Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for PGBD4_4

Gene Name Gene ID Reads Annotation
PGBD4_4 PGBD4_4 15










Genes with expression patterns similar to PGBD4_4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. PGBD4_4 PGBD4_4 15 7 1.000 1.000 - - 1.000 1.000 1.000 1.000 1.000
2. ENSDARG00000092910 ENSDARG00000092910 44 2.602 1.000 - - - - 0.808 0.794 - -
3. si:dkeyp-3f10.17 ENSDARG00000087254 1 2 - - - - - 1.000 1.000 - - si:dkeyp-3f10.17 [Source:ZFIN;Acc:ZDB-GENE-081104-467]
4. slc35f3a ENSDARG00000075909 1 2 - 1.000 - - - 1.000 - - - solute carrier family 35, member F3a [Source:ZFIN;Acc:ZDB-GENE-080204-20]
5. top3b ENSDARG00000027586 8 2 - - - - - 1.000 1.000 - - DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
6. zgc:171551 ENSDARG00000073708, ENSDARG00000111940 24 2 - - - - - 1.000 1.000 - - zgc:171551 [Source:ZFIN;Acc:ZDB-GENE-080220-8]
7. si:ch211-233h19.2 ENSDARG00000042213 47 2 1.000 - - - - - 1.000 - - si:ch211-233h19.2 [Source:ZFIN;Acc:ZDB-GENE-061009-14]
8. fgf10b ENSDARG00000100475 17 1.976 - 1.000 - - - - 0.976 - - fibroblast growth factor 10b [Source:ZFIN;Acc:ZDB-GENE-060828-1]
9. CR854923.1 CR854923.1 18 1.958 - 1.000 - - - - 0.958 - -
10. drd4-rs ENSDARG00000001912 45 1.943 - 1.000 - - - - 0.943 - - dopamine receptor D4 related sequence [Source:ZFIN;Acc:ZDB-GENE-051113-172]
11. QSOX2 ENSDARG00000077174 26 1.911 - 1.000 - - - - 0.911 - - quiescin Q6 sulfhydryl oxidase 2 [Source:ZFIN;Acc:ZDB-GENE-110203-4]
12. CU672227.1 ENSDARG00000105807 15 1.871 0.871 - - - - - 1.000 - -
13. EPHB1 ENSDARG00000076757 20 1.871 0.871 - - - - 1.000 - - - EPH receptor B1 [Source:ZFIN;Acc:ZDB-GENE-070912-219]
14. si:dkey-148e22.3 si:dkey-148e22.3 4 1.871 0.871 - - - - - 1.000 - -
15. CABZ01070007.1 CABZ01070007.1 5 1.871 0.871 1.000 - - - - - - -
16. CECR6 25 1.871 0.871 - - - - - 1.000 - - cat eye syndrome chromosome region, candidate 6
17. zgc:163077 ENSDARG00000101593 60 1.871 0.871 1.000 - - - - - - - zgc:163077 [Source:ZFIN;Acc:ZDB-GENE-070521-6]
18. cpeb4 cpeb4 57 1.869 1.000 0.869 - - - - - - -
19. nub1 ENSDARG00000061417 33 1.858 - - - - - 0.954 0.904 - - negative regulator of ubiquitin-like proteins 1 [Source:ZFIN;Acc:ZDB-GENE-080212-11]
20. si:dkey-177p2.18 ENSDARG00000091633 91 1.853 0.853 1.000 - - - - - - - si:dkey-177p2.18 [Source:ZFIN;Acc:ZDB-GENE-130603-12]
21. trmt2b ENSDARG00000033967 127 1.845 0.871 0.974 - - - - - - - tRNA methyltransferase 2 homolog B [Source:ZFIN;Acc:ZDB-GENE-050809-101]
22. CU041398.1 CU041398.1 17 1.814 - - - - 0.814 1.000 - - -
23. SLC4A8 ENSDARG00000015531 16 1.812 - 0.812 - - - 1.000 - - - solute carrier family 4, sodium bicarbonate cotransporter, member 8 [Source:ZFIN;Acc:ZDB-GENE-131119-88]
24. si:ch211-283l16.1 ENSDARG00000112586 131 1.808 - 0.808 - - - - 1.000 - - si:ch211-283l16.1 [Source:ZFIN;Acc:ZDB-GENE-110913-44]
25. si:ch211-63o20.7 ENSDARG00000042000 93 1.804 0.871 - - - - - 0.933 - - si:ch211-63o20.7 [Source:ZFIN;Acc:ZDB-GENE-041001-194]
26. CABZ01054391.1 ENSDARG00000103952 2 1.799 - - - - 0.799 1.000 - - - NACHT, LRR and PYD domains-containing protein 12-like [Source:NCBI gene;Acc:100150280]
27. BX957311.1 ENSDARG00000097710 1 1.799 - 1.000 - - 0.799 - - - -
28. npffr1l3 ENSDARG00000010712 18 1.797 - - - - 0.797 - 1.000 - - neuropeptide FF receptor 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-070424-44]
29. ubn1 ENSDARG00000063169, ENSDARG00000115275 32 1.786 0.942 - - - - 0.844 - - - ubinuclein 1 [Source:ZFIN;Acc:ZDB-GENE-070928-28]
30. si:ch211-237l4.6 ENSDARG00000056915 49 1.785 - - - - - 0.871 0.914 - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
31. paqr7a ENSDARG00000100462 15 1.785 0.871 - - - - - 0.914 - - progestin and adipoQ receptor family member VII, a [Source:ZFIN;Acc:ZDB-GENE-070705-346]
32. CHD6 ENSDARG00000017244 219 1.785 0.785 - - - - 1.000 - - - chromodomain helicase DNA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-130530-559]
33. si:ch211-229i14.2 ENSDARG00000086048 19 1.783 - 1.000 - - - 0.783 - - - si:ch211-229i14.2 [Source:ZFIN;Acc:ZDB-GENE-070705-123]
34. rhot1b ENSDARG00000103313, ENSDARG00000109702, ENSDARG00000114871 44 1.771 - 0.771 - - - 1.000 - - - ras homolog family member T1 [Source:ZFIN;Acc:ZDB-GENE-061009-52]
35. lonrf1 ENSDARG00000075048 13 1.764 - - - - - 1.000 - 0.764 - LON peptidase N-terminal domain and ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-101021-4]
36. rapgef5b ENSDARG00000074307 112 1.733 - 1.000 - - - - 0.733 - - Rap guanine nucleotide exchange factor (GEF) 5b [Source:ZFIN;Acc:ZDB-GENE-061215-2]
37. FP085391.2 FP085391.2 85 1.727 0.871 - - - - - 0.856 - -
38. si:dkey-20i20.12 si:dkey-20i20.12 7 1.724 - 1.000 - - - - - - 0.724
39. hmx4 ENSDARG00000007941, ENSDARG00000115000, ENSDARG00000116208 447 1.717 0.717 - - - - 1.000 - - - H6 family homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060825-142]
40. trpm1a ENSDARG00000011259, ENSDARG00000111200, ENSDARG00000112747 48 1.715 0.871 - - - - 0.844 - - - transient receptor potential cation channel, subfamily M, member 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1372]
41. si:ch211-59h6.1 ENSDARG00000013022 193 1.697 - 0.815 - - - - 0.882 - - si:ch211-59h6.1 [Source:ZFIN;Acc:ZDB-GENE-091204-418]
42. map3k8 ENSDARG00000061710 76 1.686 0.871 0.815 - - - - - - - mitogen-activated protein kinase kinase kinase 8 [Source:ZFIN;Acc:ZDB-GENE-100316-8]
43. CR388046.3 ENSDARG00000105537 108 1.68 0.824 - - - - - 0.856 - -
44. itga2.1 ENSDARG00000069390 6 1.671 - 0.943 - - - - - - 0.728 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-111011-4]
45. dclre1a ENSDARG00000091768 94 1.65 0.819 - - - - - 0.831 - - DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-124]
46. HIST1H2BA ENSDARG00000116654 10 1.635 0.871 - - - - - - 0.764 - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
47. si:dkey-240n22.6 ENSDARG00000089296, ENSDARG00000106998 3 1.635 0.871 - - - - - - 0.764 - si:dkey-240n22.6 [Source:ZFIN;Acc:ZDB-GENE-070705-411]
48. ifih1 ENSDARG00000018553 8 1.625 - 0.802 - - - - 0.823 - - interferon induced with helicase C domain 1 [Source:ZFIN;Acc:ZDB-GENE-081104-438]
49. CR942805.1 CR942805.1 94 1.623 - 0.815 - - - 0.808 - - -
50. si:dkey-86e18.1 ENSDARG00000043536 75 1.621 - - - - - 0.717 0.904 - - si:dkey-86e18.1 [Source:ZFIN;Acc:ZDB-GENE-041014-18]
51. SLC38A8 SLC38A8 17 1.601 - 0.802 - - - 0.799 - - -
52. zgc:174654 zgc:174654 54 1.586 0.778 0.808 - - - - - - -
53. si:dkey-165i8.5 si:dkey-165i8.5 21 1.581 - - - - - 0.808 0.773 - -
54. si:dkey-4m13.3 6 1.579 0.871 - - - 0.708 - - - - si:dkey-4m13.3
55. chrna2b ENSDARG00000057025 217 1.57 0.773 - - - - 0.797 - - - cholinergic receptor, nicotinic, alpha 2b (neuronal) [Source:ZFIN;Acc:ZDB-GENE-041001-99]
56. NLRC5 ENSDARG00000024631 11 1.565 0.720 - - - - - 0.845 - - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
57. P2RY13 ENSDARG00000069944 11 1.499 - - - - 0.784 - 0.715 - - purinergic receptor P2Y13 [Source:ZFIN;Acc:ZDB-GENE-110208-5]
58. CR847511.1 CR847511.1 80 1.487 0.742 - - - - - 0.745 - -
59. si:ch1073-228p2.2 si:ch1073-228p2.2 24 1.41 0.707 0.703 - - - - - - -
60. ctdnep1b ENSDARG00000035781 65 1 - - - - - 1.000 - - - CTD nuclear envelope phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-041114-152]
61. BX323836.1 BX323836.1 1 1 - - - - - - 1.000 - -
62. slc8a2a ENSDARG00000008912, ENSDARG00000116797 12 1 - 1.000 - - - - - - - solute carrier family 8 (sodium/calcium exchanger), member 2a [Source:ZFIN;Acc:ZDB-GENE-060531-155]
63. creb5b ENSDARG00000070536 9 1 - 1.000 - - - - - - - cAMP responsive element binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-091020-6]
64. ZC3H12A ENSDARG00000005271 5 1 - - - - - - 1.000 - - zinc finger CCCH-type containing 12A [Source:ZFIN;Acc:ZDB-GENE-110411-6]
65. tmem176l.2 ENSDARG00000089399 22 1 - - - - - 1.000 - - - transmembrane protein 176l.2 [Source:ZFIN;Acc:ZDB-GENE-080829-12]
66. si:ch211-79g12.1 ENSDARG00000116692 2 1 - 1.000 - - - - - - - si:ch211-79g12.1 [Source:ZFIN;Acc:ZDB-GENE-110914-69]
67. si:dkey-7i4.1 ENSDARG00000086897 2 1 - 1.000 - - - - - - - si:dkey-7i4.1 [Source:ZFIN;Acc:ZDB-GENE-081028-64]
68. cplx3a ENSDARG00000062508, ENSDARG00000099196, ENSDARG00000112735 58 1 - - - - - 1.000 - - - complexin 3a [Source:ZFIN;Acc:ZDB-GENE-090313-349]
69. si:ch211-244b2.4 ENSDARG00000045530 32 1 - - - - - 1.000 - - - si:ch211-244b2.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8699]
70. HIST1H4B HIST1H4B 21 1 1.000 - - - - - - - -
71. si:dkey-208n4.1 si:dkey-208n4.1 10 1 - - - - - 1.000 - - -
72. zgc:171544 zgc:171544 11 1 - 1.000 - - - - - - -
73. CU104716.2 CU104716.2 10 1 - - - - - - 1.000 - -
74. cnnm4 cnnm4 2 1 - 1.000 - - - - - - -
75. cabp7b ENSDARG00000060846 5 1 - - - - - 1.000 - - - calcium binding protein 7b [Source:ZFIN;Acc:ZDB-GENE-060526-366]
76. zp2.5 ENSDARG00000086522 15 1 - - - - - - 1.000 - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
77. sumo2a ENSDARG00000104390 4 1 - 1.000 - - - - - - - small ubiquitin-like modifier 2a [Source:ZFIN;Acc:ZDB-GENE-120215-155]
78. CLDND1_1 CLDND1_1 50 1 - 1.000 - - - - - - -
79. neurod2 ENSDARG00000016854 6 1 - 1.000 - - - - - - - neurogenic differentiation 2 [Source:ZFIN;Acc:ZDB-GENE-010608-3]
80. CU915534.1 ENSDARG00000105830 1 1 - - - - - 1.000 - - -
81. il11a ENSDARG00000037859 5 1 - - - - - - 1.000 - - interleukin 11a [Source:ZFIN;Acc:ZDB-GENE-051019-1]
82. oxgr1a.1 ENSDARG00000033684 24 1 - 1.000 - - - - - - - oxoglutarate (alpha-ketoglutarate) receptor 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060421-6734]
83. ABR ENSDARG00000095180 4 1 - 1.000 - - - - - - - ABR, RhoGEF and GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-070705-146]
84. pth2r ENSDARG00000006678, ENSDARG00000112414 46 1 - - - - - - 1.000 - - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]
85. cyp11a1 ENSDARG00000002347, ENSDARG00000111941 209 1 - - - - - - 1.000 - - cytochrome P450, family 11, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-010306-1]
86. zgc:162144 ENSDARG00000037603, ENSDARG00000109982 11 1 1.000 - - - - - - - - zgc:162144 [Source:ZFIN;Acc:ZDB-GENE-030131-7630]
87. PBRM1 ENSDARG00000003877 225 1 - 1.000 - - - - - - - polybromo 1 [Source:ZFIN;Acc:ZDB-GENE-080926-4]
88. ptprdb ENSDARG00000019945 48 1 1.000 - - - - - - - - protein tyrosine phosphatase, receptor type, D, b [Source:ZFIN;Acc:ZDB-GENE-070615-38]
89. tlr20al tlr20al 0 1 - - - - - 1.000 - - -
90. sema3bl ENSDARG00000007560, ENSDARG00000110211 30 1 - 1.000 - - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3bl [Source:ZFIN;Acc:ZDB-GENE-030131-2956]
91. psma6l ENSDARG00000043899 3 1 - 1.000 - - - - - - - proteasome subunit alpha 6, like [Source:ZFIN;Acc:ZDB-GENE-010502-2]
92. BX649417.1 ENSDARG00000117387 1 1 - 1.000 - - - - - - -
93. smad6b ENSDARG00000031763 12 1 - - - - - - 1.000 - - SMAD family member 6b [Source:ZFIN;Acc:ZDB-GENE-050419-198]
94. si:ch73-249k16.1 si:ch73-249k16.1 36 1 - - - - - 1.000 - - -
95. AL935186.3 ENSDARG00000109223 19 1 - - - - - 1.000 - - -
96. CR848836.6 CR848836.6 93 1 1.000 - - - - - - - -
97. si:ch211-76l23.4 ENSDARG00000096242 202 1 - - - - - 1.000 - - - si:ch211-76l23.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8310]
98. zgc:136908 ENSDARG00000011983 97 1 - 1.000 - - - - - - - zgc:136908 [Source:ZFIN;Acc:ZDB-GENE-060312-22]
99. EGR4_1 EGR4_1 14 1 - 1.000 - - - - - - -
100. or106-10 ENSDARG00000091143, ENSDARG00000111913, ENSDARG00000114806 1 1 - - - - - - 1.000 - - odorant receptor, family G, subfamily 106, member 10 [Source:ZFIN;Acc:ZDB-GENE-070806-62]

There are 1273 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA