Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PHF3

Gene Name Gene ID Reads Annotation
PHF3 ENSGALG00000016267 4148 PHD finger protein 3 [Source:HGNC Symbol;Acc:HGNC:8921]











Genes with expression patterns similar to PHF3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PHF3 ENSGALG00000016267 4148 9 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 PHD finger protein 3 [Source:HGNC Symbol;Acc:HGNC:8921]
2. TOP2A ENSGALG00000003922 7726 1.608 0.784 - 0.824 - - - - - - - topoisomerase (DNA) II alpha [Source:NCBI gene;Acc:395570]
3. SRSF11 ENSGALG00000011305 10435 1.543 0.809 - - - - - - 0.734 - - serine and arginine rich splicing factor 11 [Source:NCBI gene;Acc:424714]
4. METTL5 ENSGALG00000009676 3252 1.526 - - 0.755 - - - - 0.771 - - methyltransferase like 5 [Source:HGNC Symbol;Acc:HGNC:25006]
5. SNN ENSGALG00000028876 1687 1.519 - - 0.775 - - - - 0.744 - - stannin [Source:NCBI gene;Acc:416429]
6. TRAF3IP1 ENSGALG00000004236 7094 1.508 - - 0.780 - - - - 0.728 - - TRAF3 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:17861]
7. LBR 6686 1.483 0.724 - 0.759 - - - - - - - lamin B receptor, transcript variant X4
8. TPR ENSGALG00000005105 2924 1.478 0.710 - - - - - - 0.768 - - translocated promoter region, nuclear basket protein [Source:HGNC Symbol;Acc:HGNC:12017]
9. THOC2 ENSGALG00000008507 9501 1.469 0.740 - 0.729 - - - - - - - THO complex 2 [Source:HGNC Symbol;Acc:HGNC:19073]
10. EIF5B ENSGALG00000016764 30681 1.461 0.732 - - - - - - 0.729 - - eukaryotic translation initiation factor 5B [Source:NCBI gene;Acc:395514]
11. ROCK1 ENSGALG00000014922 4020 1.448 - - - - - - 0.735 0.713 - - Rho-associated, coiled-coil containing protein kinase 1 [Source:NCBI gene;Acc:373970]
12. ARVCF ENSGALG00000043373 2041 1.435 0.702 - - - - - - 0.733 - - ARVCF, delta catenin family member [Source:NCBI gene;Acc:395119]
13. SURF6 ENSGALG00000038413 11178 1.43 0.720 - 0.710 - - - - - - - surfeit 6 [Source:NCBI gene;Acc:417160]
14. RBM25 ENSGALG00000009332 10842 1.421 0.707 - 0.714 - - - - - - - RNA binding motif protein 25 [Source:NCBI gene;Acc:423250]
15. DDX46 ENSGALG00000006404 8765 0.845 0.845 - - - - - - - - - DEAD-box helicase 46 [Source:HGNC Symbol;Acc:HGNC:18681]
16. CPOX ENSGALG00000015240 5292 0.844 - - - - - - - 0.844 - - coproporphyrinogen oxidase
17. ABHD13 ENSGALG00000016853 4975 0.835 - - 0.835 - - - - - - - abhydrolase domain containing 13 [Source:NCBI gene;Acc:418763]
18. ZC3H11A ENSGALG00000000541 2712 0.834 - - 0.834 - - - - - - - zinc finger CCCH-type containing 11A [Source:NCBI gene;Acc:421172]
19. CDC5L ENSGALG00000016704 22893 0.832 - - 0.832 - - - - - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
20. MBNL1 ENSGALG00000029190 3953 0.831 - - 0.831 - - - - - - - muscleblind like splicing regulator 1 [Source:NCBI gene;Acc:425033]
21. STRBP ENSGALG00000029927 3516 0.829 - - 0.829 - - - - - - - spermatid perinuclear RNA binding protein [Source:NCBI gene;Acc:417105]
22. MBSP MBSP 5634 0.827 - - 0.827 - - - - - - -
23. ASPG ENSGALG00000011572 4984 0.826 - - - - - - - 0.826 - - asparaginase [Source:HGNC Symbol;Acc:HGNC:20123]
24. CPSF3 ENSGALG00000016424 342 0.82 - - 0.820 - - - - - - - cleavage and polyadenylation specific factor 3 [Source:HGNC Symbol;Acc:HGNC:2326]
25. NF1 ENSGALG00000005660 1610 0.819 - - 0.819 - - - - - - - neurofibromin 1 [Source:HGNC Symbol;Acc:HGNC:7765]
26. AKAP9 ENSGALG00000040724 7446 0.816 0.816 - - - - - - - - - A-kinase anchoring protein 9 [Source:NCBI gene;Acc:395695]
27. SP3 ENSGALG00000031796 8997 0.812 - - 0.812 - - - - - - - Sp3 transcription factor [Source:NCBI gene;Acc:395302]
28. NAP1L1 ENSGALG00000010238 14506 0.811 0.811 - - - - - - - - - nucleosome assembly protein 1 like 1 [Source:HGNC Symbol;Acc:HGNC:7637]
29. SPDL1 ENSGALG00000001942 4403 0.81 - - 0.810 - - - - - - - spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
30. RNF20 ENSGALG00000015548 7199 0.807 - - 0.807 - - - - - - - ring finger protein 20 [Source:NCBI gene;Acc:427310]
31. SLC39A6 ENSGALG00000013209 1754 0.805 - - 0.805 - - - - - - - solute carrier family 39 member 6 [Source:HGNC Symbol;Acc:HGNC:18607]
32. CDCA7L ENSGALG00000035978 2112 0.804 - - 0.804 - - - - - - - cell division cycle associated 7 like [Source:NCBI gene;Acc:420608]
33. MTHFSD ENSGALG00000033322 824 0.802 - - 0.802 - - - - - - - methenyltetrahydrofolate synthetase domain containing [Source:HGNC Symbol;Acc:HGNC:25778]
34. SLK ENSGALG00000008318 2220 0.802 - - 0.802 - - - - - - - STE20 like kinase [Source:HGNC Symbol;Acc:HGNC:11088]
35. CGNL1 ENSGALG00000004294 1177 0.801 - - 0.801 - - - - - - - cingulin like 1 [Source:HGNC Symbol;Acc:HGNC:25931]
36. LARP7 ENSGALG00000012048 8393 0.801 - - 0.801 - - - - - - - La ribonucleoprotein domain family member 7 [Source:HGNC Symbol;Acc:HGNC:24912]
37. WBP4 ENSGALG00000016949 5858 0.798 - - 0.798 - - - - - - - WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
38. ZWILCH ENSGALG00000007736 4939 0.798 - - - - - - - 0.798 - - zwilch kinetochore protein [Source:HGNC Symbol;Acc:HGNC:25468]
39. MYCBP2 ENSGALG00000016915 2374 0.797 - - 0.797 - - - - - - - MYC binding protein 2, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:23386]
40. AGGF1 ENSGALG00000004311 3011 0.797 - - 0.797 - - - - - - - angiogenic factor with G-patch and FHA domains 1, transcript variant X1
41. NLK ENSGALG00000005699 9066 0.795 - - 0.795 - - - - - - - nemo like kinase [Source:HGNC Symbol;Acc:HGNC:29858]
42. ATP10D ENSGALG00000014192 94 0.794 - - 0.794 - - - - - - - ATPase phospholipid transporting 10D (putative) [Source:HGNC Symbol;Acc:HGNC:13549]
43. PDIA5 ENSGALG00000011689 6913 0.793 - - 0.793 - - - - - - - protein disulfide isomerase family A member 5 [Source:HGNC Symbol;Acc:HGNC:24811]
44. TRMT6 ENSGALG00000009169 1431 0.792 - - 0.792 - - - - - - - tRNA methyltransferase 6 [Source:NCBI gene;Acc:421313]
45. TCERG1 ENSGALG00000007528 6346 0.791 0.791 - - - - - - - - - transcription elongation regulator 1 [Source:HGNC Symbol;Acc:HGNC:15630]
46. PRPF40A ENSGALG00000012526 7724 0.791 - - 0.791 - - - - - - - pre-mRNA processing factor 40 homolog A [Source:HGNC Symbol;Acc:HGNC:16463]
47. RALGDS ENSGALG00000003412 4478 0.788 - - 0.788 - - - - - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
48. CCAR1 ENSGALG00000004108 13219 0.788 - - 0.788 - - - - - - - cell division cycle and apoptosis regulator 1 [Source:HGNC Symbol;Acc:HGNC:24236]
49. HINT3 ENSGALG00000044342 5674 0.787 - - 0.787 - - - - - - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
50. ATRX ENSGALG00000007843 34172 0.787 0.787 - - - - - - - - - ATRX, chromatin remodeler [Source:HGNC Symbol;Acc:HGNC:886]
51. PLK2 ENSGALG00000014725 1736 0.786 - - 0.786 - - - - - - - polo like kinase 2 [Source:HGNC Symbol;Acc:HGNC:19699]
52. TWSG1 ENSGALG00000008400 1869 0.786 - - 0.786 - - - - - - - twisted gastrulation BMP signaling modulator 1 [Source:NCBI gene;Acc:374024]
53. RDX ENSGALG00000017153 6734 0.783 0.783 - - - - - - - - - radixin [Source:NCBI gene;Acc:395511]
54. QSER1 ENSGALG00000012030 4490 0.781 - - 0.781 - - - - - - - glutamine and serine rich 1 [Source:NCBI gene;Acc:421599]
55. PPIG ENSGALG00000009839 24114 0.781 0.781 - - - - - - - - - peptidylprolyl isomerase G [Source:HGNC Symbol;Acc:HGNC:14650]
56. DYNC2H1 ENSGALG00000041814 1770 0.781 - - - - - - - 0.781 - - dynein cytoplasmic 2 heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:2962]
57. EEF2 ENSGALG00000033884 62036 0.779 0.779 - - - - - - - - - eukaryotic translation elongation factor 2 [Source:NCBI gene;Acc:396325]
58. ATF7IP ENSGALG00000011814 1571 0.777 - - 0.777 - - - - - - - activating transcription factor 7 interacting protein [Source:NCBI gene;Acc:417966]
59. TMEM57 ENSGALG00000001067 3367 0.777 - - 0.777 - - - - - - - transmembrane protein 57 [Source:NCBI gene;Acc:419590]
60. MED15 ENSGALG00000006430 814 0.777 - - 0.777 - - - - - - - mediator complex subunit 15 [Source:HGNC Symbol;Acc:HGNC:14248]
61. TIAR TIAR 2471 0.777 - - 0.777 - - - - - - -
62. WHSC1 1712 0.776 - - 0.776 - - - - - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
63. SEPHS1 ENSGALG00000014575 10701 0.772 - - 0.772 - - - - - - - selenophosphate synthetase 1 [Source:NCBI gene;Acc:426612]
64. HPS5 ENSGALG00000027716 2466 0.772 - - 0.772 - - - - - - - HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
65. SMC5 ENSGALG00000015118 1799 0.772 - - 0.772 - - - - - - - structural maintenance of chromosomes 5 [Source:NCBI gene;Acc:431608]
66. PSIP1 ENSGALG00000015105 8322 0.771 - - - - - - - 0.771 - - PC4 and SFRS1 interacting protein 1 [Source:NCBI gene;Acc:431605]
67. IWS1 ENSGALG00000001803 2305 0.771 - - 0.771 - - - - - - - IWS1, SUPT6H interacting protein [Source:HGNC Symbol;Acc:HGNC:25467]
68. LCMT1 ENSGALG00000005973 1300 0.771 - - 0.771 - - - - - - - leucine carboxyl methyltransferase 1 [Source:NCBI gene;Acc:416565]
69. BBX ENSGALG00000015353 1281 0.77 - - 0.770 - - - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
70. PCTP ENSGALG00000003099 5851 0.77 - - - - - - - 0.770 - - phosphatidylcholine transfer protein [Source:HGNC Symbol;Acc:HGNC:8752]
71. EAPP ENSGALG00000010007 5080 0.769 - - 0.769 - - - - - - - E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
72. SETD3 ENSGALG00000034802 4125 0.769 - - - - - - - 0.769 - - SET domain containing 3 [Source:NCBI gene;Acc:423445]
73. MFAP1 ENSGALG00000028295 6043 0.769 - - - - - - - 0.769 - - microfibrillar associated protein 1 [Source:NCBI gene;Acc:415586]
74. CNTRL ENSGALG00000001513 1773 0.767 - - 0.767 - - - - - - - centriolin [Source:NCBI gene;Acc:417121]
75. BOD1L1 ENSGALG00000026470 9250 0.767 0.767 - - - - - - - - - biorientation of chromosomes in cell division 1 like 1 [Source:HGNC Symbol;Acc:HGNC:31792]
76. SMARCAD1 ENSGALG00000037339 149 0.767 - - 0.767 - - - - - - - SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 [Source:HGNC Symbol;Acc:HGNC:18398]
77. KNOP1 ENSGALG00000002042 6251 0.766 0.766 - - - - - - - - - lysine-rich nucleolar protein 1, transcript variant X1
78. C18orf8 C18orf8 1512 0.766 - - 0.766 - - - - - - -
79. LGR4 ENSGALG00000040834 5529 0.765 - - 0.765 - - - - - - - leucine rich repeat containing G protein-coupled receptor 4 [Source:HGNC Symbol;Acc:HGNC:13299]
80. NEMF ENSGALG00000012263 2250 0.765 - - 0.765 - - - - - - - nuclear export mediator factor [Source:NCBI gene;Acc:428926]
81. PPAP2A PPAP2A 1263 0.764 - - - - - - - 0.764 - -
82. TUBGCP3 ENSGALG00000016836 332 0.764 - - 0.764 - - - - - - - tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]
83. TMOD3 ENSGALG00000004710 2820 0.764 - - 0.764 - - - - - - - tropomodulin 3 [Source:NCBI gene;Acc:415421]
84. MRPS33 ENSGALG00000028879 17966 0.764 - - 0.764 - - - - - - - mitochondrial ribosomal protein S33 [Source:NCBI gene;Acc:418119]
85. AVENAII AVENAII 4552 0.764 - - 0.764 - - - - - - -
86. ABCC3 ENSGALG00000007522 340 0.764 - - 0.764 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
87. PRPF38B ENSGALG00000001972 2009 0.762 - - 0.762 - - - - - - - pre-mRNA processing factor 38B
88. SAT1 ENSGALG00000016348 8469 0.76 - - - - - - - 0.760 - - spermidine/spermine N1-acetyltransferase 1 [Source:NCBI gene;Acc:374006]
89. ABCE1 ENSGALG00000009961 958 0.759 - - 0.759 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
90. CLCN3 ENSGALG00000009674 3704 0.758 - - - - - - - 0.758 - - chloride voltage-gated channel 3 [Source:HGNC Symbol;Acc:HGNC:2021]
91. UBN1 ENSGALG00000031416 2848 0.758 - - 0.758 - - - - - - - ubinuclein 1 [Source:NCBI gene;Acc:416398]
92. AKT3 ENSGALG00000034081 866 0.757 - - 0.757 - - - - - - - AKT serine/threonine kinase 3 [Source:HGNC Symbol;Acc:HGNC:393]
93. PDLIM7 ENSGALG00000026159 4700 0.757 - - 0.757 - - - - - - - PDZ and LIM domain 7 [Source:NCBI gene;Acc:416362]
94. RBM45 ENSGALG00000009202 6057 0.756 - - - - - - - 0.756 - - RNA binding motif protein 45 [Source:NCBI gene;Acc:424132]
95. VPS13D ENSGALG00000034777 2350 0.756 - - 0.756 - - - - - - - vacuolar protein sorting 13 homolog D [Source:HGNC Symbol;Acc:HGNC:23595]
96. CCNI ENSGALG00000011457 3203 0.755 - - 0.755 - - - - - - - cyclin I [Source:HGNC Symbol;Acc:HGNC:1595]
97. PCDH17 ENSGALG00000016941 1006 0.755 - - 0.755 - - - - - - - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
98. UHRF2 ENSGALG00000015052 1268 0.755 - - 0.755 - - - - - - - ubiquitin like with PHD and ring finger domains 2 [Source:HGNC Symbol;Acc:HGNC:12557]
99. PTPN2 ENSGALG00000013867 1128 0.755 - - 0.755 - - - - - - - protein tyrosine phosphatase, non-receptor type 2 [Source:NCBI gene;Acc:396409]
100. AMBRA1 ENSGALG00000008358 2865 0.753 - - 0.753 - - - - - - - autophagy and beclin 1 regulator 1 [Source:HGNC Symbol;Acc:HGNC:25990]

There are 266 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA