Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PITX1

Gene Name Gene ID Reads Annotation
PITX1 ENSGALG00000030237 842 paired like homeodomain 1 [Source:NCBI gene;Acc:374201]











Genes with expression patterns similar to PITX1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PITX1 ENSGALG00000030237 842 8 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 - 1.000 paired like homeodomain 1 [Source:NCBI gene;Acc:374201]
2. MASP2 ENSGALG00000003016 35 1.634 - - - - 0.878 - - - - 0.756 mannan binding lectin serine peptidase 2 [Source:NCBI gene;Acc:407089]
3. GPR132 ENSGALG00000027407 9 0.949 - - - - 0.949 - - - - - G protein-coupled receptor 132, transcript variant X2
4. ENSGALG00000018879 ENSGALG00000018879 9 0.949 - - - - 0.949 - - - - -
5. BRD8 ENSGALG00000037646 100 0.949 - - - - 0.949 - - - - - bromodomain containing 8 [Source:NCBI gene;Acc:416219]
6. IRF-4 IRF-4 19 0.948 - - - - 0.948 - - - - -
7. SRRD ENSGALG00000005614 234 0.947 - - - - 0.947 - - - - - SRR1 domain containing [Source:NCBI gene;Acc:416908]
8. RAB4A ENSGALG00000036218 20 0.934 - - - - 0.934 - - - - - RAB4A, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9781]
9. LRRC72 9 0.933 - - - - 0.933 - - - - - leucine rich repeat containing 72, transcript variant X4
10. GCNT7 ENSGALG00000007717 11 0.93 - - - - 0.930 - - - - - glucosaminyl (N-acetyl) transferase family member 7 [Source:HGNC Symbol;Acc:HGNC:16099]
11. LOC416530 ENSGALG00000005291 207 0.918 - - - - 0.918 - - - - - uncharacterized LOC416530, transcript variant X1
12. GALNT11 ENSGALG00000006233 210 0.915 - - - - 0.915 - - - - - polypeptide N-acetylgalactosaminyltransferase 11 [Source:HGNC Symbol;Acc:HGNC:19875]
13. STXBP5L ENSGALG00000032361 41 0.915 - - - - 0.915 - - - - - syntaxin binding protein 5 like [Source:HGNC Symbol;Acc:HGNC:30757]
14. CCDC113 20 0.909 - - - - 0.909 - - - - - coiled-coil domain containing 113, transcript variant X2
15. KSR1 ENSGALG00000005685 78 0.903 - - - - 0.903 - - - - - kinase suppressor of ras 1 [Source:HGNC Symbol;Acc:HGNC:6465]
16. LRRC10 ENSGALG00000009976 318 0.903 - - - - 0.903 - - - - - leucine rich repeat containing 10 [Source:HGNC Symbol;Acc:HGNC:20264]
17. XPNPEP2 ENSGALG00000025935 57 0.891 - - - - 0.891 - - - - - X-prolyl aminopeptidase 2 [Source:HGNC Symbol;Acc:HGNC:12823]
18. PIK3R3 ENSGALG00000010335 374 0.889 - - - - 0.889 - - - - - phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
19. TSPAN1 106 0.884 - - - - 0.884 - - - - - tetraspanin 1
20. ZDHHC5 ENSGALG00000007362 296 0.873 - - - - 0.873 - - - - - zinc finger DHHC-type containing 5 [Source:NCBI gene;Acc:423130]
21. MCOLN3 ENSGALG00000008709 21 0.867 - - - - 0.867 - - - - - mucolipin 3 [Source:HGNC Symbol;Acc:HGNC:13358]
22. SLC35D3 ENSGALG00000030545 55 0.866 - - - - 0.866 - - - - - solute carrier family 35 member D3 [Source:HGNC Symbol;Acc:HGNC:15621]
23. NHEJ1 ENSGALG00000011335 334 0.859 - - - - 0.859 - - - - - non-homologous end joining factor 1, transcript variant X3
24. LARP6 ENSGALG00000004046 97 0.855 - - - - 0.855 - - - - - La ribonucleoprotein domain family member 6 [Source:HGNC Symbol;Acc:HGNC:24012]
25. SDSL ENSGALG00000008317 55 0.853 - - - - 0.853 - - - - - serine dehydratase like [Source:NCBI gene;Acc:417030]
26. CHD5 ENSGALG00000000747 365 0.852 - - - - 0.852 - - - - - chromodomain helicase DNA binding protein 5, transcript variant X17
27. PCDH20 ENSGALG00000016934 187 0.851 - - - - 0.851 - - - - - protocadherin 20
28. UBE2Z ENSGALG00000001315 103 0.845 - - - - 0.845 - - - - - ubiquitin conjugating enzyme E2 Z [Source:HGNC Symbol;Acc:HGNC:25847]
29. ENSGALG00000026351 ENSGALG00000026351 49 0.843 - - - - - - 0.843 - - -
30. PDE3B ENSGALG00000006035 3732 0.834 - - - - - - - 0.834 - - phosphodiesterase 3B [Source:NCBI gene;Acc:423064]
31. C1orf53 304 0.829 - - - - 0.829 - - - - - chromosome 1 open reading frame 53, transcript variant X3
32. LIMS1 ENSGALG00000029970 7244 0.828 - - - - - - - 0.828 - - LIM zinc finger domain containing 1 [Source:NCBI gene;Acc:414880]
33. MED27 ENSGALG00000003683 6808 0.826 - - - - - - - 0.826 - - mediator complex subunit 27 [Source:NCBI gene;Acc:417172]
34. RBM12B ENSGALG00000035129 4314 0.826 - - - - - - - 0.826 - - RNA binding motif protein 12B [Source:NCBI gene;Acc:420223]
35. CKLF ENSGALG00000005254 3365 0.821 - - - - - - - 0.821 - - chemokine like factor [Source:HGNC Symbol;Acc:HGNC:13253]
36. FASTKD3 ENSGALG00000033521 1186 0.816 - - - - 0.816 - - - - - FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
37. CREPT CREPT 17142 0.816 - - - - - - - 0.816 - -
38. RCAN3 ENSGALG00000004282 7778 0.815 - - - - - - - 0.815 - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
39. BCAS3 ENSGALG00000005295 2595 0.814 - - - - - - - 0.814 - - BCAS3, microtubule associated cell migration factor [Source:HGNC Symbol;Acc:HGNC:14347]
40. ACBD5 ENSGALG00000007519 1646 0.81 - - - - - - - 0.810 - - acyl-CoA binding domain containing 5 [Source:NCBI gene;Acc:420488]
41. Sep-06 Sep-06 5961 0.81 - - - - - - - 0.810 - -
42. KIAA0430 268 0.808 - - - - 0.808 - - - - - KIAA0430, transcript variant X4
43. SNX12 ENSGALG00000005659 9503 0.807 - - - - - - - 0.807 - - sorting nexin 12 [Source:NCBI gene;Acc:428704]
44. ACSS1 ENSGALG00000008632 397 0.806 - - - - 0.806 - - - - - acyl-CoA synthetase short chain family member 1 [Source:HGNC Symbol;Acc:HGNC:16091]
45. GTPBP4 ENSGALG00000006703 16183 0.802 - - - - - - - 0.802 - - GTP binding protein 4 [Source:NCBI gene;Acc:420458]
46. WDR66 ENSGALG00000004365 70 0.802 - - - - 0.802 - - - - - WD repeat domain 66 [Source:HGNC Symbol;Acc:HGNC:28506]
47. CUX1_1 ENSGALG00000021636 3705 0.802 - - - - - - - 0.802 - - cut like homeobox 1 [Source:NCBI gene;Acc:101749861]
48. TRAPPC3 ENSGALG00000002284 23302 0.8 - - - - - - - 0.800 - - trafficking protein particle complex 3 [Source:NCBI gene;Acc:419625]
49. STOML2 STOML2 15566 0.8 - - - - - - - 0.800 - -
50. NEU2 ENSGALG00000037467 34 0.799 - - - - - - - - - 0.799 neuraminidase 2 [Source:HGNC Symbol;Acc:HGNC:7759]
51. AIP ENSGALG00000040247 4166 0.795 - - - - - - - 0.795 - - aryl hydrocarbon receptor interacting protein [Source:NCBI gene;Acc:395123]
52. GPALPP1 ENSGALG00000031567 4221 0.794 - - - - - - - 0.794 - - GPALPP motifs containing 1 [Source:NCBI gene;Acc:418842]
53. MYO3A ENSGALG00000007647 643 0.794 - - - - 0.794 - - - - - myosin IIIA [Source:HGNC Symbol;Acc:HGNC:7601]
54. UPF1 ENSGALG00000003220 9496 0.793 - - - - - - - 0.793 - - UPF1, RNA helicase and ATPase [Source:HGNC Symbol;Acc:HGNC:9962]
55. PNN ENSGALG00000010167 6417 0.793 - - - - - - - 0.793 - - pinin, desmosome associated protein [Source:HGNC Symbol;Acc:HGNC:9162]
56. FBXO7 ENSGALG00000012569 4124 0.792 - - - - - - - 0.792 - - F-box protein 7 [Source:NCBI gene;Acc:418063]
57. LMF1 ENSGALG00000044187 2630 0.791 - - - - 0.791 - - - - - lipase maturation factor 1 [Source:HGNC Symbol;Acc:HGNC:14154]
58. ANKRD12 ENSGALG00000008399 1724 0.79 - - - - 0.790 - - - - - ankyrin repeat domain 12 [Source:HGNC Symbol;Acc:HGNC:29135]
59. ADAMTS9 ENSGALG00000041750 1291 0.789 - - - - 0.789 - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 9 [Source:HGNC Symbol;Acc:HGNC:13202]
60. IQCE ENSGALG00000004329 442 0.788 - - - - 0.788 - - - - - IQ motif containing E, transcript variant X1
61. RNLS ENSGALG00000029829 132 0.787 - - - - 0.787 - - - - - renalase, FAD-dependent amine oxidase [Source:NCBI gene;Acc:423674]
62. FAM237A ENSGALG00000020836 21 0.786 - - - - 0.786 - - - - - family with sequence similarity 237 member A [Source:HGNC Symbol;Acc:HGNC:52388]
63. PDLIM5 ENSGALG00000012211 3064 0.785 - - - - - - - 0.785 - - PDZ and LIM domain 5 [Source:NCBI gene;Acc:422699]
64. NT5C3B ENSGALG00000003651 5190 0.784 - - - - - - - 0.784 - - 5'-nucleotidase, cytosolic IIIB [Source:NCBI gene;Acc:420034]
65. GLT8D1 ENSGALG00000001642 4232 0.783 - - - - - - - 0.783 - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
66. MKL2 186 0.782 - - - - 0.782 - - - - - MKL1/myocardin like 2, transcript variant X4
67. ALAS1 3660 0.781 - - - - - - - 0.781 - - 5'-aminolevulinate synthase 1, transcript variant X1
68. PLOD1 ENSGALG00000004531 8256 0.78 - - - - - - - 0.780 - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 [Source:NCBI gene;Acc:419485]
69. TBC1D9 ENSGALG00000009855 658 0.776 - - - - 0.776 - - - - - TBC1 domain family member 9 [Source:HGNC Symbol;Acc:HGNC:21710]
70. MARS2 ENSGALG00000004019 1881 0.776 - - - - 0.776 - - - - - methionyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25133]
71. IBTK ENSGALG00000015864 3154 0.775 - - - - - - - 0.775 - - inhibitor of Bruton tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:17853]
72. RNF185 ENSGALG00000006960 5428 0.774 - - - - - - - 0.774 - - ring finger protein 185 [Source:NCBI gene;Acc:416965]
73. TTC38 ENSGALG00000014551 1135 0.772 - - - - - - - 0.772 - - tetratricopeptide repeat domain 38 [Source:HGNC Symbol;Acc:HGNC:26082]
74. USP37 ENSGALG00000011427 280 0.772 - - - - 0.772 - - - - - ubiquitin specific peptidase 37 [Source:NCBI gene;Acc:424216]
75. DOCK10 ENSGALG00000005030 848 0.771 - - - - - - - 0.771 - - dedicator of cytokinesis 10 [Source:HGNC Symbol;Acc:HGNC:23479]
76. MTIF2 ENSGALG00000031265 2366 0.77 - - - - - - - 0.770 - - mitochondrial translational initiation factor 2 [Source:NCBI gene;Acc:421213]
77. TAF1A ENSGALG00000009441 2431 0.769 - - - - - - - 0.769 - - TATA-box binding protein associated factor, RNA polymerase I subunit A [Source:NCBI gene;Acc:421338]
78. FBXL17 ENSGALG00000000276 2443 0.769 - - - - - - - 0.769 - - F-box and leucine rich repeat protein 17 [Source:HGNC Symbol;Acc:HGNC:13615]
79. BRCA1 ENSGALG00000002781 2052 0.767 - - - - - - - 0.767 - - BRCA1, DNA repair associated [Source:NCBI gene;Acc:373983]
80. NCAPH ENSGALG00000032270 2103 0.762 - - - - - - - 0.762 - - non-SMC condensin I complex subunit H [Source:NCBI gene;Acc:425304]
81. TAF5 ENSGALG00000008241 5227 0.761 - - - - - - - 0.761 - - TATA-box binding protein associated factor 5 [Source:NCBI gene;Acc:423872]
82. CLMP ENSGALG00000006507 8079 0.761 - - - - - - - 0.761 - - CXADR like membrane protein [Source:HGNC Symbol;Acc:HGNC:24039]
83. TMUB1 ENSGALG00000036361 4686 0.76 - - - - 0.760 - - - - - transmembrane and ubiquitin like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21709]
84. UBIAD1 ENSGALG00000003358 4675 0.76 - - - - - - - 0.760 - - UbiA prenyltransferase domain containing 1 [Source:NCBI gene;Acc:419456]
85. TICAM1 ENSGALG00000026850 723 0.76 - - - - - - - 0.760 - - toll like receptor adaptor molecule 1 [Source:NCBI gene;Acc:100008585]
86. EVI2A ENSGALG00000039084 13 0.76 - - - - - - 0.760 - - - ecotropic viral integration site 2A [Source:NCBI gene;Acc:776037]
87. ATP6V0A2 ENSGALG00000003194 4824 0.759 - - - - - - - 0.759 - - ATPase H+ transporting V0 subunit a2 [Source:NCBI gene;Acc:395473]
88. NBEA 1982 0.759 - - - - - - - 0.759 - - neurobeachin, transcript variant X10
89. HDAC1 ENSGALG00000003297 3528 0.758 - - - - - - - 0.758 - - histone deacetylase 1 [Source:NCBI gene;Acc:373961]
90. C5H15ORF41 C5H15ORF41 2114 0.758 - - - - 0.758 - - - - -
91. ATP1B3 ENSGALG00000002764 1890 0.757 - - - - - - - 0.757 - - ATPase Na+/K+ transporting subunit beta 3 [Source:NCBI gene;Acc:396549]
92. PANK3 ENSGALG00000001895 11 0.756 - - - - - - - - - 0.756 pantothenate kinase 3 [Source:HGNC Symbol;Acc:HGNC:19365]
93. CCR8 ENSGALG00000038069 6 0.756 - - - - - - - - - 0.756 C-C motif chemokine receptor 8 [Source:NCBI gene;Acc:420718]
94. VSIG4 1 0.756 - - - - - - - - - 0.756 V-set and immunoglobulin domain containing 4, transcript variant X3
95. ENSGALG00000011273 ENSGALG00000011273 9 0.756 - - - - - - - - - 0.756
96. OMD ENSGALG00000026080 3 0.756 - - - - - - - - - 0.756 osteomodulin [Source:HGNC Symbol;Acc:HGNC:8134]
97. KCNH5 ENSGALG00000011858 24 0.756 - - - - - - - - - 0.756 potassium voltage-gated channel subfamily H member 5 [Source:HGNC Symbol;Acc:HGNC:6254]
98. ENSGALG00000002367 ENSGALG00000002367 10 0.756 - - - - - - - - - 0.756
99. VPS37D 3 0.756 - - - - - - - - - 0.756 VPS37D, ESCRT-I subunit
100. HTR1F ENSGALG00000015494 7 0.756 - - - - - - - - - 0.756 5-hydroxytryptamine receptor 1F [Source:HGNC Symbol;Acc:HGNC:5292]

There are 116 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA