Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PHTF1

Gene Name Gene ID Reads Annotation
PHTF1 ENSGALG00000001845 3276 putative homeodomain transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:8939]











Genes with expression patterns similar to PHTF1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PHTF1 ENSGALG00000001845 3276 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 putative homeodomain transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:8939]
2. MED8 ENSGALG00000009993 3095 2.436 - - - 0.728 0.996 - - 0.712 - - mediator complex subunit 8 [Source:NCBI gene;Acc:424565]
3. PRDM4 ENSGALG00000012619 876 1.856 - - - 0.862 0.994 - - - - - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
4. YARS ENSGALG00000003563 11093 1.825 - - - 0.831 0.994 - - - - - tyrosyl-tRNA synthetase [Source:NCBI gene;Acc:419666]
5. TM9SF3 ENSGALG00000005534 15290 1.741 - - - 0.791 0.950 - - - - - transmembrane 9 superfamily member 3
6. PITHD1 ENSGALG00000003986 11470 1.729 - - - 0.739 0.990 - - - - - PITH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25022]
7. TIMMDC1 ENSGALG00000024480 9337 1.711 - - - - 0.985 - - 0.726 - - translocase of inner mitochondrial membrane domain containing 1 [Source:NCBI gene;Acc:418453]
8. NEK6 ENSGALG00000001118 20333 1.708 - - - - 0.967 - 0.741 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
9. UTP18 ENSGALG00000002985 7129 1.578 - - - 0.849 - - - 0.729 - - UTP18, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]
10. AAMP ENSGALG00000011445 2528 1.509 - - - 0.805 - - 0.704 - - - angio associated migratory cell protein [Source:NCBI gene;Acc:769880]
11. C18orf8 C18orf8 1512 1.507 - - - 0.792 - - 0.715 - - -
12. ZNF622 ENSGALG00000037171 5706 1.485 - - - 0.729 - - - 0.756 - - zinc finger protein 622 [Source:NCBI gene;Acc:373921]
13. ATG16L1 ENSGALG00000001619 3562 1.48 - - - 0.741 0.739 - - - - - autophagy related 16 like 1 [Source:HGNC Symbol;Acc:HGNC:21498]
14. CCDC134 ENSGALG00000011918 6994 1.478 - - - 0.717 - - - 0.761 - - coiled-coil domain containing 134 [Source:HGNC Symbol;Acc:HGNC:26185]
15. MRPL55 5995 1.435 - - - 0.727 - - - 0.708 - - mitochondrial ribosomal protein L55
16. PREP2 PREP2 238 0.996 - - - - 0.996 - - - - -
17. RAMP3 ENSGALG00000037246 1187 0.995 - - - - 0.995 - - - - - receptor activity modifying protein 3 [Source:NCBI gene;Acc:420786]
18. BRF1 ENSGALG00000011705 3406 0.995 - - - - 0.995 - - - - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
19. SMG7 ENSGALG00000004667 707 0.995 - - - - 0.995 - - - - - SMG7, nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]
20. PTK2B ENSGALG00000016564 406 0.995 - - - - 0.995 - - - - - protein tyrosine kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:9612]
21. GTF2H1 ENSGALG00000042340 1553 0.995 - - - - 0.995 - - - - - general transcription factor IIH subunit 1 [Source:NCBI gene;Acc:423081]
22. ANKRD9 ENSGALG00000011376 525 0.995 - - - - 0.995 - - - - - ankyrin repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20096]
23. SDCBP ENSGALG00000015436 1228 0.994 - - - - 0.994 - - - - - syndecan binding protein [Source:NCBI gene;Acc:421136]
24. RBM6 ENSGALG00000035578 1690 0.994 - - - - 0.994 - - - - - RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]
25. LZIC ENSGALG00000002616 9052 0.994 - - - - 0.994 - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
26. ASAP2 ENSGALG00000016419 1393 0.994 - - - - 0.994 - - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
27. BAHD1 ENSGALG00000033675 1779 0.993 - - - - 0.993 - - - - - bromo adjacent homology domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29153]
28. TMF1 ENSGALG00000013408 3344 0.992 - - - - 0.992 - - - - - TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]
29. ENSGALG00000006569 ENSGALG00000006569 2169 0.992 - - - - 0.992 - - - - -
30. KIF11 ENSGALG00000030597 5528 0.991 - - - - 0.991 - - - - - kinesin family member 11 [Source:NCBI gene;Acc:423809]
31. RBM34 ENSGALG00000029915 5618 0.991 - - - - 0.991 - - - - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
32. ETS1 ENSGALG00000001143 7284 0.991 - - - - 0.991 - - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:NCBI gene;Acc:396235]
33. NDUFV1 ENSGALG00000042809 6222 0.991 - - - - 0.991 - - - - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:NCBI gene;Acc:430210]
34. SYNE1 ENSGALG00000013505 2324 0.991 - - - - 0.991 - - - - - spectrin repeat containing, nuclear envelope 1, transcript variant X3
35. SAP30 ENSGALG00000036252 2032 0.99 - - - - 0.990 - - - - - Sin3A associated protein 30 [Source:HGNC Symbol;Acc:HGNC:10532]
36. C9orf85 ENSGALG00000026001 4110 0.99 - - - - 0.990 - - - - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
37. IARS2 ENSGALG00000009566 4599 0.99 - - - - 0.990 - - - - - isoleucyl-tRNA synthetase 2, mitochondrial [Source:NCBI gene;Acc:421346]
38. COQ5 ENSGALG00000007185 5614 0.99 - - - - 0.990 - - - - - coenzyme Q5, methyltransferase [Source:NCBI gene;Acc:416975]
39. FNDC5 ENSGALG00000003567 3328 0.99 - - - - 0.990 - - - - - Gallus gallus fibronectin type III domain containing 5 (FNDC5), mRNA. [Source:RefSeq mRNA;Acc:NM_001318986]
40. MRPL16 ENSGALG00000029419 8033 0.99 - - - - 0.990 - - - - - mitochondrial ribosomal protein L16 [Source:HGNC Symbol;Acc:HGNC:14476]
41. SNX14 ENSGALG00000015831 2554 0.99 - - - - 0.990 - - - - - sorting nexin 14 [Source:NCBI gene;Acc:421832]
42. RAD54B ENSGALG00000043597 1699 0.989 - - - - 0.989 - - - - - RAD54 homolog B [Source:NCBI gene;Acc:395449]
43. LOC426385 ENSGALG00000026301 2703 0.989 - - - - 0.989 - - - - - serine/threonine kinase 35-like, transcript variant X2
44. RALGDS ENSGALG00000003412 4478 0.989 - - - - 0.989 - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
45. STARD3NL ENSGALG00000033038 4851 0.988 - - - - 0.988 - - - - - STARD3 N-terminal like [Source:HGNC Symbol;Acc:HGNC:19169]
46. PSMG3 ENSGALG00000004203 11240 0.987 - - - - 0.987 - - - - - proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
47. HSF2 ENSGALG00000038420 5259 0.987 - - - - 0.987 - - - - - heat shock transcription factor 2 [Source:NCBI gene;Acc:421724]
48. WDR92 ENSGALG00000008760 3934 0.987 - - - - 0.987 - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
49. LMAN2 ENSGALG00000033232 11740 0.986 - - - - 0.986 - - - - - lectin, mannose binding 2 [Source:HGNC Symbol;Acc:HGNC:16986]
50. WNK2 ENSGALG00000038850 4712 0.986 - - - - 0.986 - - - - - WNK lysine deficient protein kinase 2 [Source:HGNC Symbol;Acc:HGNC:14542]
51. DLL1 ENSGALG00000011182 1613 0.986 - - - - 0.986 - - - - - delta like canonical Notch ligand 1 [Source:NCBI gene;Acc:395820]
52. CDKN1B ENSGALG00000022980 4606 0.986 - - - - 0.986 - - - - - cyclin dependent kinase inhibitor 1B [Source:NCBI gene;Acc:374106]
53. ENSGALG00000027854 ENSGALG00000027854 5007 0.986 - - - - 0.986 - - - - -
54. TSPO2 ENSGALG00000003212 5141 0.985 - - - - 0.985 - - - - - translocator protein 2 [Source:HGNC Symbol;Acc:HGNC:21256]
55. EDNRA ENSGALG00000010013 2472 0.985 - - - - 0.985 - - - - - endothelin receptor type A [Source:NCBI gene;Acc:373908]
56. MED21 ENSGALG00000027435 5766 0.985 - - - - 0.985 - - - - - mediator complex subunit 21 [Source:HGNC Symbol;Acc:HGNC:11473]
57. DGKZ ENSGALG00000008380 5389 0.985 - - - - 0.985 - - - - - diacylglycerol kinase zeta [Source:NCBI gene;Acc:423197]
58. MARC1 ENSGALG00000009453 5675 0.985 - - - - 0.985 - - - - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
59. PBRM1 ENSGALG00000037455 6450 0.984 - - - - 0.984 - - - - - polybromo 1 [Source:NCBI gene;Acc:396074]
60. UTP6 ENSGALG00000003260 4909 0.984 - - - - 0.984 - - - - - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
61. SFXN5 ENSGALG00000016094 2678 0.982 - - - - 0.982 - - - - - sideroflexin 5 [Source:HGNC Symbol;Acc:HGNC:16073]
62. MEF2BNB MEF2BNB 5578 0.981 - - - - 0.981 - - - - -
63. MYBL2 ENSGALG00000003503 15875 0.98 - - - - 0.980 - - - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
64. RHOT1 ENSGALG00000003397 5149 0.978 - - - - 0.978 - - - - - ras homolog family member T1 [Source:NCBI gene;Acc:417410]
65. HARS ENSGALG00000035080 11602 0.978 - - - - 0.978 - - - - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
66. UPF3B ENSGALG00000008618 12350 0.978 - - - - 0.978 - - - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
67. CDH3 5050 0.978 - - - - 0.978 - - - - - cadherin 3
68. DLD ENSGALG00000007931 11011 0.977 - - - - 0.977 - - - - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
69. FUNDC2 ENSGALG00000029585 9334 0.977 - - - - 0.977 - - - - - FUN14 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24925]
70. SH3BGR ENSGALG00000016127 2561 0.976 - - - - 0.976 - - - - - SH3 domain binding glutamate rich protein
71. CCDC132 CCDC132 2632 0.976 - - - - 0.976 - - - - -
72. CDCA7 ENSGALG00000040833 7484 0.976 - - - - 0.976 - - - - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
73. ACAT2 ENSGALG00000011659 12825 0.976 - - - - 0.976 - - - - - acetyl-CoA acetyltransferase 2 [Source:NCBI gene;Acc:421587]
74. LGMN ENSGALG00000010811 7401 0.976 - - - - 0.976 - - - - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]
75. DENR ENSGALG00000003795 30805 0.973 - - - - 0.973 - - - - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
76. TAF3 ENSGALG00000006731 15569 0.973 - - - - 0.973 - - - - - TATA-box binding protein associated factor 3 [Source:NCBI gene;Acc:419107]
77. SLMO2 SLMO2 9207 0.973 - - - - 0.973 - - - - -
78. SPRED1 ENSGALG00000028203 6520 0.972 - - - - 0.972 - - - - - sprouty related EVH1 domain containing 1 [Source:NCBI gene;Acc:423292]
79. LGALS1 ENSGALG00000012420 13993 0.972 - - - - 0.972 - - - - - galectin 1 [Source:NCBI gene;Acc:396491]
80. NUP88 ENSGALG00000032280 9847 0.971 - - - - 0.971 - - - - - nucleoporin 88 [Source:HGNC Symbol;Acc:HGNC:8067]
81. PSMD3 ENSGALG00000033162 25615 0.97 - - - - 0.970 - - - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
82. MYO9A ENSGALG00000033618 4505 0.97 - - - - 0.970 - - - - - myosin IXA, transcript variant X10
83. PRCC ENSGALG00000040696 9346 0.968 - - - - 0.968 - - - - - proline rich mitotic checkpoint control factor [Source:HGNC Symbol;Acc:HGNC:9343]
84. SLC30A4 ENSGALG00000005703 5696 0.967 - - - - 0.967 - - - - - solute carrier family 30 member 4 [Source:NCBI gene;Acc:415444]
85. ZC3H6 ENSGALG00000008269 10353 0.966 - - - - 0.966 - - - - - zinc finger CCCH-type containing 6 [Source:NCBI gene;Acc:421230]
86. GATC ENSGALG00000007195 8610 0.966 - - - - 0.966 - - - - - glutamyl-tRNA amidotransferase subunit C, transcript variant X2
87. SPEN ENSGALG00000036932 9688 0.965 - - - - 0.965 - - - - - spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]
88. SRGAP1 ENSGALG00000009825 6753 0.964 - - - - 0.964 - - - - - SLIT-ROBO Rho GTPase activating protein 1 [Source:NCBI gene;Acc:417821]
89. SRP19 ENSGALG00000000218 14207 0.962 - - - - 0.962 - - - - - signal recognition particle 19 [Source:HGNC Symbol;Acc:HGNC:11300]
90. VMA21 ENSGALG00000009065 6432 0.957 - - - - 0.957 - - - - - VMA21, vacuolar ATPase assembly factor [Source:NCBI gene;Acc:422385]
91. ZYX ENSGALG00000014688 8686 0.956 - - - - 0.956 - - - - - zyxin [Source:NCBI gene;Acc:418300]
92. HDAC8 ENSGALG00000004825 12066 0.956 - - - - 0.956 - - - - - histone deacetylase 8, transcript variant X2
93. Mar-05 Mar-05 6330 0.955 - - - - 0.955 - - - - -
94. BHMT ENSGALG00000004518 4700 0.955 - - - - 0.955 - - - - - betaine--homocysteine S-methyltransferase
95. PRKCI ENSGALG00000009364 11574 0.953 - - - - 0.953 - - - - - protein kinase C iota [Source:NCBI gene;Acc:424991]
96. CENPP ENSGALG00000004687 6707 0.949 - - - - 0.949 - - - - - centromere protein P [Source:NCBI gene;Acc:415952]
97. NDUFS4 ENSGALG00000028026 25876 0.946 - - - - 0.946 - - - - - NADH:ubiquinone oxidoreductase subunit S4 [Source:HGNC Symbol;Acc:HGNC:7711]
98. RPL22 ENSGALG00000000719 74238 0.946 - - - - 0.946 - - - - - ribosomal protein L22 [Source:NCBI gene;Acc:373937]
99. DNAJC9 ENSGALG00000002701 19249 0.945 - - - - 0.945 - - - - - DnaJ heat shock protein family (Hsp40) member C9 [Source:NCBI gene;Acc:423640]
100. SEPHS1 ENSGALG00000014575 10701 0.943 - - - - 0.943 - - - - - selenophosphate synthetase 1 [Source:NCBI gene;Acc:426612]

There are 394 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA