 4391 0.927 - - - - - - 0.927 - - - VPS41, HOPS complex subunit [Source:NCBI gene;Acc:420762]
58. RARRES2 ENSGALG00000042642 3043 0.926 - - - - - - 0.926 - - - retinoic acid receptor responder (tazarotene induced) 2 [Source:NCBI gene;Acc:420366]
59. TRIM37 ENSGALG00000005084 4036 0.925 - - - - - - 0.925 - - - tripartite motif containing 37 [Source:NCBI gene;Acc:417628]
60. C-MET C-MET 1650 0.923 - - - - - - 0.923 - - -
61. FAAH ENSGALG00000010433 3309 0.923 - - - - - - 0.923 - - - fatty acid amide hydrolase [Source:HGNC Symbol;Acc:HGNC:3553]
62. SYNCRIP ENSGALG00000015830 30555 0.91 - - - - - - 0.910 - - - synaptotagmin binding cytoplasmic RNA interacting protein [Source:NCBI gene;Acc:421831]
63. STK3 ENSGALG00000032850 6339 0.909 - - - - - - 0.909 - - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
64. MAP1B ENSGALG00000014999 6288 0.89 - - - - 0.890 - - - - - microtubule associated protein 1B
65. NDST2 ENSGALG00000005107 4224 0.889 - - - - 0.889 - - - - - N-deacetylase and N-sulfotransferase 2, transcript variant X2
66. NSG1 ENSGALG00000015010 5829 0.888 - - - - 0.888 - - - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
67. HTRA3 ENSGALG00000034673 512 0.888 - - - - 0.888 - - - - - HtrA serine peptidase 3 [Source:HGNC Symbol;Acc:HGNC:30406]
68. SEC61A2 ENSGALG00000036300 4235 0.888 - - - - 0.888 - - - - - Gallus gallus Sec61 translocon alpha 2 subunit (SEC61A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001321620]
69. MRPL22 ENSGALG00000003919 2760 0.887 - - - - 0.887 - - - - - mitochondrial ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:14480]
70. gga-mir-6584 ENSGALG00000028834 1481 0.887 - - - - 0.887 - - - - - gga-mir-6584 [Source:miRBase;Acc:MI0022404]
71. C4orf27 C4orf27 16724 0.886 - - - - 0.886 - - - - -
72. RNF113A ENSGALG00000000538 3985 0.886 - - - - 0.886 - - - - - ring finger protein 113A [Source:NCBI gene;Acc:419956]
73. NOL6 ENSGALG00000030730 7191 0.886 - - - - 0.886 - - - - - nucleolar protein 6
74. PPAPDC1B PPAPDC1B 6698 0.885 - - - - 0.885 - - - - -
75. OPTC ENSGALG00000003554 3698 0.885 - - - - 0.885 - - - - - opticin [Source:NCBI gene;Acc:395130]
76. TNPO3 ENSGALG00000039420 5178 0.885 - - - - 0.885 - - - - - transportin 3 [Source:HGNC Symbol;Acc:HGNC:17103]
77. ABCC1 ENSGALG00000006646 2596 0.885 - - - - 0.885 - - - - - ATP binding cassette subfamily C member 1 [Source:NCBI gene;Acc:395416]
78. MYEOV2 MYEOV2 5155 0.885 - - - - 0.885 - - - - -
79. PHKA1 ENSGALG00000004801 2510 0.885 - - - - 0.885 - - - - - phosphorylase kinase regulatory subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:8925]
80. HYOU1 ENSGALG00000007659 3555 0.884 - - - - 0.884 - - - - - hypoxia up-regulated 1 [Source:NCBI gene;Acc:428251]
81. TMEM39B ENSGALG00000003287 4125 0.884 - - - - 0.884 - - - - - transmembrane protein 39B [Source:NCBI gene;Acc:419650]
82. MED1 ENSGALG00000001708 9556 0.884 - - - - 0.884 - - - - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
83. WHSC1L1 4065 0.882 - - - - 0.882 - - - - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X8
84. C15H12ORF49 C15H12ORF49 13250 0.882 - - - - 0.882 - - - - -
85. RAE1 ENSGALG00000007653 8930 0.882 - - - - 0.882 - - - - - ribonucleic acid export 1 [Source:NCBI gene;Acc:419324]
86. USP1 ENSGALG00000010957 8297 0.882 - - - - 0.882 - - - - - ubiquitin specific peptidase 1 [Source:NCBI gene;Acc:424685]
87. MRPL46 ENSGALG00000006782 5033 0.882 - - - - 0.882 - - - - - mitochondrial ribosomal protein L46 [Source:NCBI gene;Acc:415499]
88. IBA57 ENSGALG00000005328 4362 0.881 - - - - 0.881 - - - - - IBA57 homolog, iron-sulfur cluster assembly [Source:NCBI gene;Acc:420396]
89. EPB41L1 ENSGALG00000034171 3616 0.881 - - - - 0.881 - - - - - erythrocyte membrane protein band 4.1 like 1 [Source:HGNC Symbol;Acc:HGNC:3378]
90. KCTD9 ENSGALG00000000275 3455 0.881 - - - - 0.881 - - - - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
91. BCL9 ENSGALG00000037655 4620 0.881 - - - - 0.881 - - - - - B cell CLL/lymphoma 9 [Source:HGNC Symbol;Acc:HGNC:1008]
92. CCDC59 ENSGALG00000028648 9272 0.88 - - - - 0.880 - - - - - coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]
93. VPS8 ENSGALG00000006704 5419 0.88 - - - - 0.880 - - - - - VPS8, CORVET complex subunit [Source:HGNC Symbol;Acc:HGNC:29122]
94. ESRP2 ENSGALG00000003374 4436 0.879 - - - - 0.879 - - - - - epithelial splicing regulatory protein 2 [Source:NCBI gene;Acc:415710]
95. AGPAT3 ENSGALG00000031932 6903 0.879 - - - - 0.879 - - - - - 1-acylglycerol-3-phosphate O-acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:326]
96. TBC1D7 ENSGALG00000012731 4891 0.879 - - - - 0.879 - - - - - TBC1 domain family member 7 [Source:HGNC Symbol;Acc:HGNC:21066]
97. DNAJC2 ENSGALG00000008249 28064 0.879 - - - - 0.879 - - - - - DnaJ heat shock protein family (Hsp40) member C2 [Source:NCBI gene;Acc:417717]
98. TBRG4 ENSGALG00000038102 9269 0.879 - - - - 0.879 - - - - - transforming growth factor beta regulator 4 [Source:HGNC Symbol;Acc:HGNC:17443]
99. HMGB3 ENSGALG00000009071 12011 0.878 - - - - 0.878 - - - - - high mobility group box 3 [Source:NCBI gene;Acc:396232]
100. PGAM5 ENSGALG00000002137 7700 0.876 - - - - 0.876 - - - - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]

There are 130 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA