Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for PGF

Gene Name Gene ID Reads Annotation
PGF ENSGALG00000026557 33 placental growth factor [Source:HGNC Symbol;Acc:HGNC:8893]











Genes with expression patterns similar to PGF

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PGF ENSGALG00000026557 33 5 - - 1.000 - - 1.000 1.000 1.000 - 1.000 placental growth factor [Source:HGNC Symbol;Acc:HGNC:8893]
2. NRROS 72 1.746 - - 0.797 - - - - 0.949 - - negative regulator of reactive oxygen species, transcript variant X2
3. DAAM1 ENSGALG00000012017 81 1.654 - - - - - - 0.909 0.745 - - Gallus gallus dishevelled associated activator of morphogenesis 1 (DAAM1), mRNA. [Source:RefSeq mRNA;Acc:NM_001322368]
4. WDR19 ENSGALG00000014064 49 1.634 - - 0.722 - - - - 0.912 - - WD repeat domain 19 [Source:HGNC Symbol;Acc:HGNC:18340]
5. NUP160 ENSGALG00000043074 46 1.602 - - 0.804 - - - - 0.798 - - nucleoporin 160 [Source:HGNC Symbol;Acc:HGNC:18017]
6. NRG3 ENSGALG00000042812 10 1 - - - - - - - 1.000 - - neuregulin 3 [Source:HGNC Symbol;Acc:HGNC:7999]
7. DENND2A ENSGALG00000012857 350 1 - - - - - - - 1.000 - - DENN domain containing 2A [Source:HGNC Symbol;Acc:HGNC:22212]
8. FRMPD3 ENSGALG00000028975 3 1 - - - - - - - 1.000 - - FERM and PDZ domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29382]
9. ADPRH ENSGALG00000015473 7 0.999 - - - - - - - 0.999 - - ADP-ribosylarginine hydrolase [Source:NCBI gene;Acc:418452]
10. ENSGALG00000014888 ENSGALG00000014888 3 0.999 - - - - - - - 0.999 - -
11. RUNX1 ENSGALG00000016022 2 0.999 - - - - - - - 0.999 - - runt-related transcription factor 1 [Source:NCBI gene;Acc:396152]
12. TTC29 ENSGALG00000010009 4 0.999 - - - - - - - 0.999 - - tetratricopeptide repeat domain 29 [Source:HGNC Symbol;Acc:HGNC:29936]
13. GUCY1B3 29 0.999 - - - - - - - 0.999 - - guanylate cyclase 1 soluble subunit beta, transcript variant X2
14. TSPAN10 ENSGALG00000004525 6 0.999 - - - - - - - 0.999 - - tetraspanin 10 [Source:HGNC Symbol;Acc:HGNC:29942]
15. PACRG ENSGALG00000011560 67 0.999 - - - - - - - 0.999 - - parkin coregulated [Source:HGNC Symbol;Acc:HGNC:19152]
16. POMGNT1 ENSGALG00000010351 3 0.999 - - - - - - - 0.999 - - protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) [Source:HGNC Symbol;Acc:HGNC:19139]
17. ENSGALG00000027203 ENSGALG00000027203 2 0.999 - - - - - - - 0.999 - -
18. BDKRB2 ENSGALG00000011080 12 0.996 - - - - - - - 0.996 - - bradykinin receptor B2 [Source:NCBI gene;Acc:428906]
19. EXOC6 ENSGALG00000006763 119 0.985 - - - - - - - 0.985 - - exocyst complex component 6 [Source:NCBI gene;Acc:423807]
20. C12orf50 ENSGALG00000045093 9 0.98 - - - - - - - 0.980 - - chromosome 12 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:26665]
21. SERGEF ENSGALG00000006231 35 0.972 - - - - - - - 0.972 - - secretion regulating guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:17499]
22. ENSGALG00000008594 ENSGALG00000008594 54 0.971 - - - - - - - 0.971 - -
23. TTC25 ENSGALG00000003464 70 0.97 - - - - - - - 0.970 - - tetratricopeptide repeat domain 25
24. IGFBP2 ENSGALG00000011469 26 0.97 - - - - - - - 0.970 - - insulin like growth factor binding protein 2 [Source:NCBI gene;Acc:396315]
25. SCUBE3 ENSGALG00000002675 12 0.97 - - - - - - - 0.970 - - signal peptide, CUB domain and EGF like domain containing 3 [Source:HGNC Symbol;Acc:HGNC:13655]
26. BAI1 BAI1 235 0.97 - - - - - - - 0.970 - -
27. SS2 ENSGALG00000003034 277 0.97 - - - - - - - 0.970 - - somatostatin II [Source:NCBI gene;Acc:395106]
28. ENSGALG00000012002 ENSGALG00000012002 4 0.968 - - 0.968 - - - - - - -
29. PDGFRB ENSGALG00000030613 4 0.968 - - 0.968 - - - - - - - platelet derived growth factor receptor beta [Source:HGNC Symbol;Acc:HGNC:8804]
30. DMB1 ENSGALG00000000162 7 0.968 - - 0.968 - - - - - - - major histocompatibility complex, class II, DM beta 1 [Source:NCBI gene;Acc:106182184]
31. GZMM ENSGALG00000015192 8 0.968 - - 0.968 - - - - - - - granzyme M
32. UBAP1 ENSGALG00000021378 11 0.967 - - - - - - - 0.967 - - ubiquitin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:12461]
33. ENSGALG00000019793 ENSGALG00000019793 198 0.956 - - - - - - - 0.956 - -
34. CCNA1 ENSGALG00000017052 23 0.954 - - - - - - - 0.954 - - cyclin A1 [Source:HGNC Symbol;Acc:HGNC:1577]
35. H2B-V H2B-V 24 0.953 - - 0.953 - - - - - - -
36. BDH1B ENSGALG00000006976 9 0.953 - - 0.953 - - - - - - - 3-hydroxybutyrate dehydrogenase, type 1 B, transcript variant X1
37. PTPRR ENSGALG00000010148 93 0.952 - - - - - - - 0.952 - - protein tyrosine phosphatase, receptor type R, transcript variant X4
38. ZFAND6 ENSGALG00000006505 48 0.951 - - - - - - 0.951 - - - zinc finger AN1-type containing 6 [Source:NCBI gene;Acc:415483]
39. LOC418544 ENSGALG00000019175 19 0.951 - - 0.951 - - - - - - - cystathionine beta-synthase-like
40. ZFYVE20 ZFYVE20 132 0.946 - - - - - - - 0.946 - -
41. PTBP3 ENSGALG00000015669 16 0.944 - - 0.944 - - - - - - - polypyrimidine tract binding protein 3 [Source:HGNC Symbol;Acc:HGNC:10253]
42. CD200R1A CD200R1A 105 0.936 - - 0.936 - - - - - - -
43. ZFYVE26 ENSGALG00000028762 18 0.931 - - 0.931 - - - - - - - zinc finger FYVE-type containing 26 [Source:HGNC Symbol;Acc:HGNC:20761]
44. ENSGALG00000000193 ENSGALG00000000193 19 0.925 - - - - - - - 0.925 - -
45. TP53I3 ENSGALG00000016502 178 0.925 - - 0.925 - - - - - - - tumor protein p53 inducible protein 3 [Source:HGNC Symbol;Acc:HGNC:19373]
46. RAD54L ENSGALG00000010356 7 0.922 - - 0.922 - - - - - - - RAD54-like (S. cerevisiae) [Source:NCBI gene;Acc:424611]
47. C9orf96 C9orf96 43 0.922 - - - - - - - 0.922 - -
48. LRRC55 ENSGALG00000029130 21 0.92 - - 0.920 - - - - - - - leucine rich repeat containing 55 [Source:HGNC Symbol;Acc:HGNC:32324]
49. GRIA2 ENSGALG00000009405 275 0.92 - - - - - - - 0.920 - - glutamate ionotropic receptor AMPA type subunit 2 [Source:NCBI gene;Acc:414894]
50. P2RY12 ENSGALG00000036470 20 0.919 - - - - - - - 0.919 - - purinergic receptor P2Y12 [Source:HGNC Symbol;Acc:HGNC:18124]
51. SYN1 SYN1 432 0.918 - - 0.918 - - - - - - -
52. NPDC1 ENSGALG00000042635 12 0.916 - - 0.916 - - - - - - - neural proliferation, differentiation and control 1 [Source:HGNC Symbol;Acc:HGNC:7899]
53. KIAA1430 KIAA1430 440 0.913 - - 0.913 - - - - - - -
54. SPRTN ENSGALG00000011065 24 0.911 - - 0.911 - - - - - - - SprT-like N-terminal domain [Source:HGNC Symbol;Acc:HGNC:25356]
55. WDR52 WDR52 37 0.909 - - - - - - 0.909 - - -
56. P4HTM ENSGALG00000006937 33 0.909 - - - - - - 0.909 - - - prolyl 4-hydroxylase, transmembrane [Source:HGNC Symbol;Acc:HGNC:28858]
57. TRIO ENSGALG00000031495 233 0.909 - - - - - - 0.909 - - - trio Rho guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:12303]
58. IL18RAP ENSGALG00000016788 1 0.909 - - - - - - 0.909 - - - interleukin 18 receptor accessory protein [Source:HGNC Symbol;Acc:HGNC:5989]
59. CALR3 ENSGALG00000003914 8 0.909 - - - - - - 0.909 - - - calreticulin 3 [Source:HGNC Symbol;Acc:HGNC:20407]
60. FAM96A ENSGALG00000026448 41 0.909 - - - - - - 0.909 - - - family with sequence similarity 96 member A [Source:NCBI gene;Acc:415571]
61. BMPR1A ENSGALG00000002003 20 0.909 - - - - - - 0.909 - - - bone morphogenetic protein receptor type 1A [Source:NCBI gene;Acc:396308]
62. MED13L ENSGALG00000008238 27 0.909 - - - - - - 0.909 - - - mediator complex subunit 13 like [Source:HGNC Symbol;Acc:HGNC:22962]
63. ENSGALG00000005511 ENSGALG00000005511 7 0.909 - - - - - - 0.909 - - -
64. ACSS1L ENSGALG00000010225 5 0.909 - - - - - - 0.909 - - - acyl-CoA synthetase short-chain family member 1-like, transcript variant X3
65. FAM184B ENSGALG00000041854 43 0.909 - - - - - - 0.909 - - - family with sequence similarity 184 member B [Source:HGNC Symbol;Acc:HGNC:29235]
66. LOC423752 ENSGALG00000020899 17 0.909 - - - - - - 0.909 - - - uncharacterized LOC423752, transcript variant X1
67. THRB ENSGALG00000011294 7 0.909 - - - - - - 0.909 - - - thyroid hormone receptor beta [Source:NCBI gene;Acc:396431]
68. FBXL16 ENSGALG00000002443 11 0.909 - - - - - - 0.909 - - - F-box and leucine rich repeat protein 16 [Source:NCBI gene;Acc:416405]
69. MGAT3 ENSGALG00000036743 5 0.909 - - - - - - 0.909 - - - mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:418013]
70. VWA5A ENSGALG00000028815 19 0.909 - - - - - - 0.909 - - - von Willebrand factor A domain containing 5A, transcript variant X5
71. CRK ENSGALG00000002656 15 0.909 - - - - - - 0.909 - - - CRK proto-oncogene, adaptor protein [Source:NCBI gene;Acc:107054794]
72. CCDC73 ENSGALG00000012103 17 0.909 - - - - - - 0.909 - - - coiled-coil domain containing 73 [Source:HGNC Symbol;Acc:HGNC:23261]
73. EML5 ENSGALG00000010639 25 0.909 - - - - - - 0.909 - - - echinoderm microtubule associated protein like 5, transcript variant X1
74. SLC22A16 ENSGALG00000015055 21 0.909 - - - - - - 0.909 - - - solute carrier family 22 member 16 [Source:HGNC Symbol;Acc:HGNC:20302]
75. PCGF3 ENSGALG00000015333 7 0.909 - - - - - - 0.909 - - - polycomb group ring finger 3 [Source:HGNC Symbol;Acc:HGNC:10066]
76. PAH ENSGALG00000012754 15 0.909 - - - - - - 0.909 - - - phenylalanine hydroxylase [Source:NCBI gene;Acc:408024]
77. MIER2 ENSGALG00000001108 25 0.909 - - - - - - 0.909 - - - MIER family member 2 [Source:HGNC Symbol;Acc:HGNC:29210]
78. FIP1L1 ENSGALG00000013943 15 0.909 - - - - - - 0.909 - - - factor interacting with PAPOLA and CPSF1, transcript variant X5
79. GALNT9 ENSGALG00000002242 219 0.909 - - - - - - 0.909 - - - polypeptide N-acetylgalactosaminyltransferase 9 [Source:HGNC Symbol;Acc:HGNC:4131]
80. GABRA5 ENSGALG00000016744 12 0.909 - - - - - - 0.909 - - - gamma-aminobutyric acid type A receptor alpha5 subunit [Source:HGNC Symbol;Acc:HGNC:4079]
81. SPG20 22 0.909 - - - - - - 0.909 - - - spastic paraplegia 20 (Troyer syndrome), transcript variant X1
82. TAF5L ENSGALG00000011098 17 0.909 - - - - - - 0.909 - - - TATA-box binding protein associated factor 5 like [Source:HGNC Symbol;Acc:HGNC:17304]
83. CDK19 ENSGALG00000015051 26 0.909 - - - - - - 0.909 - - - cyclin dependent kinase 19 [Source:HGNC Symbol;Acc:HGNC:19338]
84. ZBTB2 ENSGALG00000012966 112 0.903 - - 0.903 - - - - - - - zinc finger and BTB domain containing 2 [Source:NCBI gene;Acc:421635]
85. MPZL1 ENSGALG00000015438 72 0.903 - - 0.903 - - - - - - - myelin protein zero like 1 [Source:HGNC Symbol;Acc:HGNC:7226]
86. ENSGALG00000006277 ENSGALG00000006277 284 0.889 - - 0.889 - - - - - - -
87. TBC1D8 ENSGALG00000016776 42 0.888 - - 0.888 - - - - - - - TBC1 domain family member 8 [Source:HGNC Symbol;Acc:HGNC:17791]
88. KIF5C ENSGALG00000012462 167 0.888 - - - - - - - 0.888 - - kinesin family member 5C [Source:NCBI gene;Acc:408046]
89. THBD ENSGALG00000044442 6 0.887 - - 0.887 - - - - - - - thrombomodulin
90. SH3BP5 ENSGALG00000039337 17 0.886 - - 0.886 - - - - - - - SH3 domain binding protein 5 [Source:NCBI gene;Acc:420682]
91. GNB4 ENSGALG00000008983 26 0.881 - - 0.881 - - - - - - - G protein subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:20731]
92. ADMP ENSGALG00000037408 24 0.876 - - 0.876 - - - - - - - anti-dorsalizing morphogenetic protein [Source:NCBI gene;Acc:395622]
93. CHOBF-1 CHOBF-1 41 0.875 - - 0.875 - - - - - - -
94. LOC428714 ENSGALG00000007530 41 0.873 - - - - - - - 0.873 - - LOC428714, transcript variant X2
95. TCP11 ENSGALG00000002692 11 0.87 - - - - - - - 0.870 - - t-complex 11, transcript variant X3
96. EPHX1 ENSGALG00000009291 46 0.87 - - - - - - - 0.870 - - epoxide hydrolase 1 [Source:HGNC Symbol;Acc:HGNC:3401]
97. TTLL7 ENSGALG00000008850 49 0.869 - - 0.869 - - - - - - - tubulin tyrosine ligase like 7 [Source:HGNC Symbol;Acc:HGNC:26242]
98. STAB2 32 0.866 - - 0.866 - - - - - - - stabilin 2
99. EPGN ENSGALG00000010859 187 0.865 - - 0.865 - - - - - - - epithelial mitogen [Source:NCBI gene;Acc:497270]
100. CXorf22 CXorf22 20 0.865 - - 0.865 - - - - - - -

There are 137 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA