Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for PGD

Gene Name Gene ID Reads Annotation
PGD ENSGALG00000002797 15115 phosphogluconate dehydrogenase [Source:NCBI gene;Acc:419450]











Genes with expression patterns similar to PGD

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. PGD ENSGALG00000002797 15115 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 phosphogluconate dehydrogenase [Source:NCBI gene;Acc:419450]
2. ITGA9 ENSGALG00000029378 415 1.835 - - - 0.873 - - - - - 0.962 integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
3. INTS10 ENSGALG00000010130 6320 1.83 - - - 0.873 - - - - - 0.957 integrator complex subunit 10 [Source:NCBI gene;Acc:422489]
4. PPFIA1 ENSGALG00000035774 5258 1.827 - - - 0.891 - - - - - 0.936 PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
5. ASB9 ENSGALG00000016563 2780 1.762 - - - 0.824 - - - - - 0.938 ankyrin repeat and SOCS box containing 9 [Source:NCBI gene;Acc:418625]
6. CNTRL ENSGALG00000001513 1773 1.736 - - - 0.780 - - - - - 0.956 centriolin [Source:NCBI gene;Acc:417121]
7. PRDM4 ENSGALG00000012619 876 1.735 - - - 0.865 - - - - - 0.870 PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
8. RER1 ENSGALG00000021683 9074 1.731 - - - - - - 0.805 - - 0.926 retention in endoplasmic reticulum sorting receptor 1 [Source:NCBI gene;Acc:419397]
9. SSR2 ENSGALG00000000764 32190 1.719 - - - 0.767 - - - - - 0.952 signal sequence receptor subunit 2 [Source:NCBI gene;Acc:425656]
10. GPX8 ENSGALG00000026704 4497 1.711 - - - - - - 0.820 - - 0.891 glutathione peroxidase 8 (putative) [Source:HGNC Symbol;Acc:HGNC:33100]
11. GTF2F2 ENSGALG00000016974 7524 1.695 - - - 0.830 - - - - - 0.865 general transcription factor IIF subunit 2 [Source:HGNC Symbol;Acc:HGNC:4653]
12. PWP1 ENSGALG00000012631 10536 1.693 - - - - - - 0.786 - - 0.907 PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
13. ASAP2 ENSGALG00000016419 1393 1.671 - - - - - - 0.722 - - 0.949 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
14. RHOT1 ENSGALG00000003397 5149 1.666 - - - - - - 0.735 - - 0.931 ras homolog family member T1 [Source:NCBI gene;Acc:417410]
15. PCNP ENSGALG00000015330 15750 1.655 - - - - - - 0.710 - - 0.945 PEST proteolytic signal containing nuclear protein [Source:NCBI gene;Acc:418398]
16. FREM3 ENSGALG00000020561 1824 1.654 - - - - - - 0.700 - - 0.954 FRAS1 related extracellular matrix 3
17. PANK1 ENSGALG00000006431 2910 1.649 - - - 0.872 - - 0.777 - - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]
18. SNW1 ENSGALG00000010501 17767 1.648 - - - 0.763 - - - - - 0.885 SNW domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16696]
19. RAB20 ENSGALG00000016844 3250 1.646 - - - 0.784 - - - - - 0.862 RAB20, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18260]
20. SMC5 ENSGALG00000015118 1799 1.64 - - - 0.794 - - - - - 0.846 structural maintenance of chromosomes 5 [Source:NCBI gene;Acc:431608]
21. RNF8 ENSGALG00000023256 5495 1.627 - - - 0.813 - - 0.814 - - - ring finger protein 8 [Source:HGNC Symbol;Acc:HGNC:10071]
22. CASP8AP2 ENSGALG00000015611 5657 1.617 - - - - - - 0.706 - - 0.911 caspase 8 associated protein 2 [Source:HGNC Symbol;Acc:HGNC:1510]
23. ATG16L1 ENSGALG00000001619 3562 1.612 - - - 0.702 - - - - - 0.910 autophagy related 16 like 1 [Source:HGNC Symbol;Acc:HGNC:21498]
24. NEK7 ENSGALG00000002216 4532 1.608 - - - 0.828 - - 0.780 - - - NIMA related kinase 7 [Source:NCBI gene;Acc:424350]
25. RPL22 ENSGALG00000000719 74238 1.602 - - - - - - 0.817 - - 0.785 ribosomal protein L22 [Source:NCBI gene;Acc:373937]
26. TXNDC12 ENSGALG00000010569 13822 1.594 - - - - - - 0.836 - - 0.758 thioredoxin domain containing 12 [Source:NCBI gene;Acc:772208]
27. PTP4A2 ENSGALG00000003265 24826 1.586 - - - - - - 0.733 - - 0.853 protein tyrosine phosphatase type IVA, member 2 [Source:HGNC Symbol;Acc:HGNC:9635]
28. FTD FTD 3041 1.585 - - - 0.819 - - - - - 0.766
29. EIF2B2 ENSGALG00000010301 10772 1.583 - - - - - - 0.814 - - 0.769 eukaryotic translation initiation factor 2B subunit beta [Source:NCBI gene;Acc:423359]
30. TCOF1 ENSGALG00000005535 24554 1.578 - - - - - 0.707 - - - 0.871 treacle ribosome biogenesis factor 1 [Source:NCBI gene;Acc:416276]
31. KCNK5 ENSGALG00000034077 3233 1.575 - - - 0.831 - - - - - 0.744 potassium two pore domain channel subfamily K member 5 [Source:HGNC Symbol;Acc:HGNC:6280]
32. HS2ST1 ENSGALG00000028423 4153 1.57 - - - 0.724 - - - - - 0.846 heparan sulfate 2-O-sulfotransferase 1 [Source:NCBI gene;Acc:395140]
33. USP5 ENSGALG00000014525 21883 1.569 - - - 0.773 - - 0.796 - - - ubiquitin specific peptidase 5 [Source:HGNC Symbol;Acc:HGNC:12628]
34. SERINC1 ENSGALG00000014868 12484 1.568 - - - - - - 0.739 - - 0.829 serine incorporator 1 [Source:NCBI gene;Acc:421722]
35. VAPB ENSGALG00000007549 15511 1.566 - - - - - - 0.836 - - 0.730 VAMP associated protein B and C [Source:NCBI gene;Acc:419317]
36. ADIPOR2 ENSGALG00000035533 6523 1.562 - - - - - - 0.796 - - 0.766 adiponectin receptor 2 [Source:NCBI gene;Acc:418155]
37. PNRC2 ENSGALG00000004122 19228 1.557 - - - - - - 0.712 - - 0.845 proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
38. MYEOV2 MYEOV2 5155 1.552 - - - - - - 0.723 - - 0.829
39. COG7 ENSGALG00000006156 4072 1.551 - - - 0.811 - - 0.740 - - - component of oligomeric golgi complex 7 [Source:NCBI gene;Acc:416578]
40. SLC25A3 ENSGALG00000011514 62606 1.549 - - - 0.833 - - 0.716 - - - solute carrier family 25 member 3 [Source:NCBI gene;Acc:417924]
41. HNRNPLL ENSGALG00000008504 14719 1.542 - - - - - - 0.713 - - 0.829 heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]
42. EXOC3 ENSGALG00000013397 4365 1.541 - - - 0.765 - - 0.776 - - - exocyst complex component 3 [Source:NCBI gene;Acc:420987]
43. C1H2ORF49 ENSGALG00000016796 2976 1.525 - - - 0.773 - - 0.752 - - - chromosome 1 open reading frame, human C2orf49 [Source:NCBI gene;Acc:418725]
44. TMA16 ENSGALG00000009501 6651 1.52 - - - - - - 0.758 - - 0.762 translation machinery associated 16 homolog [Source:HGNC Symbol;Acc:HGNC:25638]
45. LDB2 ENSGALG00000014485 22490 1.517 - - - - - - 0.705 - - 0.812 LIM domain binding 2 [Source:NCBI gene;Acc:395631]
46. RCN2 ENSGALG00000039284 17848 1.515 - - - 0.746 - - 0.769 - - - reticulocalbin 2 [Source:NCBI gene;Acc:415350]
47. TBPL1 ENSGALG00000013981 3710 1.512 - - - - - - 0.702 - - 0.810 TATA-box binding protein like 1 [Source:NCBI gene;Acc:395517]
48. BCL9 ENSGALG00000037655 4620 1.508 - - - - - - 0.709 - - 0.799 B cell CLL/lymphoma 9 [Source:HGNC Symbol;Acc:HGNC:1008]
49. ADAR ENSGALG00000021475 6004 1.507 - - - 0.721 - - 0.786 - - - adenosine deaminase, RNA specific [Source:HGNC Symbol;Acc:HGNC:225]
50. PPP2R5C ENSGALG00000029996 5759 1.487 - - - - - - 0.728 - - 0.759 protein phosphatase 2 regulatory subunit B'gamma [Source:NCBI gene;Acc:423460]
51. WDR75 ENSGALG00000045237 9484 1.486 - - - - - - 0.785 - - 0.701 WD repeat domain 75
52. PSMA2 ENSGALG00000039387 23620 1.462 - - - 0.725 - - 0.737 - - - proteasome subunit alpha 2 [Source:NCBI gene;Acc:420772]
53. ARL6IP1 ENSGALG00000006780 16471 1.461 - - 0.718 - - - 0.743 - - - ADP ribosylation factor like GTPase 6 interacting protein 1 [Source:NCBI gene;Acc:416604]
54. KDM4A ENSGALG00000010074 7219 1.456 - - - - - - 0.751 - - 0.705 lysine demethylase 4A
55. PARVB ENSGALG00000014201 27559 1.429 - - - 0.724 - - - - - 0.705 parvin beta [Source:HGNC Symbol;Acc:HGNC:14653]
56. GLO1 ENSGALG00000010127 31662 1.423 - - - - - - 0.704 - - 0.719 glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
57. MB21D1 2460 0.973 - - - - - - - - - 0.973 Mab-21 domain containing 1
58. RWDD2B ENSGALG00000015807 3601 0.972 - - - - - - - - - 0.972 RWD domain containing 2B [Source:HGNC Symbol;Acc:HGNC:1302]
59. RAD50 ENSGALG00000006794 4308 0.971 - - - - - - - - - 0.971 RAD50 double strand break repair protein, transcript variant X4
60. KMT2C 6306 0.969 - - - - - - - - - 0.969 lysine methyltransferase 2C, transcript variant X14
61. TANGO2 ENSGALG00000002056 1971 0.968 - - - - - - - - - 0.968 transport and golgi organization 2 homolog [Source:NCBI gene;Acc:416784]
62. MTSS1 ENSGALG00000041969 1312 0.968 - - - - - - - - - 0.968 MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
63. CPNE1 ENSGALG00000040856 610 0.967 - - - - - - - - - 0.967 copine 1 [Source:NCBI gene;Acc:419134]
64. C14orf80 C14orf80 1921 0.967 - - - - - - - - - 0.967
65. DIAPH3 ENSGALG00000016937 1069 0.966 - - - - - - - - - 0.966 diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]
66. TP53BP1 ENSGALG00000042201 708 0.966 - - - - - - - - - 0.966 tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11999]
67. NARS ENSGALG00000040506 9506 0.966 - - - - - - - - - 0.966 asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
68. FSTL4 ENSGALG00000031487 529 0.965 - - - - - - - - - 0.965 follistatin like 4 [Source:NCBI gene;Acc:395163]
69. PROM1 ENSGALG00000014496 2494 0.965 - - - - - - - - - 0.965 prominin 1 [Source:NCBI gene;Acc:422825]
70. ITSN2 ENSGALG00000016504 651 0.964 - - - - - - - - - 0.964 intersectin 2 [Source:HGNC Symbol;Acc:HGNC:6184]
71. MPP5 ENSGALG00000009581 724 0.964 - - - - - - - - - 0.964 membrane palmitoylated protein 5 [Source:NCBI gene;Acc:423281]
72. MSI1 ENSGALG00000007227 2279 0.963 - - - - - - - - - 0.963 musashi RNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:7330]
73. 5S_2 5S_2 58 0.963 - - - - - - - - - 0.963
74. PREX2 ENSGALG00000042354 134 0.963 - - - - - - - - - 0.963 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2
75. FAM190B FAM190B 165 0.963 - - - - - - - - - 0.963
76. SSH1 ENSGALG00000004928 222 0.963 - - - - - - - - - 0.963 slingshot protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:30579]
77. WDSUB1 ENSGALG00000012574 2038 0.963 - - - - - - - - - 0.963 WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
78. IL10R2 IL10R2 72 0.963 - - - - - - - - - 0.963
79. AURKA ENSGALG00000007768 793 0.962 - - - - - - - - - 0.962 aurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]
80. AGGF1 ENSGALG00000004311 3011 0.962 - - - - - - - - - 0.962 angiogenic factor with G-patch and FHA domains 1, transcript variant X1
81. CPNE2 ENSGALG00000001316 236 0.962 - - - - - - - - - 0.962 copine 2 [Source:NCBI gene;Acc:415646]
82. ZNF6 ZNF6 138 0.962 - - - - - - - - - 0.962
83. TRPC4AP ENSGALG00000003147 3967 0.962 - - - - - - - - - 0.962 transient receptor potential cation channel subfamily C member 4 associated protein [Source:NCBI gene;Acc:428134]
84. SOX6 ENSGALG00000006074 102 0.962 - - - - - - - - - 0.962 Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]
85. CXADR ENSGALG00000015701 96 0.961 - - - - - - - - - 0.961 coxsackie virus and adenovirus receptor, transcript variant X2
86. PCLO 249 0.961 - - - - - - - - - 0.961 piccolo presynaptic cytomatrix protein
87. APBA3 ENSGALG00000000740 1249 0.961 - - - - - - - - - 0.961 amyloid beta precursor protein binding family A member 3 [Source:HGNC Symbol;Acc:HGNC:580]
88. ARHGAP21 ENSGALG00000007721 3961 0.961 - - - - - - - - - 0.961 Rho GTPase activating protein 21 [Source:NCBI gene;Acc:420500]
89. RTN4R ENSGALG00000007732 1515 0.96 - - - - - - - - - 0.960 reticulon 4 receptor
90. ZNF106 ENSGALG00000009081 1520 0.96 - - - - - - - - - 0.960 zinc finger protein 106 [Source:HGNC Symbol;Acc:HGNC:12886]
91. MYOCD ENSGALG00000001021 351 0.96 - - - - - - - - - 0.960 myocardin [Source:NCBI gene;Acc:427790]
92. BRD1 ENSGALG00000029379 6047 0.96 - - - - - - - - - 0.960 bromodomain containing 1 [Source:NCBI gene;Acc:417731]
93. C10orf118 C10orf118 762 0.96 - - - - - - - - - 0.960
94. FAM129A ENSGALG00000004812 269 0.959 - - - - - - - - - 0.959 family with sequence similarity 129 member A [Source:NCBI gene;Acc:424451]
95. CRYM ENSGALG00000002484 3558 0.959 - - - - - - - - - 0.959 crystallin mu [Source:HGNC Symbol;Acc:HGNC:2418]
96. PPM1E ENSGALG00000005061 2606 0.958 - - - - - - - - - 0.958 protein phosphatase, Mg2+/Mn2+ dependent 1E [Source:HGNC Symbol;Acc:HGNC:19322]
97. FRMD3 ENSGALG00000012577 999 0.957 - - - - - - - - - 0.957 FERM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24125]
98. CASKIN1 604 0.957 - - - - - - - - - 0.957 CASK interacting protein 1, transcript variant X4
99. PM20D2 ENSGALG00000015779 1301 0.957 - - - - - - - - - 0.957 peptidase M20 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21408]
100. CCDC88A ENSGALG00000043587 2208 0.957 - - - - - - - - - 0.957 coiled-coil domain containing 88A [Source:HGNC Symbol;Acc:HGNC:25523]

There are 964 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA